RNA–Protein interactions for RNA: snR62

snR62, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR62, Length 100 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR62snR62 FAP1P53971 965 aa11.37□□□□□ -0.59
snR62snR62 PRY3P47033 881 aa10.76□□□□□ -0.69
snR62snR62 HAA1Q12753 694 aaKnown RBP10.03□□□□□ -0.8
snR62snR62 YCK3P39962 524 aa9.92□□□□□ -0.82
snR62snR62 AAD16Q02895 342 aa9.61□□□□□ -0.87
snR62snR62 PRI1P10363 409 aa9.3□□□□□ -0.92
snR62snR62 BUD31P25337 157 aaPredicted RBP9.23□□□□□ -0.93
snR62snR62 MTC1P47018 478 aaKnown RBP9.23□□□□□ -0.93
snR62snR62 YGL015CP33199 130 aa8.82□□□□□ -1
snR62snR62 TSR3Q12094 313 aaKnown RBP8.59□□□□□ -1.03
snR62snR62 SIS1P25294 352 aaKnown RBP8.55□□□□□ -1.04
snR62snR62 MRPL32P25348 183 aa8.38□□□□□ -1.07
snR62snR62 ISW2Q08773 1120 aa8.32□□□□□ -1.08
snR62snR62 RPG1P38249 964 aaKnown RBP8.23□□□□□ -1.09
snR62snR62 UBP9P39967 754 aa8.02□□□□□ -1.13
snR62snR62 UBP10P53874 792 aaPredicted RBP7.63□□□□□ -1.19
snR62snR62 MAP2P38174 421 aaKnown RBP7.46□□□□□ -1.22
snR62snR62 TIF4632P39936 914 aaKnown RBP7.39□□□□□ -1.23
snR62snR62 TGL3P40308 642 aa7.37□□□□□ -1.23
snR62snR62 CDC27P38042 758 aa7.34□□□□□ -1.23
snR62snR62 RGA2Q06407 1009 aa7.29□□□□□ -1.24
snR62snR62 YJL171CP46992 396 aa7.12□□□□□ -1.27
snR62snR62 SLX5P32828 619 aaKnown RBP6.98□□□□□ -1.29
snR62snR62 YBL029C-AQ3E756 94 aa6.97□□□□□ -1.29
snR62snR62 REB1P21538 810 aa6.95□□□□□ -1.3
snR62snR62 AIR2Q12476 344 aaKnown RBP6.92□□□□□ -1.3
snR62snR62 SCY1P53009 804 aa6.84□□□□□ -1.31
snR62snR62 VNX1P42839 908 aa6.81□□□□□ -1.32
snR62snR62 FKH1P40466 484 aa6.77□□□□□ -1.33
snR62snR62 SPP1Q03012 353 aa6.77□□□□□ -1.33
snR62snR62 RSE1Q04693 1361 aaKnown RBP6.76□□□□□ -1.33
snR62snR62 BMT6Q12291 365 aa6.73□□□□□ -1.33
snR62snR62 MST1P07236 462 aa6.71□□□□□ -1.34
snR62snR62 YKR023WP36119 530 aaKnown RBP6.69□□□□□ -1.34
snR62snR62 RPL17AP05740 184 aaKnown RBP6.67□□□□□ -1.34
snR62snR62 RGA1P39083 1007 aa6.67□□□□□ -1.34
snR62snR62 RPL17BP46990 184 aaKnown RBP6.67□□□□□ -1.34
snR62snR62 TFC8Q12308 588 aa6.59□□□□□ -1.35
snR62snR62 DCD1P06773 312 aa6.56□□□□□ -1.36
snR62snR62 YOR238WQ08634 303 aa6.56□□□□□ -1.36
snR62snR62 HOP09932 586 aa6.55□□□□□ -1.36
snR62snR62 TIF11P38912 153 aaKnown RBP6.5□□□□□ -1.37
snR62snR62 WSC3Q12215 556 aa6.44□□□□□ -1.38
snR62snR62 LDB19Q12502 818 aa6.41□□□□□ -1.38
snR62snR62 BCK2P33306 851 aa6.35□□□□□ -1.39
snR62snR62 BCH2P36122 765 aa6.26□□□□□ -1.41
snR62snR62 NSR1P27476 414 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
snR62snR62 ULI1P43604 169 aa6.23□□□□□ -1.41
snR62snR62 IOC2Q12072 812 aa6.23□□□□□ -1.41
snR62snR62 DIP2Q12220 943 aaPredicted RBP6.18□□□□□ -1.42
snR62snR62 SPT21P35209 758 aa6.14□□□□□ -1.43
snR62snR62 YAP5P40574 245 aa6.13□□□□□ -1.43
snR62snR62 GTT3P39996 337 aa6.11□□□□□ -1.43
snR62snR62 NCR1Q12200 1170 aa6.1□□□□□ -1.43
snR62snR62 RTG1P32607 177 aa6.04□□□□□ -1.44
snR62snR62 XDJ1P39102 459 aa6.03□□□□□ -1.44
snR62snR62 DPS1P04802 557 aaKnown RBP6.02□□□□□ -1.45
snR62snR62 AVT3P36062 692 aa6.02□□□□□ -1.45
snR62snR62 CHL1P22516 861 aaPredicted RBP6.01□□□□□ -1.45
snR62snR62 BDF1P35817 686 aa5.96□□□□□ -1.46
snR62snR62 EAP1P36041 632 aaKnown RBP5.96□□□□□ -1.46
snR62snR62 SEC61P32915 480 aa5.94□□□□□ -1.46
snR62snR62 DRS1P32892 752 aaKnown RBP5.92□□□□□ -1.46
snR62snR62 EPS1P40557 701 aa5.91□□□□□ -1.46
snR62snR62 TFG1P41895 735 aaPredicted RBP5.88□□□□□ -1.47
snR62snR62 MSB4Q12317 492 aa5.88□□□□□ -1.47
snR62snR62 YNL035CP53962 389 aaKnown RBP5.86□□□□□ -1.47
snR62snR62 PRE3P38624 215 aa5.85□□□□□ -1.47
snR62snR62 SRC1Q03707 834 aa5.84□□□□□ -1.47
snR62snR62 VRP1P37370 817 aa5.82□□□□□ -1.48
snR62snR62 SAP30P38429 201 aa5.81□□□□□ -1.48
snR62snR62 TRP5P00931 707 aaKnown RBP5.77□□□□□ -1.49
snR62snR62 YPL062WQ02781 134 aa5.72□□□□□ -1.49
snR62snR62 YDL129WQ07555 291 aa5.66□□□□□ -1.5
snR62snR62 SET4P42948 560 aa5.59□□□□□ -1.51
snR62snR62 YOL036WQ08206 761 aa5.56□□□□□ -1.52
snR62snR62 PIB1Q06651 286 aa5.5□□□□□ -1.53
snR62snR62 DAN4P47179 1161 aa5.49□□□□□ -1.53
snR62snR62 JIP4Q03361 876 aa5.49□□□□□ -1.53
snR62snR62 BBC1P47068 1157 aa5.44□□□□□ -1.54
snR62snR62 ELP4Q02884 456 aaKnown RBP5.39□□□□□ -1.55
snR62snR62 RIM101P33400 625 aa5.38□□□□□ -1.55
snR62snR62 TRK1P12685 1235 aa5.34□□□□□ -1.55
snR62snR62 GBP2P25555 427 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
snR62snR62 PTC4P38089 393 aa5.23□□□□□ -1.57
snR62snR62 ABP1P15891 592 aaKnown RBP5.22□□□□□ -1.57
snR62snR62 YDR344CQ05510 147 aa5.22□□□□□ -1.57
snR62snR62 RAS1P01119 309 aa5.2□□□□□ -1.58
snR62snR62 SAM3Q08986 587 aa5.19□□□□□ -1.58
snR62snR62 PTP3P40048 928 aa5.18□□□□□ -1.58
snR62snR62 AI2P03876 854 aa5.16□□□□□ -1.58
snR62snR62 ARH1P48360 493 aa5.16□□□□□ -1.58
snR62snR62 SPT23P35210 1082 aa5.15□□□□□ -1.59
snR62snR62 GAR1P28007 205 aaKnown RBP5.14□□□□□ -1.59
snR62snR62 HTA1P04911 132 aaKnown RBP5.13□□□□□ -1.59
snR62snR62 HTA2P04912 132 aa5.13□□□□□ -1.59
snR62snR62 MTC5Q03897 1148 aa5.13□□□□□ -1.59
snR62snR62 YEL023CP39992 682 aa5.12□□□□□ -1.59
snR62snR62 YIL055CP40523 627 aaKnown RBP5.12□□□□□ -1.59
snR62snR62 PEX29Q03370 554 aa5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms