RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 NISCHQ9Y2I1 1504 aa52.04■■■■■ 5.92
PAXBP1-208ENST00000472588 CCDC180Q9P1Z9 1646 aa45.85■■■■■ 4.93
PAXBP1-208ENST00000472588 ABCC9O60706 1549 aa44.48■■■■■ 4.71
PAXBP1-208ENST00000472588 ZCCHC6Q5VYS8 1495 aaKnown RBP43.56■■■■■ 4.56
PAXBP1-208ENST00000472588 DCAF1Q9Y4B6 1507 aa43.15■■■■■ 4.5
PAXBP1-208ENST00000472588 DCAF8L2P0C7V8 631 aa43.09■■■■■ 4.49
PAXBP1-208ENST00000472588 MYO15BQ96JP2 1530 aa42.95■■■■■ 4.47
PAXBP1-208ENST00000472588 NACADO15069 1562 aa42.86■■■■■ 4.45
PAXBP1-208ENST00000472588 RB1CC1Q8TDY2 1594 aa42.85■■■■■ 4.45
PAXBP1-208ENST00000472588 UNC13AQ9UPW8 1703 aa41.97■■■■■ 4.31
PAXBP1-208ENST00000472588 SCRIBQ14160 1630 aa41.86■■■■■ 4.29
PAXBP1-208ENST00000472588 SHROOM4Q9ULL8 1493 aa41.71■■■■■ 4.27
PAXBP1-208ENST00000472588 BICRAQ9NZM4 1560 aa41.56■■■■■ 4.24
PAXBP1-208ENST00000472588 PABPN1Q86U42 306 aaKnown RBP eCLIP41.54■■■■■ 4.24
PAXBP1-208ENST00000472588 DNAJC5BQ9UF47 199 aa40.67■■■■■ 4.1
PAXBP1-208ENST00000472588 EIF4G1Q04637 1599 aaKnown RBP40.45■■■■■ 4.07
PAXBP1-208ENST00000472588 CECR2Q9BXF3 1484 aa40.36■■■■■ 4.05
PAXBP1-208ENST00000472588 BAZ1AQ9NRL2 1556 aaPredicted RBP40.31■■■■■ 4.04
PAXBP1-208ENST00000472588 CC2D2AQ9P2K1 1620 aa40.27■■■■■ 4.04
PAXBP1-208ENST00000472588 SMARCA4P51532 1647 aa40.16■■■■■ 4.02
PAXBP1-208ENST00000472588 MROH2BQ7Z745 1585 aa40.08■■■■■ 4.01
PAXBP1-208ENST00000472588 RSF1Q96T23 1441 aaPredicted RBP40.03■■■■■ 4
PAXBP1-208ENST00000472588 SUPT5HO00267 1087 aaKnown RBP39.83■■■■□ 3.97
PAXBP1-208ENST00000472588 PEG3Q9GZU2 1588 aa39.77■■■■□ 3.96
PAXBP1-208ENST00000472588 WIZO95785 1651 aa39.73■■■■□ 3.95
PAXBP1-208ENST00000472588 SMARCA2P51531 1590 aa39.73■■■■□ 3.95
PAXBP1-208ENST00000472588 ATAD2BQ9ULI0 1458 aa39.66■■■■□ 3.94
PAXBP1-208ENST00000472588 NCAPD3P42695 1498 aa39.51■■■■□ 3.91
PAXBP1-208ENST00000472588 BAZ1BQ9UIG0 1483 aaKnown RBP39.43■■■■□ 3.9
PAXBP1-208ENST00000472588 HMGXB3Q12766 1538 aa39.42■■■■□ 3.9
PAXBP1-208ENST00000472588 TOP2AP11388 1531 aaKnown RBP39.39■■■■□ 3.9
PAXBP1-208ENST00000472588 CCDC88BA6NC98 1476 aa38.91■■■■□ 3.82
PAXBP1-208ENST00000472588 NESP48681 1621 aa38.53■■■■□ 3.76
PAXBP1-208ENST00000472588 LAMC3Q9Y6N6 1575 aa38.46■■■■□ 3.75
PAXBP1-208ENST00000472588 CADPSQ9ULU8 1353 aa38.41■■■■□ 3.74
PAXBP1-208ENST00000472588 CFTRP13569 1480 aa38.4■■■■□ 3.74
PAXBP1-208ENST00000472588 ERCC6Q03468 1493 aa38.32■■■■□ 3.73
PAXBP1-208ENST00000472588 PRDM2Q13029 1718 aa38.26■■■■□ 3.71
PAXBP1-208ENST00000472588 PDS5BQ9NTI5 1447 aa38.15■■■■□ 3.7
PAXBP1-208ENST00000472588 KIF21AQ7Z4S6 1674 aa38.14■■■■□ 3.7
PAXBP1-208ENST00000472588 FANCD2Q9BXW9 1451 aa37.97■■■■□ 3.67
PAXBP1-208ENST00000472588 THOC2Q8NI27 1593 aaKnown RBP37.96■■■■□ 3.67
PAXBP1-208ENST00000472588 CUX2O14529 1486 aa37.87■■■■□ 3.65
PAXBP1-208ENST00000472588 CEP164Q9UPV0 1460 aa37.87■■■■□ 3.65
PAXBP1-208ENST00000472588 ABCC8Q09428 1581 aa37.79■■■■□ 3.64
PAXBP1-208ENST00000472588 CHIC1Q5VXU3 224 aa37.78■■■■□ 3.64
PAXBP1-208ENST00000472588 MRC2Q9UBG0 1479 aa37.78■■■■□ 3.64
PAXBP1-208ENST00000472588 WRNQ14191 1432 aaPredicted RBP eCLIP37.75■■■■□ 3.63
PAXBP1-208ENST00000472588 WDR62O43379 1518 aa37.67■■■■□ 3.62
PAXBP1-208ENST00000472588 TRIM41Q8WV44 630 aa37.63■■■■□ 3.61
PAXBP1-208ENST00000472588 TOP2BQ02880 1626 aa37.56■■■■□ 3.6
PAXBP1-208ENST00000472588 SYNJ1O43426 1573 aa37.56■■■■□ 3.6
PAXBP1-208ENST00000472588 CUX1P39880 1505 aa37.55■■■■□ 3.6
PAXBP1-208ENST00000472588 BIVM-ERCC5R4GMW8 1640 aa37.54■■■■□ 3.6
PAXBP1-208ENST00000472588 DNMBPQ6XZF7 1577 aa37.54■■■■□ 3.6
PAXBP1-208ENST00000472588 URB2Q14146 1524 aaKnown RBP37.54■■■■□ 3.6
PAXBP1-208ENST00000472588 TOPBP1Q92547 1522 aa37.46■■■■□ 3.59
PAXBP1-208ENST00000472588 FGD5Q6ZNL6 1462 aa37.28■■■■□ 3.56
PAXBP1-208ENST00000472588 POLA1P09884 1462 aaPredicted RBP37.22■■■■□ 3.55
PAXBP1-208ENST00000472588 SOGA1O94964 1423 aa37.11■■■■□ 3.53
PAXBP1-208ENST00000472588 IFT140Q96RY7 1462 aa37.05■■■■□ 3.52
PAXBP1-208ENST00000472588 RAD54L2Q9Y4B4 1467 aa37.01■■■■□ 3.51
PAXBP1-208ENST00000472588 ABCA10Q8WWZ4 1543 aa36.99■■■■□ 3.51
PAXBP1-208ENST00000472588 TARBP1Q13395 1621 aaKnown RBP36.98■■■■□ 3.51
PAXBP1-208ENST00000472588 EEA1Q15075 1411 aa36.95■■■■□ 3.5
PAXBP1-208ENST00000472588 WDR97A6NE52 1622 aa36.93■■■■□ 3.5
PAXBP1-208ENST00000472588 KIF27Q86VH2 1401 aa36.91■■■■□ 3.5
PAXBP1-208ENST00000472588 ZNF608Q9ULD9 1512 aaPredicted RBP36.89■■■■□ 3.5
PAXBP1-208ENST00000472588 EIF4G3O43432 1585 aaKnown RBP36.8■■■■□ 3.48
PAXBP1-208ENST00000472588 RUSC2Q8N2Y8 1516 aa36.79■■■■□ 3.48
PAXBP1-208ENST00000472588 FAM9AQ8IZU1 332 aaPredicted RBP36.76■■■■□ 3.47
PAXBP1-208ENST00000472588 TDRD9Q8NDG6 1382 aaKnown RBP36.74■■■■□ 3.47
PAXBP1-208ENST00000472588 ABCA5Q8WWZ7 1642 aa36.74■■■■□ 3.47
PAXBP1-208ENST00000472588 GAPVD1Q14C86 1478 aa36.7■■■■□ 3.47
PAXBP1-208ENST00000472588 CSRNP3Q8WYN3 585 aa36.69■■■■□ 3.46
PAXBP1-208ENST00000472588 AQRO60306 1485 aaKnown RBP eCLIP36.68■■■■□ 3.465e-12■■■■■ 58.3
PAXBP1-208ENST00000472588 ERICH3Q5RHP9 1530 aa36.6■■■■□ 3.45
PAXBP1-208ENST00000472588 IGF1RP08069 1367 aa36.57■■■■□ 3.45
PAXBP1-208ENST00000472588 PBRM1Q86U86 1689 aa36.57■■■■□ 3.44
PAXBP1-208ENST00000472588 GRIN2BQ13224 1484 aa36.56■■■■□ 3.44
PAXBP1-208ENST00000472588 DNAJC5Q9H3Z4 198 aa36.52■■■■□ 3.44
PAXBP1-208ENST00000472588 CUL7Q14999 1698 aa36.49■■■■□ 3.43
PAXBP1-208ENST00000472588 KIF21BO75037 1637 aa36.43■■■■□ 3.42
PAXBP1-208ENST00000472588 PRXQ9BXM0 1461 aa36.42■■■■□ 3.42
PAXBP1-208ENST00000472588 CARMIL1Q5VZK9 1371 aa36.41■■■■□ 3.42
PAXBP1-208ENST00000472588 SNAPC4Q5SXM2 1469 aa36.37■■■■□ 3.41
PAXBP1-208ENST00000472588 MAGI1Q96QZ7 1491 aaPredicted RBP36.36■■■■□ 3.41
PAXBP1-208ENST00000472588 CHD1O14646 1710 aa36.34■■■■□ 3.41
PAXBP1-208ENST00000472588 FHAD1B1AJZ9 1412 aa36.32■■■■□ 3.4
PAXBP1-208ENST00000472588 RAPGEF2Q9Y4G8 1499 aa36.32■■■■□ 3.4
PAXBP1-208ENST00000472588 GOLGA3Q08378 1498 aa36.3■■■■□ 3.4
PAXBP1-208ENST00000472588 ADAMTS12P58397 1594 aa36.3■■■■□ 3.4
PAXBP1-208ENST00000472588 OSCARQ8IYS5 282 aa36.28■■■■□ 3.4
PAXBP1-208ENST00000472588 LOC105371045A0A1W2PR82 267 aa36.21■■■■□ 3.39
PAXBP1-208ENST00000472588 FBLN2P98095 1184 aa36.2■■■■□ 3.39
PAXBP1-208ENST00000472588 SYNJ2O15056 1496 aa36.2■■■■□ 3.38
PAXBP1-208ENST00000472588 EHMT2Q96KQ7 1210 aa36.17■■■■□ 3.38
PAXBP1-208ENST00000472588 UBTFP17480 764 aaKnown RBP36.14■■■■□ 3.38
PAXBP1-208ENST00000472588 CHMP7Q8WUX9 453 aaPredicted RBP36.12■■■■□ 3.37
PAXBP1-208ENST00000472588 GRIN2AQ12879 1464 aa36.07■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms