RNA–Protein interactions for RNA: snR46

snR46, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR46, Length 197 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR46	snR46	MTC1	P47018	478 aa	Known RBP	9.29	□□□□□ -0.92
snR46	snR46	FAP1	P53971	965 aa		9.08	□□□□□ -0.96
snR46	snR46	PRY3	P47033	881 aa		8.51	□□□□□ -1.05
snR46	snR46	DRS1	P32892	752 aa	Known RBP	8.22	□□□□□ -1.09
snR46	snR46	AAD16	Q02895	342 aa		8.18	□□□□□ -1.1
snR46	snR46	PRI1	P10363	409 aa		8.12	□□□□□ -1.11
snR46	snR46	HAA1	Q12753	694 aa	Known RBP	7.93	□□□□□ -1.14
snR46	snR46	ISW2	Q08773	1120 aa		7.88	□□□□□ -1.15
snR46	snR46	YCK3	P39962	524 aa		7.85	□□□□□ -1.15
snR46	snR46	RPG1	P38249	964 aa	Known RBP	7.8	□□□□□ -1.16
snR46	snR46	TSR3	Q12094	313 aa	Known RBP	7.7	□□□□□ -1.18
snR46	snR46	MRPL32	P25348	183 aa		7.43	□□□□□ -1.22
snR46	snR46	DIP2	Q12220	943 aa	Predicted RBP	7.38	□□□□□ -1.23
snR46	snR46	RSE1	Q04693	1361 aa	Known RBP	7.28	□□□□□ -1.24
snR46	snR46	YGL015C	P33199	130 aa		7.25	□□□□□ -1.25
snR46	snR46	REB1	P21538	810 aa		7.15	□□□□□ -1.26
snR46	snR46	RPL17A	P05740	184 aa	Known RBP	7.09	□□□□□ -1.27
snR46	snR46	RPL17B	P46990	184 aa	Known RBP	7.09	□□□□□ -1.27
snR46	snR46	AVT3	P36062	692 aa		6.89	□□□□□ -1.31
snR46	snR46	CDC27	P38042	758 aa		6.87	□□□□□ -1.31
snR46	snR46	BUD31	P25337	157 aa	Predicted RBP	6.82	□□□□□ -1.32
snR46	snR46	MAP2	P38174	421 aa	Known RBP	6.75	□□□□□ -1.33
snR46	snR46	UBP10	P53874	792 aa	Predicted RBP	6.75	□□□□□ -1.33
snR46	snR46	YKR023W	P36119	530 aa	Known RBP	6.72	□□□□□ -1.33
snR46	snR46	HO	P09932	586 aa		6.65	□□□□□ -1.34
snR46	snR46	DCD1	P06773	312 aa		6.63	□□□□□ -1.35
snR46	snR46	SPT21	P35209	758 aa		6.63	□□□□□ -1.35
snR46	snR46	TFC8	Q12308	588 aa		6.6	□□□□□ -1.35
snR46	snR46	BFR2	Q06631	534 aa	Known RBP	6.59	□□□□□ -1.35
snR46	snR46	TIF4632	P39936	914 aa	Known RBP	6.56	□□□□□ -1.36
snR46	snR46	SCY1	P53009	804 aa		6.55	□□□□□ -1.36
snR46	snR46	SIS1	P25294	352 aa	Known RBP	6.54	□□□□□ -1.36
snR46	snR46	UBP9	P39967	754 aa		6.52	□□□□□ -1.37
snR46	snR46	SLX5	P32828	619 aa	Known RBP	6.5	□□□□□ -1.37
snR46	snR46	TGL3	P40308	642 aa		6.48	□□□□□ -1.37
snR46	snR46	BCH2	P36122	765 aa		6.38	□□□□□ -1.39
snR46	snR46	RIM101	P33400	625 aa		6.33	□□□□□ -1.4
snR46	snR46	EPS1	P40557	701 aa		6.18	□□□□□ -1.42
snR46	snR46	BDF1	P35817	686 aa		6.17	□□□□□ -1.42
snR46	snR46	YBL029C-A	Q3E756	94 aa		6.15	□□□□□ -1.42
snR46	snR46	YIL055C	P40523	627 aa	Known RBP	6.14	□□□□□ -1.43
snR46	snR46	YOR238W	Q08634	303 aa		6.14	□□□□□ -1.43
snR46	snR46	PTP3	P40048	928 aa		6.13	□□□□□ -1.43
snR46	snR46	MST1	P07236	462 aa		6.09	□□□□□ -1.43
snR46	snR46	OXP1	P28273	1286 aa		6.09	□□□□□ -1.43
snR46	snR46	VNX1	P42839	908 aa		6.04	□□□□□ -1.44
snR46	snR46	BBC1	P47068	1157 aa		6.04	□□□□□ -1.44
snR46	snR46	SPP1	Q03012	353 aa		6.04	□□□□□ -1.44
snR46	snR46	WSC3	Q12215	556 aa		6.02	□□□□□ -1.45
snR46	snR46	YAP5	P40574	245 aa		6	□□□□□ -1.45
snR46	snR46	YJL171C	P46992	396 aa		5.99	□□□□□ -1.45
snR46	snR46	RSM7	P47150	247 aa		5.98	□□□□□ -1.45
snR46	snR46	AI2	P03876	854 aa		5.96	□□□□□ -1.46
snR46	snR46	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.96	□□□□□ -1.46	not detected
snR46	snR46	GTT3	P39996	337 aa		5.95	□□□□□ -1.46
snR46	snR46	YAH1	Q12184	172 aa	Known RBP	5.95	□□□□□ -1.46
snR46	snR46	TIF11	P38912	153 aa	Known RBP	5.91	□□□□□ -1.46
snR46	snR46	AIR2	Q12476	344 aa	Known RBP	5.88	□□□□□ -1.47
snR46	snR46	FKH1	P40466	484 aa		5.83	□□□□□ -1.48
snR46	snR46	ULI1	P43604	169 aa		5.83	□□□□□ -1.48
snR46	snR46	PIB1	Q06651	286 aa		5.83	□□□□□ -1.48
snR46	snR46	LDB19	Q12502	818 aa		5.83	□□□□□ -1.48
snR46	snR46	BMT6	Q12291	365 aa		5.8	□□□□□ -1.48
snR46	snR46	IOC2	Q12072	812 aa		5.76	□□□□□ -1.49
snR46	snR46	YLR271W	Q06152	274 aa		5.74	□□□□□ -1.49
snR46	snR46	MRM1	P25270	412 aa		5.73	□□□□□ -1.49
snR46	snR46	EAP1	P36041	632 aa	Known RBP	5.72	□□□□□ -1.49
snR46	snR46	MSB4	Q12317	492 aa		5.71	□□□□□ -1.5
snR46	snR46	RTG1	P32607	177 aa		5.69	□□□□□ -1.5
snR46	snR46	SET4	P42948	560 aa		5.69	□□□□□ -1.5
snR46	snR46	PSD2	P53037	1138 aa	Known RBP	5.69	□□□□□ -1.5
snR46	snR46	NCR1	Q12200	1170 aa		5.69	□□□□□ -1.5
snR46	snR46	TFA1	P36100	482 aa		5.67	□□□□□ -1.5
snR46	snR46	TRP5	P00931	707 aa	Known RBP	5.65	□□□□□ -1.5
snR46	snR46	YOL036W	Q08206	761 aa		5.65	□□□□□ -1.5
snR46	snR46	TFG1	P41895	735 aa	Predicted RBP	5.64	□□□□□ -1.51
snR46	snR46	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.63	□□□□□ -1.51	not detected
snR46	snR46	DBP1	P24784	617 aa	Known RBP	5.62	□□□□□ -1.51
snR46	snR46	YMR1	P47147	688 aa	Known RBP RIP-Chip data	5.62	□□□□□ -1.51	not detected
snR46	snR46	YNL035C	P53962	389 aa	Known RBP	5.62	□□□□□ -1.51
snR46	snR46	YFR006W	P43590	535 aa		5.61	□□□□□ -1.51
snR46	snR46	SEC61	P32915	480 aa		5.6	□□□□□ -1.51
snR46	snR46	RTG3	P38165	486 aa		5.58	□□□□□ -1.52
snR46	snR46	SSP1	P38871	571 aa		5.57	□□□□□ -1.52
snR46	snR46	VPS29	P38759	282 aa		5.56	□□□□□ -1.52
snR46	snR46	VMA1	P17255	1071 aa	Known RBP	5.55	□□□□□ -1.52
snR46	snR46	SAP30	P38429	201 aa		5.54	□□□□□ -1.52
snR46	snR46	CST9	Q06032	482 aa		5.52	□□□□□ -1.53
snR46	snR46	STS1	P38637	319 aa		5.51	□□□□□ -1.53
snR46	snR46	SAM3	Q08986	587 aa		5.51	□□□□□ -1.53
snR46	snR46	JIP4	Q03361	876 aa		5.5	□□□□□ -1.53
snR46	snR46	BCK2	P33306	851 aa		5.49	□□□□□ -1.53
snR46	snR46	MGA2	P40578	1113 aa		5.49	□□□□□ -1.53
snR46	snR46	CHL1	P22516	861 aa	Predicted RBP	5.48	□□□□□ -1.53
snR46	snR46	YDL129W	Q07555	291 aa		5.48	□□□□□ -1.53
snR46	snR46	GYP5	Q12344	894 aa		5.48	□□□□□ -1.53
snR46	snR46	DCW1	P36091	449 aa		5.47	□□□□□ -1.53
snR46	snR46	HTA1	P04911	132 aa	Known RBP	5.46	□□□□□ -1.54
snR46	snR46	HTA2	P04912	132 aa		5.46	□□□□□ -1.54
snR46	snR46	ABP1	P15891	592 aa	Known RBP	5.45	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 67.8 ms