RNA–Protein interactions for RNA: ENST00000487286.1

PPM1B-210, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 4

Gene PPM1B, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-210ENST00000487286 NISCHQ9Y2I1 1504 aa18.88■□□□□ 0.61
PPM1B-210ENST00000487286 CHIC1Q5VXU3 224 aa17.7■□□□□ 0.42
PPM1B-210ENST00000487286 AEBP2Q6ZN18 517 aaPredicted RBP17.57■□□□□ 0.4
PPM1B-210ENST00000487286 CCDC180Q9P1Z9 1646 aa16.85■□□□□ 0.29
PPM1B-210ENST00000487286 ABCC9O60706 1549 aa16.75■□□□□ 0.27
PPM1B-210ENST00000487286 RB1CC1Q8TDY2 1594 aa15.94■□□□□ 0.14
PPM1B-210ENST00000487286 DCAF8L2P0C7V8 631 aa15.86■□□□□ 0.13
PPM1B-210ENST00000487286 NACADO15069 1562 aa15.86■□□□□ 0.13
PPM1B-210ENST00000487286 UNC13AQ9UPW8 1703 aa15.73■□□□□ 0.11
PPM1B-210ENST00000487286 ZCCHC6Q5VYS8 1495 aaKnown RBP15.7■□□□□ 0.1
PPM1B-210ENST00000487286 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
PPM1B-210ENST00000487286 PABPN1Q86U42 306 aaKnown RBP eCLIP15.62■□□□□ 0.09
PPM1B-210ENST00000487286 PHF23Q9BUL5 403 aaPredicted RBP15.6■□□□□ 0.09
PPM1B-210ENST00000487286 DNAJC5BQ9UF47 199 aa15.58■□□□□ 0.08
PPM1B-210ENST00000487286 BICRAQ9NZM4 1560 aa15.56■□□□□ 0.08
PPM1B-210ENST00000487286 DCAF1Q9Y4B6 1507 aa15.53■□□□□ 0.08
PPM1B-210ENST00000487286 SCRIBQ14160 1630 aa15.46■□□□□ 0.07
PPM1B-210ENST00000487286 SHROOM4Q9ULL8 1493 aa15.2■□□□□ 0.02
PPM1B-210ENST00000487286 CC2D2AQ9P2K1 1620 aa15.14■□□□□ 0.01
PPM1B-210ENST00000487286 EIF4G1Q04637 1599 aaKnown RBP15.13■□□□□ 0.01
PPM1B-210ENST00000487286 CECR2Q9BXF3 1484 aa15.03■□□□□ -0
PPM1B-210ENST00000487286 SENP3Q9H4L4 574 aaPredicted RBP14.85□□□□□ -0.03
PPM1B-210ENST00000487286 SMARCA4P51532 1647 aa14.72□□□□□ -0.05
PPM1B-210ENST00000487286 ATAD2BQ9ULI0 1458 aa14.66□□□□□ -0.06
PPM1B-210ENST00000487286 NCAPD3P42695 1498 aa14.63□□□□□ -0.07
PPM1B-210ENST00000487286 BAZ1AQ9NRL2 1556 aaPredicted RBP14.61□□□□□ -0.07
PPM1B-210ENST00000487286 PLPPR3Q6T4P5 718 aa14.61□□□□□ -0.07
PPM1B-210ENST00000487286 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
PPM1B-210ENST00000487286 SMARCA2P51531 1590 aa14.59□□□□□ -0.07
PPM1B-210ENST00000487286 HMGXB3Q12766 1538 aa14.56□□□□□ -0.08
PPM1B-210ENST00000487286 PEG3Q9GZU2 1588 aa14.52□□□□□ -0.08
PPM1B-210ENST00000487286 BAZ1BQ9UIG0 1483 aaKnown RBP14.52□□□□□ -0.08
PPM1B-210ENST00000487286 NESP48681 1621 aa14.48□□□□□ -0.09
PPM1B-210ENST00000487286 WIZO95785 1651 aa14.46□□□□□ -0.09
PPM1B-210ENST00000487286 ERCC6Q03468 1493 aa14.39□□□□□ -0.11
PPM1B-210ENST00000487286 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
PPM1B-210ENST00000487286 KIF21AQ7Z4S6 1674 aa14.3□□□□□ -0.12
PPM1B-210ENST00000487286 LAMC3Q9Y6N6 1575 aa14.3□□□□□ -0.12
PPM1B-210ENST00000487286 THOC2Q8NI27 1593 aaKnown RBP14.28□□□□□ -0.12
PPM1B-210ENST00000487286 CUX2O14529 1486 aa14.27□□□□□ -0.12
PPM1B-210ENST00000487286 TOP2AP11388 1531 aaKnown RBP14.22□□□□□ -0.13
PPM1B-210ENST00000487286 CADPSQ9ULU8 1353 aa14.21□□□□□ -0.14
PPM1B-210ENST00000487286 PDS5BQ9NTI5 1447 aa14.17□□□□□ -0.14
PPM1B-210ENST00000487286 CFTRP13569 1480 aa14.1□□□□□ -0.15
PPM1B-210ENST00000487286 MRC2Q9UBG0 1479 aa14.09□□□□□ -0.15
PPM1B-210ENST00000487286 FANCD2Q9BXW9 1451 aa14.08□□□□□ -0.16
PPM1B-210ENST00000487286 DNAJC5Q9H3Z4 198 aa14.07□□□□□ -0.16
PPM1B-210ENST00000487286 CCDC88BA6NC98 1476 aa14.06□□□□□ -0.16
PPM1B-210ENST00000487286 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
PPM1B-210ENST00000487286 WDR62O43379 1518 aa14.06□□□□□ -0.16
PPM1B-210ENST00000487286 PRDM2Q13029 1718 aa14.03□□□□□ -0.16
PPM1B-210ENST00000487286 URB2Q14146 1524 aaKnown RBP14□□□□□ -0.17
PPM1B-210ENST00000487286 TOPBP1Q92547 1522 aa13.85□□□□□ -0.19
PPM1B-210ENST00000487286 SUPT5HO00267 1087 aaKnown RBP13.82□□□□□ -0.2
PPM1B-210ENST00000487286 ZNF608Q9ULD9 1512 aaPredicted RBP13.81□□□□□ -0.2
PPM1B-210ENST00000487286 DNMBPQ6XZF7 1577 aa13.8□□□□□ -0.2
PPM1B-210ENST00000487286 IFT140Q96RY7 1462 aa13.75□□□□□ -0.21
PPM1B-210ENST00000487286 EIF4G3O43432 1585 aaKnown RBP13.74□□□□□ -0.21
PPM1B-210ENST00000487286 TARBP1Q13395 1621 aaKnown RBP13.73□□□□□ -0.21
PPM1B-210ENST00000487286 POLA1P09884 1462 aaPredicted RBP13.72□□□□□ -0.21
PPM1B-210ENST00000487286 ABCC8Q09428 1581 aa13.71□□□□□ -0.21
PPM1B-210ENST00000487286 CUX1P39880 1505 aa13.71□□□□□ -0.21
PPM1B-210ENST00000487286 RAD54L2Q9Y4B4 1467 aa13.7□□□□□ -0.22
PPM1B-210ENST00000487286 FOXD1Q16676 465 aa13.69□□□□□ -0.22
PPM1B-210ENST00000487286 AQRO60306 1485 aaKnown RBP eCLIP13.67□□□□□ -0.22
PPM1B-210ENST00000487286 FGD5Q6ZNL6 1462 aa13.67□□□□□ -0.22
PPM1B-210ENST00000487286 ADRA2BP18089 450 aa13.65□□□□□ -0.22
PPM1B-210ENST00000487286 CHD1O14646 1710 aa13.64□□□□□ -0.23
PPM1B-210ENST00000487286 OSCARQ8IYS5 282 aa13.62□□□□□ -0.23
PPM1B-210ENST00000487286 SOGA1O94964 1423 aa13.62□□□□□ -0.23
PPM1B-210ENST00000487286 TDRD9Q8NDG6 1382 aaKnown RBP13.61□□□□□ -0.23
PPM1B-210ENST00000487286 WDR97A6NE52 1622 aa13.61□□□□□ -0.23
PPM1B-210ENST00000487286 TRIM41Q8WV44 630 aa13.6□□□□□ -0.23
PPM1B-210ENST00000487286 PPP6R1Q9UPN7 881 aa13.58□□□□□ -0.24
PPM1B-210ENST00000487286 RIMBP3CA6NJZ7 1639 aa13.56□□□□□ -0.24
PPM1B-210ENST00000487286 RIMBP3BA6NNM3 1639 aa13.56□□□□□ -0.24
PPM1B-210ENST00000487286 RIMBP3Q9UFD9 1639 aa13.56□□□□□ -0.24
PPM1B-210ENST00000487286 SNAPC4Q5SXM2 1469 aa13.55□□□□□ -0.24
PPM1B-210ENST00000487286 SYNJ1O43426 1573 aa13.54□□□□□ -0.24
PPM1B-210ENST00000487286 PBRM1Q86U86 1689 aa13.53□□□□□ -0.24
PPM1B-210ENST00000487286 FBLN2P98095 1184 aa13.52□□□□□ -0.25
PPM1B-210ENST00000487286 BIVM-ERCC5R4GMW8 1640 aa13.51□□□□□ -0.25
PPM1B-210ENST00000487286 ARHGEF11O15085 1522 aa13.5□□□□□ -0.25
PPM1B-210ENST00000487286 TOP2BQ02880 1626 aa13.5□□□□□ -0.25
PPM1B-210ENST00000487286 ABCA5Q8WWZ7 1642 aa13.5□□□□□ -0.25
PPM1B-210ENST00000487286 ABCA10Q8WWZ4 1543 aa13.48□□□□□ -0.25
PPM1B-210ENST00000487286 GRIN2BQ13224 1484 aa13.48□□□□□ -0.25
PPM1B-210ENST00000487286 GAPVD1Q14C86 1478 aa13.48□□□□□ -0.25
PPM1B-210ENST00000487286 WRNQ14191 1432 aaPredicted RBP eCLIP13.47□□□□□ -0.25
PPM1B-210ENST00000487286 MAGI1Q96QZ7 1491 aaPredicted RBP13.45□□□□□ -0.26
PPM1B-210ENST00000487286 CLASP1Q7Z460 1538 aa13.43□□□□□ -0.26
PPM1B-210ENST00000487286 SYNJ2O15056 1496 aa13.42□□□□□ -0.26
PPM1B-210ENST00000487286 CHMP7Q8WUX9 453 aaPredicted RBP13.4□□□□□ -0.26
PPM1B-210ENST00000487286 ARAP1Q96P48 1450 aa13.4□□□□□ -0.26
PPM1B-210ENST00000487286 ADAMTS12P58397 1594 aa13.39□□□□□ -0.27
PPM1B-210ENST00000487286 CYB5RLQ6IPT4 315 aa13.35□□□□□ -0.27
PPM1B-210ENST00000487286 CEP170Q5SW79 1584 aa13.33□□□□□ -0.28
PPM1B-210ENST00000487286 GRIN2AQ12879 1464 aa13.33□□□□□ -0.28
PPM1B-210ENST00000487286 ERCC6L2Q5T890 1561 aa13.31□□□□□ -0.28
PPM1B-210ENST00000487286 ERICH3Q5RHP9 1530 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms