RNA–Protein interactions for RNA: ENST00000497044.5

SHTN1-206, Transcript of shootin 1, humanhuman

TSL 2

Gene SHTN1, Length 3,647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-206ENST00000497044 AEBP2Q6ZN18 517 aaPredicted RBP10.75□□□□□ -0.69
SHTN1-206ENST00000497044 CHIC1Q5VXU3 224 aa10.73□□□□□ -0.69
SHTN1-206ENST00000497044 PHF23Q9BUL5 403 aaPredicted RBP9.64□□□□□ -0.87
SHTN1-206ENST00000497044 SENP3Q9H4L4 574 aaPredicted RBP8.74□□□□□ -1.01
SHTN1-206ENST00000497044 PLPPR3Q6T4P5 718 aa8.65□□□□□ -1.03
SHTN1-206ENST00000497044 NISCHQ9Y2I1 1504 aa8.34□□□□□ -1.07
SHTN1-206ENST00000497044 PPP6R1Q9UPN7 881 aa8.24□□□□□ -1.09
SHTN1-206ENST00000497044 FOXD1Q16676 465 aa8.22□□□□□ -1.09
SHTN1-206ENST00000497044 ADRA2BP18089 450 aa8.2□□□□□ -1.1
SHTN1-206ENST00000497044 CCDC180Q9P1Z9 1646 aa7.98□□□□□ -1.13
SHTN1-206ENST00000497044 DNAJC5BQ9UF47 199 aa7.97□□□□□ -1.13
SHTN1-206ENST00000497044 KCNA4P22459 653 aa7.92□□□□□ -1.14
SHTN1-206ENST00000497044 PPP4R3CPQ6ZMV5 832 aa7.68□□□□□ -1.18
SHTN1-206ENST00000497044 CSRNP3Q8WYN3 585 aa7.67□□□□□ -1.18
SHTN1-206ENST00000497044 NPM3O75607 178 aaKnown RBP7.58□□□□□ -1.2
SHTN1-206ENST00000497044 ZBTB22O15209 634 aa7.57□□□□□ -1.2
SHTN1-206ENST00000497044 SHROOM4Q9ULL8 1493 aa7.55□□□□□ -1.2
SHTN1-206ENST00000497044 MYO15BQ96JP2 1530 aa7.53□□□□□ -1.2
SHTN1-206ENST00000497044 PIAS4Q8N2W9 510 aaPredicted RBP7.5□□□□□ -1.21
SHTN1-206ENST00000497044 RB1CC1Q8TDY2 1594 aa7.45□□□□□ -1.22
SHTN1-206ENST00000497044 NACADO15069 1562 aa7.44□□□□□ -1.22
SHTN1-206ENST00000497044 CNKSR2Q8WXI2 1034 aa7.44□□□□□ -1.22
SHTN1-206ENST00000497044 SLC4A1APQ9BWU0 796 aaKnown RBP7.42□□□□□ -1.22
SHTN1-206ENST00000497044 NCBP3Q53F19 620 aaKnown RBP7.38□□□□□ -1.23
SHTN1-206ENST00000497044 ABCC9O60706 1549 aa7.38□□□□□ -1.23
SHTN1-206ENST00000497044 EHMT2Q96KQ7 1210 aa7.34□□□□□ -1.23
SHTN1-206ENST00000497044 HOXD11P31277 338 aaPredicted RBP7.34□□□□□ -1.23
SHTN1-206ENST00000497044 RNF216Q9NWF9 866 aaPredicted RBP7.32□□□□□ -1.24
SHTN1-206ENST00000497044 MSH5O43196 834 aa7.28□□□□□ -1.24
SHTN1-206ENST00000497044 DCAF1Q9Y4B6 1507 aa7.27□□□□□ -1.25
SHTN1-206ENST00000497044 UNC13AQ9UPW8 1703 aa7.26□□□□□ -1.25
SHTN1-206ENST00000497044 MAPK8IP2Q13387 824 aaPredicted RBP7.23□□□□□ -1.25
SHTN1-206ENST00000497044 DMRT2Q9Y5R5 561 aa7.23□□□□□ -1.25
SHTN1-206ENST00000497044 SLC4A2P04920 1241 aa7.23□□□□□ -1.25
SHTN1-206ENST00000497044 BICRAQ9NZM4 1560 aa7.16□□□□□ -1.26
SHTN1-206ENST00000497044 FOXD4L1Q9NU39 408 aa7.14□□□□□ -1.27
SHTN1-206ENST00000497044 SCAF1Q9H7N4 1312 aaKnown RBP7.13□□□□□ -1.27
SHTN1-206ENST00000497044 ATXN8OSP0DMR3 200 aa7.09□□□□□ -1.27
SHTN1-206ENST00000497044 CUX2O14529 1486 aa6.98□□□□□ -1.29
SHTN1-206ENST00000497044 CC2D2AQ9P2K1 1620 aa6.96□□□□□ -1.3
SHTN1-206ENST00000497044 EIF4G1Q04637 1599 aaKnown RBP6.94□□□□□ -1.3
SHTN1-206ENST00000497044 ZCCHC6Q5VYS8 1495 aaKnown RBP6.93□□□□□ -1.3
SHTN1-206ENST00000497044 PROM2Q8N271 834 aa6.9□□□□□ -1.31
SHTN1-206ENST00000497044 ATF5Q9Y2D1 282 aaPredicted RBP6.88□□□□□ -1.31
SHTN1-206ENST00000497044 MYCNP04198 464 aaPredicted RBP6.87□□□□□ -1.31
SHTN1-206ENST00000497044 CECR2Q9BXF3 1484 aa6.87□□□□□ -1.31
SHTN1-206ENST00000497044 DNAJC5Q9H3Z4 198 aa6.85□□□□□ -1.31
SHTN1-206ENST00000497044 HMGXB3Q12766 1538 aa6.81□□□□□ -1.32
SHTN1-206ENST00000497044 SMARCA2P51531 1590 aa6.81□□□□□ -1.32
SHTN1-206ENST00000497044 PEG3Q9GZU2 1588 aa6.79□□□□□ -1.32
SHTN1-206ENST00000497044 NCAPD3P42695 1498 aa6.75□□□□□ -1.33
SHTN1-206ENST00000497044 U3KPZ7 1027 aaPredicted RBP6.75□□□□□ -1.33
SHTN1-206ENST00000497044 RTN4Q9NQC3 1192 aaKnown RBP6.71□□□□□ -1.33
SHTN1-206ENST00000497044 THOC2Q8NI27 1593 aaKnown RBP6.71□□□□□ -1.34
SHTN1-206ENST00000497044 LAMC3Q9Y6N6 1575 aa6.71□□□□□ -1.34
SHTN1-206ENST00000497044 AMER1Q5JTC6 1135 aaPredicted RBP6.67□□□□□ -1.34
SHTN1-206ENST00000497044 MKRN4PQ13434 485 aaPredicted RBP6.65□□□□□ -1.35
SHTN1-206ENST00000497044 SCRIBQ14160 1630 aa6.64□□□□□ -1.35
SHTN1-206ENST00000497044 PRDM2Q13029 1718 aa6.61□□□□□ -1.35
SHTN1-206ENST00000497044 WDR62O43379 1518 aa6.59□□□□□ -1.35
SHTN1-206ENST00000497044 WDR97A6NE52 1622 aa6.59□□□□□ -1.35
SHTN1-206ENST00000497044 SMARCA4P51532 1647 aa6.59□□□□□ -1.35
SHTN1-206ENST00000497044 PABPN1Q86U42 306 aaKnown RBP eCLIP6.57□□□□□ -1.36
SHTN1-206ENST00000497044 BAZ1AQ9NRL2 1556 aaPredicted RBP6.55□□□□□ -1.36
SHTN1-206ENST00000497044 ATAD2BQ9ULI0 1458 aa6.55□□□□□ -1.36
SHTN1-206ENST00000497044 SAMD1Q6SPF0 538 aaPredicted RBP6.52□□□□□ -1.36
SHTN1-206ENST00000497044 ZNF219Q9P2Y4 722 aaPredicted RBP6.52□□□□□ -1.36
SHTN1-206ENST00000497044 FKBP8Q14318 412 aa6.51□□□□□ -1.37
SHTN1-206ENST00000497044 KIF21AQ7Z4S6 1674 aa6.5□□□□□ -1.37
SHTN1-206ENST00000497044 PDS5BQ9NTI5 1447 aa6.48□□□□□ -1.37
SHTN1-206ENST00000497044 RNF39Q9H2S5 420 aa6.48□□□□□ -1.37
SHTN1-206ENST00000497044 MRC2Q9UBG0 1479 aa6.48□□□□□ -1.37
SHTN1-206ENST00000497044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.48□□□□□ -1.37
SHTN1-206ENST00000497044 SLC24A1O60721 1099 aa6.48□□□□□ -1.37
SHTN1-206ENST00000497044 HNRNPUL2Q1KMD3 747 aaKnown RBP6.48□□□□□ -1.37
SHTN1-206ENST00000497044 ERCC6Q03468 1493 aa6.47□□□□□ -1.37
SHTN1-206ENST00000497044 BAZ1BQ9UIG0 1483 aaKnown RBP6.46□□□□□ -1.38
SHTN1-206ENST00000497044 ABCC8Q09428 1581 aa6.4□□□□□ -1.39
SHTN1-206ENST00000497044 IFNLR1Q8IU57 520 aaPredicted RBP6.36□□□□□ -1.39
SHTN1-206ENST00000497044 RSF1Q96T23 1441 aaPredicted RBP6.36□□□□□ -1.39
SHTN1-206ENST00000497044 CADPSQ9ULU8 1353 aa6.36□□□□□ -1.39
SHTN1-206ENST00000497044 PKD2Q13563 968 aa6.36□□□□□ -1.39
SHTN1-206ENST00000497044 CFTRP13569 1480 aa6.35□□□□□ -1.39
SHTN1-206ENST00000497044 RIMBP3CA6NJZ7 1639 aa6.35□□□□□ -1.39
SHTN1-206ENST00000497044 RIMBP3BA6NNM3 1639 aa6.35□□□□□ -1.39
SHTN1-206ENST00000497044 RIMBP3Q9UFD9 1639 aa6.35□□□□□ -1.39
SHTN1-206ENST00000497044 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.33□□□□□ -1.49e-7■□□□□ 10.6
SHTN1-206ENST00000497044 IFT140Q96RY7 1462 aa6.33□□□□□ -1.4
SHTN1-206ENST00000497044 CEP164Q9UPV0 1460 aa6.32□□□□□ -1.4
SHTN1-206ENST00000497044 NESP48681 1621 aa6.32□□□□□ -1.4
SHTN1-206ENST00000497044 SSUH2Q9Y2M2 353 aa6.31□□□□□ -1.4
SHTN1-206ENST00000497044 TOP2AP11388 1531 aaKnown RBP6.3□□□□□ -1.4
SHTN1-206ENST00000497044 SPDYE4A6NLX3 237 aa6.3□□□□□ -1.4
SHTN1-206ENST00000497044 SPINK5Q9NQ38 1064 aaPredicted RBP6.3□□□□□ -1.4
SHTN1-206ENST00000497044 CLASP1Q7Z460 1538 aa6.28□□□□□ -1.4
SHTN1-206ENST00000497044 DNMBPQ6XZF7 1577 aa6.26□□□□□ -1.41
SHTN1-206ENST00000497044 C1QBPQ07021 282 aaKnown RBP6.26□□□□□ -1.41
SHTN1-206ENST00000497044 TARBP1Q13395 1621 aaKnown RBP6.26□□□□□ -1.41
SHTN1-206ENST00000497044 VASPP50552 380 aaPredicted RBP6.25□□□□□ -1.41
SHTN1-206ENST00000497044 FANCD2Q9BXW9 1451 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms