RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 MTC1P47018 478 aaKnown RBP10.13□□□□□ -0.79
snR55snR55 FAP1P53971 965 aa9.48□□□□□ -0.89
snR55snR55 DRS1P32892 752 aaKnown RBP9.05□□□□□ -0.96
snR55snR55 PRY3P47033 881 aa8.96□□□□□ -0.98
snR55snR55 PRI1P10363 409 aa8.76□□□□□ -1.01
snR55snR55 AAD16Q02895 342 aa8.72□□□□□ -1.01
snR55snR55 YCK3P39962 524 aa8.57□□□□□ -1.04
snR55snR55 ISW2Q08773 1120 aa8.43□□□□□ -1.06
snR55snR55 RPG1P38249 964 aaKnown RBP8.39□□□□□ -1.07
snR55snR55 HAA1Q12753 694 aaKnown RBP8.37□□□□□ -1.07
snR55snR55 TSR3Q12094 313 aaKnown RBP8.25□□□□□ -1.09
snR55snR55 DIP2Q12220 943 aaPredicted RBP8.08□□□□□ -1.12
snR55snR55 RSE1Q04693 1361 aaKnown RBP7.91□□□□□ -1.14
snR55snR55 MRPL32P25348 183 aa7.88□□□□□ -1.15
snR55snR55 AVT3P36062 692 aa7.73□□□□□ -1.17
snR55snR55 RPL17AP05740 184 aaKnown RBP7.7□□□□□ -1.18
snR55snR55 RPL17BP46990 184 aaKnown RBP7.7□□□□□ -1.18
snR55snR55 YGL015CP33199 130 aa7.67□□□□□ -1.18
snR55snR55 REB1P21538 810 aa7.66□□□□□ -1.18
snR55snR55 CDC27P38042 758 aa7.51□□□□□ -1.21
snR55snR55 SPT21P35209 758 aa7.4□□□□□ -1.22
snR55snR55 YKR023WP36119 530 aaKnown RBP7.39□□□□□ -1.23
snR55snR55 BFR2Q06631 534 aaKnown RBP7.34□□□□□ -1.23
snR55snR55 MAP2P38174 421 aaKnown RBP7.29□□□□□ -1.24
snR55snR55 UBP10P53874 792 aaPredicted RBP7.29□□□□□ -1.24
snR55snR55 BUD31P25337 157 aaPredicted RBP7.24□□□□□ -1.25
snR55snR55 TFC8Q12308 588 aa7.22□□□□□ -1.25
snR55snR55 DCD1P06773 312 aa7.21□□□□□ -1.26
snR55snR55 HOP09932 586 aa7.21□□□□□ -1.26
snR55snR55 SCY1P53009 804 aa7.06□□□□□ -1.28
snR55snR55 RIM101P33400 625 aa7.03□□□□□ -1.28
snR55snR55 SLX5P32828 619 aaKnown RBP6.98□□□□□ -1.29
snR55snR55 BCH2P36122 765 aa6.97□□□□□ -1.29
snR55snR55 TGL3P40308 642 aa6.96□□□□□ -1.3
snR55snR55 TIF4632P39936 914 aaKnown RBP6.95□□□□□ -1.3
snR55snR55 UBP9P39967 754 aa6.82□□□□□ -1.32
snR55snR55 SIS1P25294 352 aaKnown RBP6.8□□□□□ -1.32
snR55snR55 OXP1P28273 1286 aa6.8□□□□□ -1.32
snR55snR55 EPS1P40557 701 aa6.76□□□□□ -1.33
snR55snR55 BDF1P35817 686 aa6.75□□□□□ -1.33
snR55snR55 MST1P07236 462 aa6.66□□□□□ -1.34
snR55snR55 PTP3P40048 928 aa6.63□□□□□ -1.35
snR55snR55 YIL055CP40523 627 aaKnown RBP6.6□□□□□ -1.35
snR55snR55 YBL029C-AQ3E756 94 aa6.6□□□□□ -1.35
snR55snR55 NSR1P27476 414 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
snR55snR55 YOR238WQ08634 303 aa6.57□□□□□ -1.36
snR55snR55 RSM7P47150 247 aa6.55□□□□□ -1.36
snR55snR55 AI2P03876 854 aa6.53□□□□□ -1.36
snR55snR55 VNX1P42839 908 aa6.51□□□□□ -1.37
snR55snR55 BBC1P47068 1157 aa6.51□□□□□ -1.37
snR55snR55 YAH1Q12184 172 aaKnown RBP6.49□□□□□ -1.37
snR55snR55 YAP5P40574 245 aa6.48□□□□□ -1.37
snR55snR55 SPP1Q03012 353 aa6.42□□□□□ -1.38
snR55snR55 WSC3Q12215 556 aa6.42□□□□□ -1.38
snR55snR55 YLR271WQ06152 274 aa6.41□□□□□ -1.38
snR55snR55 AIR2Q12476 344 aaKnown RBP6.37□□□□□ -1.39
snR55snR55 TIF11P38912 153 aaKnown RBP6.36□□□□□ -1.39
snR55snR55 FKH1P40466 484 aa6.36□□□□□ -1.39
snR55snR55 PSD2P53037 1138 aaKnown RBP6.36□□□□□ -1.39
snR55snR55 GTT3P39996 337 aa6.32□□□□□ -1.4
snR55snR55 PIB1Q06651 286 aa6.3□□□□□ -1.4
snR55snR55 MRM1P25270 412 aa6.27□□□□□ -1.41
snR55snR55 IOC2Q12072 812 aa6.27□□□□□ -1.41
snR55snR55 TFA1P36100 482 aa6.26□□□□□ -1.41
snR55snR55 LDB19Q12502 818 aa6.26□□□□□ -1.41
snR55snR55 ULI1P43604 169 aa6.24□□□□□ -1.41
snR55snR55 YJL171CP46992 396 aa6.24□□□□□ -1.41
snR55snR55 SSP1P38871 571 aa6.19□□□□□ -1.42
snR55snR55 VPS29P38759 282 aa6.18□□□□□ -1.42
snR55snR55 MSB4Q12317 492 aa6.18□□□□□ -1.42
snR55snR55 CST9Q06032 482 aa6.17□□□□□ -1.42
snR55snR55 YOL036WQ08206 761 aa6.17□□□□□ -1.42
snR55snR55 BMT6Q12291 365 aa6.16□□□□□ -1.42
snR55snR55 YMR1P47147 688 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
snR55snR55 ARP8Q12386 881 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
snR55snR55 EAP1P36041 632 aaKnown RBP6.14□□□□□ -1.43
snR55snR55 SET4P42948 560 aa6.14□□□□□ -1.43
snR55snR55 DBP1P24784 617 aaKnown RBP6.13□□□□□ -1.43
snR55snR55 STS1P38637 319 aa6.13□□□□□ -1.43
snR55snR55 TRP5P00931 707 aaKnown RBP6.12□□□□□ -1.43
snR55snR55 YFR006WP43590 535 aa6.12□□□□□ -1.43
snR55snR55 RTG1P32607 177 aa6.11□□□□□ -1.43
snR55snR55 VMA1P17255 1071 aaKnown RBP6.1□□□□□ -1.43
snR55snR55 RTG3P38165 486 aa6.1□□□□□ -1.43
snR55snR55 MGA2P40578 1113 aa6.09□□□□□ -1.43
snR55snR55 SAM3Q08986 587 aa6.09□□□□□ -1.43
snR55snR55 RCR1P38212 213 aa6.07□□□□□ -1.44
snR55snR55 YNL035CP53962 389 aaKnown RBP6.06□□□□□ -1.44
snR55snR55 NCR1Q12200 1170 aa6.06□□□□□ -1.44
snR55snR55 SEC61P32915 480 aa6.05□□□□□ -1.44
snR55snR55 DAN4P47179 1161 aa6.01□□□□□ -1.45
snR55snR55 GYP5Q12344 894 aa5.95□□□□□ -1.46
snR55snR55 ABP1P15891 592 aaKnown RBP5.94□□□□□ -1.46
snR55snR55 SAP30P38429 201 aa5.94□□□□□ -1.46
snR55snR55 JIP4Q03361 876 aa5.94□□□□□ -1.46
snR55snR55 HTA1P04911 132 aaKnown RBP5.91□□□□□ -1.46
snR55snR55 HTA2P04912 132 aa5.91□□□□□ -1.46
snR55snR55 DCW1P36091 449 aa5.91□□□□□ -1.46
snR55snR55 TFG1P41895 735 aaPredicted RBP5.91□□□□□ -1.46
snR55snR55 YDL129WQ07555 291 aa5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms