RNA–Protein interactions for RNA: ENST00000402038.7

PARG-201, Transcript of poly(ADP-ribose) glycohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARG, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARG-201ENST00000402038 NISCHQ9Y2I1 1504 aa21.88■■□□□ 1.09
PARG-201ENST00000402038 DCAF8L2P0C7V8 631 aa21.06■□□□□ 0.96
PARG-201ENST00000402038 SHROOM4Q9ULL8 1493 aa20.05■□□□□ 0.8
PARG-201ENST00000402038 SUPT5HO00267 1087 aaKnown RBP19.87■□□□□ 0.77
PARG-201ENST00000402038 EHMT2Q96KQ7 1210 aa18.96■□□□□ 0.63
PARG-201ENST00000402038 ABCC9O60706 1549 aa18.82■□□□□ 0.6
PARG-201ENST00000402038 FAM9AQ8IZU1 332 aaPredicted RBP18.65■□□□□ 0.58
PARG-201ENST00000402038 PABPN1Q86U42 306 aaKnown RBP eCLIP18.45■□□□□ 0.54
PARG-201ENST00000402038 TRIM41Q8WV44 630 aa18.34■□□□□ 0.53
PARG-201ENST00000402038 RANGAP1P46060 587 aaPredicted RBP18.19■□□□□ 0.5
PARG-201ENST00000402038 ZCCHC6Q5VYS8 1495 aaKnown RBP18.16■□□□□ 0.5
PARG-201ENST00000402038 TTBK1Q5TCY1 1321 aaPredicted RBP18.16■□□□□ 0.5
PARG-201ENST00000402038 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
PARG-201ENST00000402038 CHIC1Q5VXU3 224 aa18.07■□□□□ 0.48
PARG-201ENST00000402038 LOC105371045A0A1W2PR82 267 aa17.96■□□□□ 0.46
PARG-201ENST00000402038 SCRIBQ14160 1630 aa17.95■□□□□ 0.46
PARG-201ENST00000402038 UBTFP17480 764 aaKnown RBP17.94■□□□□ 0.46
PARG-201ENST00000402038 PCGF6Q9BYE7 350 aa17.93■□□□□ 0.46
PARG-201ENST00000402038 APLP2Q06481 763 aa17.89■□□□□ 0.45
PARG-201ENST00000402038 PPARGC1BQ86YN6 1023 aaKnown RBP17.84■□□□□ 0.45
PARG-201ENST00000402038 ATP1B4Q9UN42 357 aaPredicted RBP17.76■□□□□ 0.43
PARG-201ENST00000402038 RB1CC1Q8TDY2 1594 aa17.54■□□□□ 0.4
PARG-201ENST00000402038 NACADO15069 1562 aa17.47■□□□□ 0.39
PARG-201ENST00000402038 RSF1Q96T23 1441 aaPredicted RBP17.4■□□□□ 0.38
PARG-201ENST00000402038 CECR2Q9BXF3 1484 aa17.36■□□□□ 0.37
PARG-201ENST00000402038 DCAF1Q9Y4B6 1507 aa17.35■□□□□ 0.37
PARG-201ENST00000402038 CCER1Q8TC90 406 aaPredicted RBP17.34■□□□□ 0.37
PARG-201ENST00000402038 ITGAEP38570 1179 aa17.28■□□□□ 0.36
PARG-201ENST00000402038 TRIM26Q12899 539 aaPredicted RBP17.26■□□□□ 0.35
PARG-201ENST00000402038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.24■□□□□ 0.35
PARG-201ENST00000402038 HNRNPUL2Q1KMD3 747 aaKnown RBP17.24■□□□□ 0.35
PARG-201ENST00000402038 CSRNP3Q8WYN3 585 aa17.19■□□□□ 0.34
PARG-201ENST00000402038 FBLN2P98095 1184 aa17.16■□□□□ 0.34
PARG-201ENST00000402038 P3H3Q8IVL6 736 aa17.1■□□□□ 0.33
PARG-201ENST00000402038 MROH2BQ7Z745 1585 aa17.07■□□□□ 0.32
PARG-201ENST00000402038 BAZ1BQ9UIG0 1483 aaKnown RBP17.01■□□□□ 0.31
PARG-201ENST00000402038 BAZ1AQ9NRL2 1556 aaPredicted RBP17.01■□□□□ 0.31
PARG-201ENST00000402038 MYO15BQ96JP2 1530 aa17■□□□□ 0.31
PARG-201ENST00000402038 ARID3CA6NKF2 412 aa16.99■□□□□ 0.31
PARG-201ENST00000402038 ZEB1P37275 1124 aaPredicted RBP16.97■□□□□ 0.31
PARG-201ENST00000402038 HRCP23327 699 aa16.91■□□□□ 0.3
PARG-201ENST00000402038 FAM50AQ14320 339 aaKnown RBP16.89■□□□□ 0.29
PARG-201ENST00000402038 MYT1LQ9UL68 1186 aa16.86■□□□□ 0.29
PARG-201ENST00000402038 WRNQ14191 1432 aaPredicted RBP eCLIP16.82■□□□□ 0.28
PARG-201ENST00000402038 WIZO95785 1651 aa16.82■□□□□ 0.28
PARG-201ENST00000402038 CCDC88BA6NC98 1476 aa16.8■□□□□ 0.28
PARG-201ENST00000402038 ABCC8Q09428 1581 aa16.67■□□□□ 0.26
PARG-201ENST00000402038 SOGA1O94964 1423 aa16.67■□□□□ 0.26
PARG-201ENST00000402038 ATAD2BQ9ULI0 1458 aa16.64■□□□□ 0.25
PARG-201ENST00000402038 YTHDC1Q96MU7 727 aaKnown RBP16.63■□□□□ 0.25
PARG-201ENST00000402038 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
PARG-201ENST00000402038 TRIM52Q96A61 297 aa16.61■□□□□ 0.25
PARG-201ENST00000402038 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
PARG-201ENST00000402038 SMARCA4P51532 1647 aa16.6■□□□□ 0.25
PARG-201ENST00000402038 NEUROD1Q13562 356 aa16.59■□□□□ 0.25
PARG-201ENST00000402038 ZNF777Q9ULD5 760 aaPredicted RBP16.57■□□□□ 0.24
PARG-201ENST00000402038 CLIP1P30622 1438 aa16.57■□□□□ 0.24
PARG-201ENST00000402038 TOP2AP11388 1531 aaKnown RBP16.56■□□□□ 0.24
PARG-201ENST00000402038 POLR3GLQ9BT43 218 aa16.55■□□□□ 0.24
PARG-201ENST00000402038 CNGB1Q14028 1251 aaPredicted RBP16.55■□□□□ 0.24
PARG-201ENST00000402038 CEP162Q5TB80 1403 aa16.53■□□□□ 0.24
PARG-201ENST00000402038 KIF27Q86VH2 1401 aa16.53■□□□□ 0.24
PARG-201ENST00000402038 ERCC6Q03468 1493 aa16.5■□□□□ 0.23
PARG-201ENST00000402038 EEA1Q15075 1411 aa16.49■□□□□ 0.23
PARG-201ENST00000402038 GOLGA3Q08378 1498 aa16.49■□□□□ 0.23
PARG-201ENST00000402038 CUX2O14529 1486 aa16.47■□□□□ 0.23
PARG-201ENST00000402038 CADPSQ9ULU8 1353 aa16.45■□□□□ 0.22
PARG-201ENST00000402038 TDRD9Q8NDG6 1382 aaKnown RBP16.44■□□□□ 0.22
PARG-201ENST00000402038 CHIC2Q9UKJ5 165 aa16.42■□□□□ 0.22
PARG-201ENST00000402038 TNIKQ9UKE5 1360 aa16.42■□□□□ 0.22
PARG-201ENST00000402038 CDK11AQ9UQ88 783 aaPredicted RBP16.42■□□□□ 0.22
PARG-201ENST00000402038 CEP164Q9UPV0 1460 aa16.39■□□□□ 0.21
PARG-201ENST00000402038 CENPBP07199 599 aaPredicted RBP16.39■□□□□ 0.21
PARG-201ENST00000402038 CARMIL1Q5VZK9 1371 aa16.38■□□□□ 0.21
PARG-201ENST00000402038 ZNF326Q5BKZ1 582 aaKnown RBP16.38■□□□□ 0.21
PARG-201ENST00000402038 RUSC2Q8N2Y8 1516 aa16.37■□□□□ 0.21
PARG-201ENST00000402038 EIF4G1Q04637 1599 aaKnown RBP16.35■□□□□ 0.21
PARG-201ENST00000402038 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
PARG-201ENST00000402038 MTUS2Q5JR59 1369 aa16.34■□□□□ 0.21
PARG-201ENST00000402038 PDS5BQ9NTI5 1447 aa16.34■□□□□ 0.21
PARG-201ENST00000402038 DIEXFQ68CQ4 756 aaKnown RBP16.32■□□□□ 0.2
PARG-201ENST00000402038 KCNH8Q96L42 1107 aa16.29■□□□□ 0.2
PARG-201ENST00000402038 BICRAQ9NZM4 1560 aa16.28■□□□□ 0.2
PARG-201ENST00000402038 NCAPD3P42695 1498 aa16.27■□□□□ 0.2
PARG-201ENST00000402038 NPM1P06748 294 aaKnown RBP eCLIP16.24■□□□□ 0.19
PARG-201ENST00000402038 FANCD2Q9BXW9 1451 aa16.23■□□□□ 0.19
PARG-201ENST00000402038 RRP7BPQ9NSQ0 103 aa16.21■□□□□ 0.19
PARG-201ENST00000402038 KANK4Q5T7N3 995 aaPredicted RBP16.19■□□□□ 0.18
PARG-201ENST00000402038 RAPGEF2Q9Y4G8 1499 aa16.18■□□□□ 0.18
PARG-201ENST00000402038 PLEKHD1A6NEE1 506 aa16.17■□□□□ 0.18
PARG-201ENST00000402038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.17■□□□□ 0.18
PARG-201ENST00000402038 NESP48681 1621 aa16.16■□□□□ 0.18
PARG-201ENST00000402038 SLC4A1APQ9BWU0 796 aaKnown RBP16.15■□□□□ 0.18
PARG-201ENST00000402038 ZNF316A6NFI3 1004 aaPredicted RBP16.13■□□□□ 0.17
PARG-201ENST00000402038 TSPY4P0CV99 314 aa16.12■□□□□ 0.17
PARG-201ENST00000402038 TSPY10P0CW01 314 aa16.12■□□□□ 0.17
PARG-201ENST00000402038 RAD54L2Q9Y4B4 1467 aa16.11■□□□□ 0.17
PARG-201ENST00000402038 CC2D2AQ9P2K1 1620 aa16.11■□□□□ 0.17
PARG-201ENST00000402038 PELP1Q8IZL8 1130 aaKnown RBP16.09■□□□□ 0.17
PARG-201ENST00000402038 CFDP1Q9UEE9 299 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms