Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
KPNA4O00629 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
KPNA4O00629 AC108673.1-201ENST00000510422 1159 ntBASIC23.26■■□□□ 1.31
KPNA4O00629 AL449106.1-201ENST00000608517 1980 ntBASIC23.26■■□□□ 1.31
KPNA4O00629 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.26■■□□□ 1.31
KPNA4O00629 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
KPNA4O00629 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KPNA4O00629 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.25■■□□□ 1.31
KPNA4O00629 MIR6090-201ENST00000622481 60 ntBASIC23.25■■□□□ 1.31
KPNA4O00629 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.25■■□□□ 1.31
KPNA4O00629 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
KPNA4O00629 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
KPNA4O00629 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
KPNA4O00629 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KPNA4O00629 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KPNA4O00629 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
KPNA4O00629 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.23■■□□□ 1.31
KPNA4O00629 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
KPNA4O00629 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.22■■□□□ 1.31
KPNA4O00629 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KPNA4O00629 MIR3665-201ENST00000578708 105 ntBASIC23.22■■□□□ 1.31
KPNA4O00629 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KPNA4O00629 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KPNA4O00629 BX255925.1-201ENST00000566954 1854 ntBASIC23.22■■□□□ 1.31
KPNA4O00629 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.21■■□□□ 1.31
KPNA4O00629 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.21■■□□□ 1.31
KPNA4O00629 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
KPNA4O00629 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KPNA4O00629 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
KPNA4O00629 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
KPNA4O00629 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.19■■□□□ 1.3
KPNA4O00629 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KPNA4O00629 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KPNA4O00629 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
KPNA4O00629 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.19■■□□□ 1.3
KPNA4O00629 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.19■■□□□ 1.3
KPNA4O00629 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
KPNA4O00629 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KPNA4O00629 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
KPNA4O00629 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KPNA4O00629 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
KPNA4O00629 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
KPNA4O00629 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KPNA4O00629 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.17■■□□□ 1.3
KPNA4O00629 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
KPNA4O00629 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
KPNA4O00629 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
KPNA4O00629 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.17■■□□□ 1.3
KPNA4O00629 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.16■■□□□ 1.3
KPNA4O00629 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.16■■□□□ 1.3
KPNA4O00629 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
KPNA4O00629 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.16■■□□□ 1.3
KPNA4O00629 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KPNA4O00629 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.16■■□□□ 1.3
KPNA4O00629 AP006261.1-201ENST00000584783 668 ntBASIC23.16■■□□□ 1.3
KPNA4O00629 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KPNA4O00629 AC135983.2-203ENST00000454486 1613 ntBASIC23.15■■□□□ 1.3
KPNA4O00629 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.15■■□□□ 1.3
KPNA4O00629 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KPNA4O00629 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
KPNA4O00629 WHAMMP2-203ENST00000563942 1603 ntBASIC23.15■■□□□ 1.3
KPNA4O00629 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
KPNA4O00629 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
KPNA4O00629 LINC01003-201ENST00000564834 1764 ntBASIC23.14■■□□□ 1.3
KPNA4O00629 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
KPNA4O00629 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KPNA4O00629 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
KPNA4O00629 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
KPNA4O00629 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
KPNA4O00629 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
KPNA4O00629 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.13■■□□□ 1.29
KPNA4O00629 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.13■■□□□ 1.29
KPNA4O00629 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
KPNA4O00629 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
KPNA4O00629 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.12■■□□□ 1.29
KPNA4O00629 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.12■■□□□ 1.29
KPNA4O00629 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
KPNA4O00629 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.11■■□□□ 1.29
KPNA4O00629 AL162393.1-201ENST00000437852 946 ntBASIC23.11■■□□□ 1.29
KPNA4O00629 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
KPNA4O00629 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
KPNA4O00629 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
KPNA4O00629 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.1■■□□□ 1.29
KPNA4O00629 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KPNA4O00629 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KPNA4O00629 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KPNA4O00629 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.09■■□□□ 1.29
KPNA4O00629 AP002414.2-202ENST00000590929 1450 ntBASIC23.09■■□□□ 1.29
KPNA4O00629 AC087741.3-201ENST00000624270 1347 ntBASIC23.08■■□□□ 1.29
KPNA4O00629 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.08■■□□□ 1.29
KPNA4O00629 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
KPNA4O00629 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.08■■□□□ 1.29
KPNA4O00629 LINC00273-201ENST00000539813 1452 ntBASIC23.08■■□□□ 1.29
KPNA4O00629 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
KPNA4O00629 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
KPNA4O00629 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.08■■□□□ 1.28
KPNA4O00629 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.07■■□□□ 1.28
KPNA4O00629 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.07■■□□□ 1.28
KPNA4O00629 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
KPNA4O00629 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms