RNA–Protein interactions for RNA: ENST00000439255.1

RPL35A-203, Transcript of ribosomal protein L35a, humanhuman

TSL 5

Gene RPL35A, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35A-203ENST00000439255 AEBP2Q6ZN18 517 aaPredicted RBP22.74■■□□□ 1.23
RPL35A-203ENST00000439255 CHIC1Q5VXU3 224 aa21.94■■□□□ 1.1
RPL35A-203ENST00000439255 PHF23Q9BUL5 403 aaPredicted RBP19.39■□□□□ 0.69
RPL35A-203ENST00000439255 SENP3Q9H4L4 574 aaPredicted RBP19.12■□□□□ 0.65
RPL35A-203ENST00000439255 FOXD1Q16676 465 aa17.89■□□□□ 0.45
RPL35A-203ENST00000439255 PLPPR3Q6T4P5 718 aa17.67■□□□□ 0.42
RPL35A-203ENST00000439255 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
RPL35A-203ENST00000439255 ADRA2BP18089 450 aa17.11■□□□□ 0.33
RPL35A-203ENST00000439255 PIAS4Q8N2W9 510 aaPredicted RBP16.77■□□□□ 0.28
RPL35A-203ENST00000439255 MSH5O43196 834 aa16.4■□□□□ 0.22
RPL35A-203ENST00000439255 PPP4R3CPQ6ZMV5 832 aa15.62■□□□□ 0.09
RPL35A-203ENST00000439255 MAPK8IP2Q13387 824 aaPredicted RBP15.6■□□□□ 0.09
RPL35A-203ENST00000439255 SCAF1Q9H7N4 1312 aaKnown RBP15.42■□□□□ 0.06
RPL35A-203ENST00000439255 POTEDQ86YR6 584 aa15.32■□□□□ 0.04
RPL35A-203ENST00000439255 DMRT2Q9Y5R5 561 aa15.3■□□□□ 0.04
RPL35A-203ENST00000439255 KCNA4P22459 653 aa15.18■□□□□ 0.02
RPL35A-203ENST00000439255 CNKSR2Q8WXI2 1034 aa15.15■□□□□ 0.02
RPL35A-203ENST00000439255 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
RPL35A-203ENST00000439255 NPM3O75607 178 aaKnown RBP14.99□□□□□ -0.01
RPL35A-203ENST00000439255 HOXD11P31277 338 aaPredicted RBP14.92□□□□□ -0.02
RPL35A-203ENST00000439255 RNF216Q9NWF9 866 aaPredicted RBP14.9□□□□□ -0.02
RPL35A-203ENST00000439255 DCAF8L1A6NGE4 600 aa14.62□□□□□ -0.07
RPL35A-203ENST00000439255 DNAJC5BQ9UF47 199 aa14.48□□□□□ -0.09
RPL35A-203ENST00000439255 SLC4A1APQ9BWU0 796 aaKnown RBP14.33□□□□□ -0.12
RPL35A-203ENST00000439255 SLC4A2P04920 1241 aa14.24□□□□□ -0.13
RPL35A-203ENST00000439255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.17□□□□□ -0.143e-6■□□□□ 8.6
RPL35A-203ENST00000439255 RNF39Q9H2S5 420 aa14.14□□□□□ -0.15
RPL35A-203ENST00000439255 ZBTB22O15209 634 aa14.04□□□□□ -0.16
RPL35A-203ENST00000439255 U3KPZ7 1027 aaPredicted RBP14.03□□□□□ -0.16
RPL35A-203ENST00000439255 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
RPL35A-203ENST00000439255 C1QBPQ07021 282 aaKnown RBP13.87□□□□□ -0.19
RPL35A-203ENST00000439255 EHMT2Q96KQ7 1210 aa13.84□□□□□ -0.19
RPL35A-203ENST00000439255 CACNB1Q02641 598 aaPredicted RBP13.82□□□□□ -0.2
RPL35A-203ENST00000439255 MYCNP04198 464 aaPredicted RBP13.76□□□□□ -0.21
RPL35A-203ENST00000439255 CSRNP3Q8WYN3 585 aa13.76□□□□□ -0.21
RPL35A-203ENST00000439255 SPINK5Q9NQ38 1064 aaPredicted RBP13.71□□□□□ -0.21
RPL35A-203ENST00000439255 SAMD1Q6SPF0 538 aaPredicted RBP13.59□□□□□ -0.23
RPL35A-203ENST00000439255 ATF5Q9Y2D1 282 aaPredicted RBP13.59□□□□□ -0.23
RPL35A-203ENST00000439255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.58□□□□□ -0.24
RPL35A-203ENST00000439255 HNRNPUL2Q1KMD3 747 aaKnown RBP13.58□□□□□ -0.24
RPL35A-203ENST00000439255 CAPN15O75808 1086 aa13.55□□□□□ -0.24
RPL35A-203ENST00000439255 TRHP20396 242 aaPredicted RBP13.48□□□□□ -0.25
RPL35A-203ENST00000439255 APLP2Q06481 763 aa13.42□□□□□ -0.26
RPL35A-203ENST00000439255 DSG3P32926 999 aa13.41□□□□□ -0.26
RPL35A-203ENST00000439255 ZNF219Q9P2Y4 722 aaPredicted RBP13.38□□□□□ -0.27
RPL35A-203ENST00000439255 ABCB7O75027 752 aa13.37□□□□□ -0.27
RPL35A-203ENST00000439255 ATXN8OSP0DMR3 200 aa13.36□□□□□ -0.27
RPL35A-203ENST00000439255 POLA2Q14181 598 aa13.23□□□□□ -0.29
RPL35A-203ENST00000439255 NISCHQ9Y2I1 1504 aa13.13□□□□□ -0.31
RPL35A-203ENST00000439255 MKRN4PQ13434 485 aaPredicted RBP12.97□□□□□ -0.33
RPL35A-203ENST00000439255 ZBTB12Q9Y330 459 aaPredicted RBP12.86□□□□□ -0.35
RPL35A-203ENST00000439255 OSCARQ8IYS5 282 aa12.84□□□□□ -0.35
RPL35A-203ENST00000439255 FBLN2P98095 1184 aa12.79□□□□□ -0.36
RPL35A-203ENST00000439255 RBM42Q9BTD8 480 aaKnown RBP12.63□□□□□ -0.39
RPL35A-203ENST00000439255 SPDYE2BA6NHP3 402 aa12.57□□□□□ -0.4
RPL35A-203ENST00000439255 SPDYE6P0CI01 402 aa12.57□□□□□ -0.4
RPL35A-203ENST00000439255 SPDYE2Q495Y8 402 aa12.57□□□□□ -0.4
RPL35A-203ENST00000439255 SSUH2Q9Y2M2 353 aa12.54□□□□□ -0.4
RPL35A-203ENST00000439255 ZNF692Q9BU19 519 aaPredicted RBP12.52□□□□□ -0.41
RPL35A-203ENST00000439255 AKT1S1Q96B36 256 aa12.5□□□□□ -0.41
RPL35A-203ENST00000439255 SPDYE4A6NLX3 237 aa12.48□□□□□ -0.41
RPL35A-203ENST00000439255 REM2Q8IYK8 340 aaPredicted RBP12.46□□□□□ -0.41
RPL35A-203ENST00000439255 PABPN1Q86U42 306 aaKnown RBP eCLIP12.4□□□□□ -0.42
RPL35A-203ENST00000439255 FKBP8Q14318 412 aa12.39□□□□□ -0.43
RPL35A-203ENST00000439255 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
RPL35A-203ENST00000439255 PROM2Q8N271 834 aa12.31□□□□□ -0.44
RPL35A-203ENST00000439255 CHRDL2Q6WN34 429 aa12.27□□□□□ -0.45
RPL35A-203ENST00000439255 CLEC11AQ9Y240 323 aa12.23□□□□□ -0.45
RPL35A-203ENST00000439255 SPDYE1Q8NFV5 336 aaPredicted RBP12.22□□□□□ -0.45
RPL35A-203ENST00000439255 PIP4P2Q8N4L2 257 aa12.13□□□□□ -0.47
RPL35A-203ENST00000439255 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.47
RPL35A-203ENST00000439255 POTEHQ6S545 545 aa12.06□□□□□ -0.48
RPL35A-203ENST00000439255 PRR29P0C7W0 189 aa12.05□□□□□ -0.48
RPL35A-203ENST00000439255 CHADLQ6NUI6 762 aa12.03□□□□□ -0.48
RPL35A-203ENST00000439255 STAG3Q9UJ98 1225 aa12.01□□□□□ -0.49
RPL35A-203ENST00000439255 PRKAR2AP13861 404 aaKnown RBP11.99□□□□□ -0.49
RPL35A-203ENST00000439255 CREBZFQ9NS37 354 aa11.98□□□□□ -0.49
RPL35A-203ENST00000439255 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
RPL35A-203ENST00000439255 FBXO3Q9UK99 471 aa11.84□□□□□ -0.51
RPL35A-203ENST00000439255 FARP1Q9Y4F1 1045 aaPredicted RBP11.83□□□□□ -0.52
RPL35A-203ENST00000439255 VASPP50552 380 aaPredicted RBP11.82□□□□□ -0.52
RPL35A-203ENST00000439255 MIER1Q8N108 512 aa11.82□□□□□ -0.52
RPL35A-203ENST00000439255 EVX2Q03828 476 aa11.77□□□□□ -0.53
RPL35A-203ENST00000439255 PLCD3Q8N3E9 789 aa11.76□□□□□ -0.53
RPL35A-203ENST00000439255 C19orf67A6NJJ6 358 aa11.71□□□□□ -0.53
RPL35A-203ENST00000439255 HAX1O00165 279 aa11.71□□□□□ -0.53
RPL35A-203ENST00000439255 IFNLR1Q8IU57 520 aaPredicted RBP11.7□□□□□ -0.54
RPL35A-203ENST00000439255 CD44P16070 742 aaKnown RBP11.63□□□□□ -0.55
RPL35A-203ENST00000439255 RASEFQ8IZ41 740 aa11.63□□□□□ -0.55
RPL35A-203ENST00000439255 PLEKHG5O94827 1062 aa11.62□□□□□ -0.55
RPL35A-203ENST00000439255 NUBP1P53384 320 aa11.62□□□□□ -0.55
RPL35A-203ENST00000439255 NPM1P06748 294 aaKnown RBP eCLIP11.6□□□□□ -0.55
RPL35A-203ENST00000439255 KLHL34Q8N239 644 aa11.58□□□□□ -0.56
RPL35A-203ENST00000439255 TSPYL2Q9H2G4 693 aaPredicted RBP11.54□□□□□ -0.56
RPL35A-203ENST00000439255 ZBTB47Q9UFB7 747 aaPredicted RBP11.54□□□□□ -0.56
RPL35A-203ENST00000439255 ZRANB1Q9UGI0 708 aa11.54□□□□□ -0.56
RPL35A-203ENST00000439255 SP7Q8TDD2 431 aaPredicted RBP11.52□□□□□ -0.57
RPL35A-203ENST00000439255 PHF12Q96QT6 1004 aa11.5□□□□□ -0.57
RPL35A-203ENST00000439255 SPOCK2Q92563 424 aa11.48□□□□□ -0.57
RPL35A-203ENST00000439255 CCDC61Q9Y6R9 512 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 1266.5 ms