Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 DYNLL1-208ENST00000550178 581 ntBASIC19.47■□□□□ 0.71
PDE6DO43924 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.47■□□□□ 0.71
PDE6DO43924 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PDE6DO43924 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDE6DO43924 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PDE6DO43924 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
PDE6DO43924 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.46■□□□□ 0.71
PDE6DO43924 DUSP8P4-201ENST00000399538 1761 ntBASIC19.46■□□□□ 0.71
PDE6DO43924 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDE6DO43924 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PDE6DO43924 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6DO43924 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6DO43924 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6DO43924 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6DO43924 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6DO43924 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PDE6DO43924 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.44■□□□□ 0.7
PDE6DO43924 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6DO43924 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6DO43924 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6DO43924 AP002414.2-202ENST00000590929 1450 ntBASIC19.43■□□□□ 0.7
PDE6DO43924 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6DO43924 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6DO43924 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6DO43924 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6DO43924 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.43■□□□□ 0.7
PDE6DO43924 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6DO43924 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6DO43924 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6DO43924 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6DO43924 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6DO43924 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6DO43924 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.41■□□□□ 0.7
PDE6DO43924 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6DO43924 AC100797.4-201ENST00000631653 1827 ntBASIC19.41■□□□□ 0.7
PDE6DO43924 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDE6DO43924 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.39■□□□□ 0.69
PDE6DO43924 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.39■□□□□ 0.69
PDE6DO43924 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6DO43924 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6DO43924 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6DO43924 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6DO43924 AC092803.2-201ENST00000564287 1899 ntBASIC19.39■□□□□ 0.69
PDE6DO43924 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.39■□□□□ 0.69
PDE6DO43924 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6DO43924 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6DO43924 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PDE6DO43924 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PDE6DO43924 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6DO43924 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6DO43924 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6DO43924 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6DO43924 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.37■□□□□ 0.69
PDE6DO43924 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6DO43924 AC127502.1-201ENST00000399971 1502 ntBASIC19.36■□□□□ 0.69
PDE6DO43924 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDE6DO43924 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PDE6DO43924 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDE6DO43924 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDE6DO43924 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDE6DO43924 AL031258.1-201ENST00000623562 325 ntBASIC19.35■□□□□ 0.69
PDE6DO43924 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.35■□□□□ 0.69
PDE6DO43924 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDE6DO43924 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PDE6DO43924 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PDE6DO43924 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6DO43924 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDE6DO43924 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDE6DO43924 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.32■□□□□ 0.68
PDE6DO43924 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6DO43924 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6DO43924 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PDE6DO43924 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
PDE6DO43924 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6DO43924 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6DO43924 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6DO43924 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6DO43924 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6DO43924 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6DO43924 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6DO43924 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6DO43924 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6DO43924 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.3■□□□□ 0.68
PDE6DO43924 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6DO43924 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6DO43924 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6DO43924 AC018358.1-201ENST00000631079 1402 ntBASIC19.3■□□□□ 0.68
PDE6DO43924 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.3■□□□□ 0.68
PDE6DO43924 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6DO43924 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6DO43924 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PDE6DO43924 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.29■□□□□ 0.68
PDE6DO43924 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.29■□□□□ 0.68
PDE6DO43924 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6DO43924 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6DO43924 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6DO43924 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PDE6DO43924 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PDE6DO43924 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PDE6DO43924 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms