RNA–Protein interactions for RNA: ENST00000498778.5

MKLN1-212, Transcript of muskelin 1, humanhuman

TSL 1 (best)

Gene MKLN1, Length 3,380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKLN1-212ENST00000498778 CHIC1Q5VXU3 224 aa9.9□□□□□ -0.82
MKLN1-212ENST00000498778 AEBP2Q6ZN18 517 aaPredicted RBP9.86□□□□□ -0.83
MKLN1-212ENST00000498778 PHF23Q9BUL5 403 aaPredicted RBP8.63□□□□□ -1.03
MKLN1-212ENST00000498778 SENP3Q9H4L4 574 aaPredicted RBP8.47□□□□□ -1.05
MKLN1-212ENST00000498778 PLPPR3Q6T4P5 718 aa8.1□□□□□ -1.11
MKLN1-212ENST00000498778 FOXD1Q16676 465 aa7.74□□□□□ -1.17
MKLN1-212ENST00000498778 NISCHQ9Y2I1 1504 aa7.6□□□□□ -1.19
MKLN1-212ENST00000498778 PPP6R1Q9UPN7 881 aa7.49□□□□□ -1.21
MKLN1-212ENST00000498778 ADRA2BP18089 450 aa7.48□□□□□ -1.21
MKLN1-212ENST00000498778 PIAS4Q8N2W9 510 aaPredicted RBP7.3□□□□□ -1.24
MKLN1-212ENST00000498778 MSH5O43196 834 aa7.21□□□□□ -1.25
MKLN1-212ENST00000498778 PPP4R3CPQ6ZMV5 832 aa7.1□□□□□ -1.27
MKLN1-212ENST00000498778 NCBP3Q53F19 620 aaKnown RBP7.05□□□□□ -1.28
MKLN1-212ENST00000498778 SCAF1Q9H7N4 1312 aaKnown RBP7.03□□□□□ -1.28
MKLN1-212ENST00000498778 KCNA4P22459 653 aa7.02□□□□□ -1.29
MKLN1-212ENST00000498778 DNAJC5BQ9UF47 199 aa6.95□□□□□ -1.3
MKLN1-212ENST00000498778 CNKSR2Q8WXI2 1034 aa6.95□□□□□ -1.3
MKLN1-212ENST00000498778 NPM3O75607 178 aaKnown RBP6.84□□□□□ -1.31
MKLN1-212ENST00000498778 RNF216Q9NWF9 866 aaPredicted RBP6.8□□□□□ -1.32
MKLN1-212ENST00000498778 CCDC180Q9P1Z9 1646 aa6.8□□□□□ -1.32
MKLN1-212ENST00000498778 DMRT2Q9Y5R5 561 aa6.8□□□□□ -1.32
MKLN1-212ENST00000498778 POTEDQ86YR6 584 aa6.77□□□□□ -1.33
MKLN1-212ENST00000498778 SLC4A1APQ9BWU0 796 aaKnown RBP6.77□□□□□ -1.33
MKLN1-212ENST00000498778 ABCC9O60706 1549 aa6.75□□□□□ -1.33
MKLN1-212ENST00000498778 HOXD11P31277 338 aaPredicted RBP6.74□□□□□ -1.33
MKLN1-212ENST00000498778 MAPK8IP2Q13387 824 aaPredicted RBP6.71□□□□□ -1.34
MKLN1-212ENST00000498778 CSRNP3Q8WYN3 585 aa6.57□□□□□ -1.36
MKLN1-212ENST00000498778 EHMT2Q96KQ7 1210 aa6.55□□□□□ -1.36
MKLN1-212ENST00000498778 FOXD4L1Q9NU39 408 aa6.53□□□□□ -1.36
MKLN1-212ENST00000498778 ZBTB22O15209 634 aa6.47□□□□□ -1.37
MKLN1-212ENST00000498778 RB1CC1Q8TDY2 1594 aa6.45□□□□□ -1.38
MKLN1-212ENST00000498778 ATXN8OSP0DMR3 200 aa6.44□□□□□ -1.38
MKLN1-212ENST00000498778 DCAF8L2P0C7V8 631 aa6.43□□□□□ -1.38
MKLN1-212ENST00000498778 SLC4A2P04920 1241 aa6.42□□□□□ -1.38
MKLN1-212ENST00000498778 NACADO15069 1562 aa6.42□□□□□ -1.38
MKLN1-212ENST00000498778 MYCNP04198 464 aaPredicted RBP6.4□□□□□ -1.38
MKLN1-212ENST00000498778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.33□□□□□ -1.4
MKLN1-212ENST00000498778 HNRNPUL2Q1KMD3 747 aaKnown RBP6.33□□□□□ -1.4
MKLN1-212ENST00000498778 MYO15BQ96JP2 1530 aa6.33□□□□□ -1.4
MKLN1-212ENST00000498778 ZCCHC6Q5VYS8 1495 aaKnown RBP6.3□□□□□ -1.4
MKLN1-212ENST00000498778 UNC13AQ9UPW8 1703 aa6.3□□□□□ -1.4
MKLN1-212ENST00000498778 PABPN1Q86U42 306 aaKnown RBP eCLIP6.29□□□□□ -1.4
MKLN1-212ENST00000498778 APLP2Q06481 763 aa6.28□□□□□ -1.4
MKLN1-212ENST00000498778 SAMD1Q6SPF0 538 aaPredicted RBP6.28□□□□□ -1.4
MKLN1-212ENST00000498778 DCAF1Q9Y4B6 1507 aa6.27□□□□□ -1.41
MKLN1-212ENST00000498778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.27□□□□□ -1.413e-8■□□□□ 10.1
MKLN1-212ENST00000498778 BICRAQ9NZM4 1560 aa6.23□□□□□ -1.41
MKLN1-212ENST00000498778 DCAF8L1A6NGE4 600 aa6.23□□□□□ -1.41
MKLN1-212ENST00000498778 U3KPZ7 1027 aaPredicted RBP6.23□□□□□ -1.41
MKLN1-212ENST00000498778 SCRIBQ14160 1630 aa6.2□□□□□ -1.42
MKLN1-212ENST00000498778 SHROOM4Q9ULL8 1493 aa6.17□□□□□ -1.42
MKLN1-212ENST00000498778 RNF39Q9H2S5 420 aa6.15□□□□□ -1.43
MKLN1-212ENST00000498778 C1QBPQ07021 282 aaKnown RBP6.13□□□□□ -1.43
MKLN1-212ENST00000498778 EIF4G1Q04637 1599 aaKnown RBP6.09□□□□□ -1.43
MKLN1-212ENST00000498778 CC2D2AQ9P2K1 1620 aa6.09□□□□□ -1.43
MKLN1-212ENST00000498778 CECR2Q9BXF3 1484 aa6.07□□□□□ -1.44
MKLN1-212ENST00000498778 ATF5Q9Y2D1 282 aaPredicted RBP6.07□□□□□ -1.44
MKLN1-212ENST00000498778 ZNF219Q9P2Y4 722 aaPredicted RBP6.06□□□□□ -1.44
MKLN1-212ENST00000498778 ZBTB12Q9Y330 459 aaPredicted RBP5.98□□□□□ -1.45
MKLN1-212ENST00000498778 FBLN2P98095 1184 aa5.93□□□□□ -1.46
MKLN1-212ENST00000498778 SMARCA4P51532 1647 aa5.92□□□□□ -1.46
MKLN1-212ENST00000498778 NCAPD3P42695 1498 aa5.91□□□□□ -1.46
MKLN1-212ENST00000498778 SPINK5Q9NQ38 1064 aaPredicted RBP5.91□□□□□ -1.46
MKLN1-212ENST00000498778 SMARCA2P51531 1590 aa5.91□□□□□ -1.46
MKLN1-212ENST00000498778 PROM2Q8N271 834 aa5.9□□□□□ -1.46
MKLN1-212ENST00000498778 ATAD2BQ9ULI0 1458 aa5.9□□□□□ -1.46
MKLN1-212ENST00000498778 BAZ1AQ9NRL2 1556 aaPredicted RBP5.9□□□□□ -1.46
MKLN1-212ENST00000498778 CAPN15O75808 1086 aa5.9□□□□□ -1.47
MKLN1-212ENST00000498778 FKBP8Q14318 412 aa5.88□□□□□ -1.47
MKLN1-212ENST00000498778 HMGXB3Q12766 1538 aa5.88□□□□□ -1.47
MKLN1-212ENST00000498778 BAZ1BQ9UIG0 1483 aaKnown RBP5.87□□□□□ -1.47
MKLN1-212ENST00000498778 MKRN4PQ13434 485 aaPredicted RBP5.87□□□□□ -1.47
MKLN1-212ENST00000498778 TRHP20396 242 aaPredicted RBP5.86□□□□□ -1.47
MKLN1-212ENST00000498778 DSG3P32926 999 aa5.86□□□□□ -1.47
MKLN1-212ENST00000498778 POLA2Q14181 598 aa5.86□□□□□ -1.47
MKLN1-212ENST00000498778 MROH2BQ7Z745 1585 aa5.85□□□□□ -1.47
MKLN1-212ENST00000498778 PEG3Q9GZU2 1588 aa5.85□□□□□ -1.47
MKLN1-212ENST00000498778 ERCC6Q03468 1493 aa5.84□□□□□ -1.47
MKLN1-212ENST00000498778 SPDYE4A6NLX3 237 aa5.81□□□□□ -1.48
MKLN1-212ENST00000498778 FBXO3Q9UK99 471 aa5.8□□□□□ -1.48
MKLN1-212ENST00000498778 NESP48681 1621 aa5.8□□□□□ -1.48
MKLN1-212ENST00000498778 CUX2O14529 1486 aa5.79□□□□□ -1.48
MKLN1-212ENST00000498778 WIZO95785 1651 aa5.79□□□□□ -1.48
MKLN1-212ENST00000498778 LAMC3Q9Y6N6 1575 aa5.78□□□□□ -1.48
MKLN1-212ENST00000498778 SPDYE2BA6NHP3 402 aa5.77□□□□□ -1.49
MKLN1-212ENST00000498778 SPDYE6P0CI01 402 aa5.77□□□□□ -1.49
MKLN1-212ENST00000498778 CACNB1Q02641 598 aaPredicted RBP5.77□□□□□ -1.49
MKLN1-212ENST00000498778 SPDYE2Q495Y8 402 aa5.77□□□□□ -1.49
MKLN1-212ENST00000498778 AMER1Q5JTC6 1135 aaPredicted RBP5.77□□□□□ -1.49
MKLN1-212ENST00000498778 PDS5BQ9NTI5 1447 aa5.76□□□□□ -1.49
MKLN1-212ENST00000498778 SSUH2Q9Y2M2 353 aa5.75□□□□□ -1.49
MKLN1-212ENST00000498778 RSF1Q96T23 1441 aaPredicted RBP5.75□□□□□ -1.49
MKLN1-212ENST00000498778 CADPSQ9ULU8 1353 aa5.74□□□□□ -1.49
MKLN1-212ENST00000498778 KIF21AQ7Z4S6 1674 aa5.74□□□□□ -1.49
MKLN1-212ENST00000498778 ABCB7O75027 752 aa5.73□□□□□ -1.49
MKLN1-212ENST00000498778 THOC2Q8NI27 1593 aaKnown RBP5.72□□□□□ -1.49
MKLN1-212ENST00000498778 TOP2AP11388 1531 aaKnown RBP5.72□□□□□ -1.49
MKLN1-212ENST00000498778 DNAJC5Q9H3Z4 198 aa5.72□□□□□ -1.49
MKLN1-212ENST00000498778 STAG3Q9UJ98 1225 aa5.7□□□□□ -1.5
MKLN1-212ENST00000498778 MRC2Q9UBG0 1479 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms