RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 FAP1P53971 965 aa8.32□□□□□ -1.08
snR53snR53 PRY3P47033 881 aa7.86□□□□□ -1.15
snR53snR53 YCK3P39962 524 aa7.29□□□□□ -1.24
snR53snR53 HAA1Q12753 694 aaKnown RBP7.23□□□□□ -1.25
snR53snR53 MTC1P47018 478 aaKnown RBP7.18□□□□□ -1.26
snR53snR53 AAD16Q02895 342 aa7.09□□□□□ -1.27
snR53snR53 PRI1P10363 409 aa6.93□□□□□ -1.3
snR53snR53 BUD31P25337 157 aaPredicted RBP6.54□□□□□ -1.36
snR53snR53 TSR3Q12094 313 aaKnown RBP6.51□□□□□ -1.37
snR53snR53 YGL015CP33199 130 aa6.41□□□□□ -1.38
snR53snR53 RPG1P38249 964 aaKnown RBP6.31□□□□□ -1.4
snR53snR53 ISW2Q08773 1120 aa6.31□□□□□ -1.4
snR53snR53 MRPL32P25348 183 aa6.25□□□□□ -1.41
snR53snR53 SIS1P25294 352 aaKnown RBP6.13□□□□□ -1.43
snR53snR53 UBP9P39967 754 aa5.77□□□□□ -1.49
snR53snR53 MAP2P38174 421 aaKnown RBP5.65□□□□□ -1.5
snR53snR53 UBP10P53874 792 aaPredicted RBP5.65□□□□□ -1.5
snR53snR53 CDC27P38042 758 aa5.64□□□□□ -1.51
snR53snR53 TIF4632P39936 914 aaKnown RBP5.47□□□□□ -1.53
snR53snR53 REB1P21538 810 aa5.45□□□□□ -1.54
snR53snR53 TGL3P40308 642 aa5.43□□□□□ -1.54
snR53snR53 RSE1Q04693 1361 aaKnown RBP5.36□□□□□ -1.55
snR53snR53 RPL17AP05740 184 aaKnown RBP5.32□□□□□ -1.56
snR53snR53 RPL17BP46990 184 aaKnown RBP5.32□□□□□ -1.56
snR53snR53 SLX5P32828 619 aaKnown RBP5.29□□□□□ -1.56
snR53snR53 SCY1P53009 804 aa5.27□□□□□ -1.57
snR53snR53 YBL029C-AQ3E756 94 aa5.24□□□□□ -1.57
snR53snR53 YKR023WP36119 530 aaKnown RBP5.23□□□□□ -1.57
snR53snR53 DCD1P06773 312 aa5.22□□□□□ -1.57
snR53snR53 DRS1P32892 752 aaKnown RBP5.2□□□□□ -1.58
snR53snR53 YJL171CP46992 396 aa5.19□□□□□ -1.58
snR53snR53 HOP09932 586 aa5.17□□□□□ -1.58
snR53snR53 TFC8Q12308 588 aa5.12□□□□□ -1.59
snR53snR53 DIP2Q12220 943 aaPredicted RBP5.1□□□□□ -1.59
snR53snR53 AIR2Q12476 344 aaKnown RBP5.1□□□□□ -1.59
snR53snR53 VNX1P42839 908 aa5.08□□□□□ -1.6
snR53snR53 SPP1Q03012 353 aa5.05□□□□□ -1.6
snR53snR53 RGA2Q06407 1009 aa5.01□□□□□ -1.61
snR53snR53 FKH1P40466 484 aa5□□□□□ -1.61
snR53snR53 MST1P07236 462 aa4.99□□□□□ -1.61
snR53snR53 YOR238WQ08634 303 aa4.94□□□□□ -1.62
snR53snR53 BMT6Q12291 365 aa4.94□□□□□ -1.62
snR53snR53 WSC3Q12215 556 aa4.93□□□□□ -1.62
snR53snR53 BCH2P36122 765 aa4.91□□□□□ -1.62
snR53snR53 SPT21P35209 758 aa4.9□□□□□ -1.63
snR53snR53 TIF11P38912 153 aaKnown RBP4.86□□□□□ -1.63
snR53snR53 LDB19Q12502 818 aa4.83□□□□□ -1.64
snR53snR53 ULI1P43604 169 aa4.72□□□□□ -1.65
snR53snR53 BDF1P35817 686 aa4.7□□□□□ -1.66
snR53snR53 IOC2Q12072 812 aa4.7□□□□□ -1.66
snR53snR53 NSR1P27476 414 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
snR53snR53 YAP5P40574 245 aa4.68□□□□□ -1.66
snR53snR53 RGA1P39083 1007 aa4.67□□□□□ -1.66
snR53snR53 GTT3P39996 337 aa4.67□□□□□ -1.66
snR53snR53 EPS1P40557 701 aa4.67□□□□□ -1.66
snR53snR53 BCK2P33306 851 aa4.66□□□□□ -1.66
snR53snR53 NCR1Q12200 1170 aa4.59□□□□□ -1.67
snR53snR53 RTG1P32607 177 aa4.58□□□□□ -1.68
snR53snR53 AVT3P36062 692 aa4.53□□□□□ -1.68
snR53snR53 EAP1P36041 632 aaKnown RBP4.48□□□□□ -1.69
snR53snR53 CHL1P22516 861 aaPredicted RBP4.46□□□□□ -1.7
snR53snR53 DPS1P04802 557 aaKnown RBP4.45□□□□□ -1.7
snR53snR53 SEC61P32915 480 aa4.45□□□□□ -1.7
snR53snR53 TRP5P00931 707 aaKnown RBP4.44□□□□□ -1.7
snR53snR53 PIB1Q06651 286 aa4.44□□□□□ -1.7
snR53snR53 SAP30P38429 201 aa4.43□□□□□ -1.7
snR53snR53 XDJ1P39102 459 aa4.43□□□□□ -1.7
snR53snR53 TFG1P41895 735 aaPredicted RBP4.43□□□□□ -1.7
snR53snR53 YNL035CP53962 389 aaKnown RBP4.43□□□□□ -1.7
snR53snR53 MSB4Q12317 492 aa4.43□□□□□ -1.7
snR53snR53 RIM101P33400 625 aa4.4□□□□□ -1.71
snR53snR53 VRP1P37370 817 aa4.38□□□□□ -1.71
snR53snR53 PRE3P38624 215 aa4.38□□□□□ -1.71
snR53snR53 SET4P42948 560 aa4.38□□□□□ -1.71
snR53snR53 BBC1P47068 1157 aa4.33□□□□□ -1.72
snR53snR53 SRC1Q03707 834 aa4.33□□□□□ -1.72
snR53snR53 YOL036WQ08206 761 aa4.33□□□□□ -1.72
snR53snR53 YDL129WQ07555 291 aa4.29□□□□□ -1.72
snR53snR53 PTP3P40048 928 aa4.27□□□□□ -1.73
snR53snR53 OXP1P28273 1286 aa4.22□□□□□ -1.73
snR53snR53 DAN4P47179 1161 aa4.22□□□□□ -1.73
snR53snR53 AI2P03876 854 aa4.21□□□□□ -1.74
snR53snR53 YIL055CP40523 627 aaKnown RBP4.21□□□□□ -1.74
snR53snR53 JIP4Q03361 876 aa4.17□□□□□ -1.74
snR53snR53 ELP4Q02884 456 aaKnown RBP4.15□□□□□ -1.75
snR53snR53 YDR344CQ05510 147 aa4.15□□□□□ -1.75
snR53snR53 YPL062WQ02781 134 aa4.12□□□□□ -1.75
snR53snR53 RSM7P47150 247 aa4.11□□□□□ -1.75
snR53snR53 VMA1P17255 1071 aaKnown RBP4.06□□□□□ -1.76
snR53snR53 PTC4P38089 393 aa4.05□□□□□ -1.76
snR53snR53 SAM3Q08986 587 aa4.05□□□□□ -1.76
snR53snR53 YFR006WP43590 535 aa4.03□□□□□ -1.76
snR53snR53 DBP1P24784 617 aaKnown RBP4.02□□□□□ -1.77
snR53snR53 YEL023CP39992 682 aa4.02□□□□□ -1.77
snR53snR53 HTA1P04911 132 aaKnown RBP4.01□□□□□ -1.77
snR53snR53 HTA2P04912 132 aa4.01□□□□□ -1.77
snR53snR53 PML39Q03760 334 aa4□□□□□ -1.77
snR53snR53 RAS1P01119 309 aa3.99□□□□□ -1.77
snR53snR53 ABP1P15891 592 aaKnown RBP3.99□□□□□ -1.77
snR53snR53 MRM1P25270 412 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms