RNA–Protein interactions for RNA: snR41

snR41, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR41, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR41snR41 MTC1P47018 478 aaKnown RBP12.61□□□□□ -0.39
snR41snR41 DRS1P32892 752 aaKnown RBP11.83□□□□□ -0.52
snR41snR41 FAP1P53971 965 aa11.12□□□□□ -0.63
snR41snR41 PRI1P10363 409 aa10.58□□□□□ -0.72
snR41snR41 AAD16Q02895 342 aa10.49□□□□□ -0.73
snR41snR41 PRY3P47033 881 aa10.46□□□□□ -0.73
snR41snR41 ISW2Q08773 1120 aa10.41□□□□□ -0.74
snR41snR41 DIP2Q12220 943 aaPredicted RBP10.35□□□□□ -0.75
snR41snR41 RPG1P38249 964 aaKnown RBP10.28□□□□□ -0.76
snR41snR41 AVT3P36062 692 aa10.06□□□□□ -0.8
snR41snR41 RSE1Q04693 1361 aaKnown RBP10□□□□□ -0.81
snR41snR41 YCK3P39962 524 aa9.98□□□□□ -0.81
snR41snR41 TSR3Q12094 313 aaKnown RBP9.95□□□□□ -0.82
snR41snR41 HAA1Q12753 694 aaKnown RBP9.9□□□□□ -0.82
snR41snR41 BFR2Q06631 534 aaKnown RBP9.88□□□□□ -0.83
snR41snR41 RPL17AP05740 184 aaKnown RBP9.65□□□□□ -0.86
snR41snR41 RPL17BP46990 184 aaKnown RBP9.65□□□□□ -0.86
snR41snR41 REB1P21538 810 aa9.58□□□□□ -0.88
snR41snR41 MRPL32P25348 183 aa9.58□□□□□ -0.88
snR41snR41 SPT21P35209 758 aa9.3□□□□□ -0.92
snR41snR41 YGL015CP33199 130 aa9.19□□□□□ -0.94
snR41snR41 YKR023WP36119 530 aaKnown RBP9.16□□□□□ -0.94
snR41snR41 CDC27P38042 758 aa9.13□□□□□ -0.95
snR41snR41 RIM101P33400 625 aa9.02□□□□□ -0.97
snR41snR41 TFC8Q12308 588 aa8.97□□□□□ -0.97
snR41snR41 UBP10P53874 792 aaPredicted RBP8.91□□□□□ -0.98
snR41snR41 HOP09932 586 aa8.9□□□□□ -0.98
snR41snR41 DCD1P06773 312 aa8.84□□□□□ -0.99
snR41snR41 TFA1P36100 482 aa8.84□□□□□ -0.99
snR41snR41 MAP2P38174 421 aaKnown RBP8.82□□□□□ -1
snR41snR41 OXP1P28273 1286 aa8.69□□□□□ -1.02
snR41snR41 BCH2P36122 765 aa8.66□□□□□ -1.02
snR41snR41 SCY1P53009 804 aa8.65□□□□□ -1.02
snR41snR41 SLX5P32828 619 aaKnown RBP8.56□□□□□ -1.04
snR41snR41 TIF4632P39936 914 aaKnown RBP8.51□□□□□ -1.05
snR41snR41 TGL3P40308 642 aa8.51□□□□□ -1.05
snR41snR41 YIL055CP40523 627 aaKnown RBP8.51□□□□□ -1.05
snR41snR41 PTP3P40048 928 aa8.47□□□□□ -1.05
snR41snR41 EPS1P40557 701 aa8.45□□□□□ -1.06
snR41snR41 BDF1P35817 686 aa8.43□□□□□ -1.06
snR41snR41 RSM7P47150 247 aa8.43□□□□□ -1.06
snR41snR41 BUD31P25337 157 aaPredicted RBP8.39□□□□□ -1.07
snR41snR41 YAH1Q12184 172 aaKnown RBP8.36□□□□□ -1.07
snR41snR41 AI2P03876 854 aa8.33□□□□□ -1.08
snR41snR41 BBC1P47068 1157 aa8.32□□□□□ -1.08
snR41snR41 YLR271WQ06152 274 aa8.3□□□□□ -1.08
snR41snR41 SSP1P38871 571 aa8.23□□□□□ -1.09
snR41snR41 NSR1P27476 414 aaKnown RBP RIP-Chip data8.22□□□□□ -1.09not detected
snR41snR41 MST1P07236 462 aa8.21□□□□□ -1.1
snR41snR41 PSD2P53037 1138 aaKnown RBP8.19□□□□□ -1.1
snR41snR41 UBP9P39967 754 aa8.18□□□□□ -1.1
snR41snR41 ARP8Q12386 881 aaKnown RBP RIP-Chip data8.15□□□□□ -1.1not detected
snR41snR41 YOR238WQ08634 303 aa8.12□□□□□ -1.11
snR41snR41 YAP5P40574 245 aa8.08□□□□□ -1.12
snR41snR41 MGA2P40578 1113 aa8.03□□□□□ -1.12
snR41snR41 MRM1P25270 412 aa8.01□□□□□ -1.13
snR41snR41 CST9Q06032 482 aa7.99□□□□□ -1.13
snR41snR41 SIS1P25294 352 aaKnown RBP7.94□□□□□ -1.14
snR41snR41 YBL029C-AQ3E756 94 aa7.94□□□□□ -1.14
snR41snR41 VNX1P42839 908 aa7.92□□□□□ -1.14
snR41snR41 RTG3P38165 486 aa7.89□□□□□ -1.15
snR41snR41 VPS29P38759 282 aa7.89□□□□□ -1.15
snR41snR41 YMR1P47147 688 aaKnown RBP RIP-Chip data7.86□□□□□ -1.15not detected
snR41snR41 GTT3P39996 337 aa7.85□□□□□ -1.15
snR41snR41 WSC3Q12215 556 aa7.83□□□□□ -1.16
snR41snR41 SPP1Q03012 353 aa7.81□□□□□ -1.16
snR41snR41 PIB1Q06651 286 aa7.81□□□□□ -1.16
snR41snR41 DBP1P24784 617 aaKnown RBP7.8□□□□□ -1.16
snR41snR41 TIF11P38912 153 aaKnown RBP7.8□□□□□ -1.16
snR41snR41 RCR1P38212 213 aa7.78□□□□□ -1.16
snR41snR41 STS1P38637 319 aa7.78□□□□□ -1.16
snR41snR41 MSB4Q12317 492 aa7.75□□□□□ -1.17
snR41snR41 YFR006WP43590 535 aa7.74□□□□□ -1.17
snR41snR41 SAM3Q08986 587 aa7.73□□□□□ -1.17
snR41snR41 VMA1P17255 1071 aaKnown RBP7.72□□□□□ -1.17
snR41snR41 IOC2Q12072 812 aa7.71□□□□□ -1.18
snR41snR41 YOL036WQ08206 761 aa7.7□□□□□ -1.18
snR41snR41 EAP1P36041 632 aaKnown RBP7.69□□□□□ -1.18
snR41snR41 ULI1P43604 169 aa7.69□□□□□ -1.18
snR41snR41 FKH1P40466 484 aa7.67□□□□□ -1.18
snR41snR41 AIR2Q12476 344 aaKnown RBP7.66□□□□□ -1.18
snR41snR41 SET4P42948 560 aa7.64□□□□□ -1.19
snR41snR41 LDB19Q12502 818 aa7.64□□□□□ -1.19
snR41snR41 RAM2P29703 316 aa7.63□□□□□ -1.19
snR41snR41 TRP5P00931 707 aaKnown RBP7.61□□□□□ -1.19
snR41snR41 MAK11P20484 414 aaKnown RBP7.6□□□□□ -1.19
snR41snR41 ABP1P15891 592 aaKnown RBP7.59□□□□□ -1.19
snR41snR41 GYP5Q12344 894 aa7.56□□□□□ -1.2
snR41snR41 RTG1P32607 177 aa7.54□□□□□ -1.2
snR41snR41 YNL035CP53962 389 aaKnown RBP7.54□□□□□ -1.2
snR41snR41 SEC61P32915 480 aa7.53□□□□□ -1.2
snR41snR41 YJL171CP46992 396 aa7.52□□□□□ -1.21
snR41snR41 JIP4Q03361 876 aa7.51□□□□□ -1.21
snR41snR41 HTA1P04911 132 aaKnown RBP7.5□□□□□ -1.21
snR41snR41 HTA2P04912 132 aa7.5□□□□□ -1.21
snR41snR41 EDS1P38073 919 aa7.5□□□□□ -1.21
snR41snR41 NCR1Q12200 1170 aa7.5□□□□□ -1.21
snR41snR41 DAN4P47179 1161 aa7.49□□□□□ -1.21
snR41snR41 COQ8P27697 501 aa7.48□□□□□ -1.21
snR41snR41 MIF2P35201 549 aa7.48□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms