Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CD3DP04234 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.28■■□□□ 1
CD3DP04234 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.28■■□□□ 1
CD3DP04234 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
CD3DP04234 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CD3DP04234 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CD3DP04234 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CD3DP04234 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
CD3DP04234 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.27■■□□□ 1
CD3DP04234 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD3DP04234 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD3DP04234 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.27■□□□□ 0.99
CD3DP04234 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD3DP04234 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD3DP04234 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD3DP04234 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CD3DP04234 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CD3DP04234 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.25■□□□□ 0.99
CD3DP04234 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD3DP04234 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.25■□□□□ 0.99
CD3DP04234 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD3DP04234 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.25■□□□□ 0.99
CD3DP04234 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD3DP04234 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.25■□□□□ 0.99
CD3DP04234 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CD3DP04234 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD3DP04234 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CD3DP04234 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CD3DP04234 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.24■□□□□ 0.99
CD3DP04234 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CD3DP04234 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD3DP04234 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD3DP04234 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.23■□□□□ 0.99
CD3DP04234 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CD3DP04234 AC093323.1-202ENST00000635031 2045 ntBASIC21.22■□□□□ 0.99
CD3DP04234 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD3DP04234 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CD3DP04234 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD3DP04234 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.22■□□□□ 0.99
CD3DP04234 AC018358.1-201ENST00000631079 1402 ntBASIC21.21■□□□□ 0.99
CD3DP04234 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CD3DP04234 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.21■□□□□ 0.99
CD3DP04234 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD3DP04234 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.21■□□□□ 0.99
CD3DP04234 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CD3DP04234 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.21■□□□□ 0.99
CD3DP04234 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD3DP04234 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.21■□□□□ 0.99
CD3DP04234 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD3DP04234 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CD3DP04234 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD3DP04234 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD3DP04234 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.98
CD3DP04234 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.2■□□□□ 0.98
CD3DP04234 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CD3DP04234 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CD3DP04234 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD3DP04234 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CD3DP04234 DUSP8P4-201ENST00000399538 1761 ntBASIC21.19■□□□□ 0.98
CD3DP04234 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.19■□□□□ 0.98
CD3DP04234 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.19■□□□□ 0.98
CD3DP04234 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD3DP04234 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.18■□□□□ 0.98
CD3DP04234 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CD3DP04234 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.17■□□□□ 0.98
CD3DP04234 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD3DP04234 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD3DP04234 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.17■□□□□ 0.98
CD3DP04234 AC092803.2-201ENST00000564287 1899 ntBASIC21.17■□□□□ 0.98
CD3DP04234 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CD3DP04234 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD3DP04234 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.16■□□□□ 0.98
CD3DP04234 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.16■□□□□ 0.98
CD3DP04234 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD3DP04234 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD3DP04234 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD3DP04234 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.15■□□□□ 0.98
CD3DP04234 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.15■□□□□ 0.98
CD3DP04234 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CD3DP04234 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CD3DP04234 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.14■□□□□ 0.97
CD3DP04234 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CD3DP04234 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CD3DP04234 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.14■□□□□ 0.97
CD3DP04234 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CD3DP04234 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD3DP04234 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD3DP04234 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD3DP04234 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.13■□□□□ 0.97
CD3DP04234 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CD3DP04234 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD3DP04234 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.12■□□□□ 0.97
CD3DP04234 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.12■□□□□ 0.97
CD3DP04234 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CD3DP04234 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CD3DP04234 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CD3DP04234 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.11■□□□□ 0.97
CD3DP04234 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CD3DP04234 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CD3DP04234 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms