RNA–Protein interactions for RNA: snR189

snR189, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR189, Length 189 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR189snR189 MTC1P47018 478 aaKnown RBP18.8■□□□□ 0.6
snR189snR189 DRS1P32892 752 aaKnown RBP17.77■□□□□ 0.44
snR189snR189 FAP1P53971 965 aa16.82■□□□□ 0.28
snR189snR189 PRY3P47033 881 aa15.79■□□□□ 0.12
snR189snR189 PRI1P10363 409 aa15.76■□□□□ 0.11
snR189snR189 AAD16Q02895 342 aa15.66■□□□□ 0.1
snR189snR189 ISW2Q08773 1120 aa15.55■□□□□ 0.08
snR189snR189 DIP2Q12220 943 aaPredicted RBP15.51■□□□□ 0.07
snR189snR189 RPG1P38249 964 aaKnown RBP15.42■□□□□ 0.06
snR189snR189 TSR3Q12094 313 aaKnown RBP14.97□□□□□ -0.01
snR189snR189 AVT3P36062 692 aa14.96□□□□□ -0.01
snR189snR189 RSE1Q04693 1361 aaKnown RBP14.94□□□□□ -0.02
snR189snR189 YCK3P39962 524 aa14.88□□□□□ -0.03
snR189snR189 BFR2Q06631 534 aaKnown RBP14.84□□□□□ -0.03
snR189snR189 HAA1Q12753 694 aaKnown RBP14.76□□□□□ -0.05
snR189snR189 RPL17AP05740 184 aaKnown RBP14.48□□□□□ -0.09
snR189snR189 RPL17BP46990 184 aaKnown RBP14.48□□□□□ -0.09
snR189snR189 REB1P21538 810 aa14.4□□□□□ -0.1
snR189snR189 MRPL32P25348 183 aa14.35□□□□□ -0.11
snR189snR189 SPT21P35209 758 aa13.81□□□□□ -0.2
snR189snR189 YGL015CP33199 130 aa13.7□□□□□ -0.22
snR189snR189 CDC27P38042 758 aa13.67□□□□□ -0.22
snR189snR189 YKR023WP36119 530 aaKnown RBP13.66□□□□□ -0.22
snR189snR189 HOP09932 586 aa13.43□□□□□ -0.26
snR189snR189 DCD1P06773 312 aa13.38□□□□□ -0.27
snR189snR189 RIM101P33400 625 aa13.37□□□□□ -0.27
snR189snR189 TFC8Q12308 588 aa13.37□□□□□ -0.27
snR189snR189 MAP2P38174 421 aaKnown RBP13.22□□□□□ -0.29
snR189snR189 UBP10P53874 792 aaPredicted RBP13.18□□□□□ -0.3
snR189snR189 TFA1P36100 482 aa13.12□□□□□ -0.31
snR189snR189 SCY1P53009 804 aa13□□□□□ -0.33
snR189snR189 OXP1P28273 1286 aa12.96□□□□□ -0.33
snR189snR189 BCH2P36122 765 aa12.96□□□□□ -0.33
snR189snR189 YIL055CP40523 627 aaKnown RBP12.79□□□□□ -0.36
snR189snR189 SLX5P32828 619 aaKnown RBP12.78□□□□□ -0.36
snR189snR189 PTP3P40048 928 aa12.78□□□□□ -0.36
snR189snR189 TIF4632P39936 914 aaKnown RBP12.68□□□□□ -0.38
snR189snR189 YAH1Q12184 172 aaKnown RBP12.66□□□□□ -0.38
snR189snR189 EPS1P40557 701 aa12.64□□□□□ -0.39
snR189snR189 TGL3P40308 642 aa12.6□□□□□ -0.39
snR189snR189 BDF1P35817 686 aa12.58□□□□□ -0.4
snR189snR189 RSM7P47150 247 aa12.58□□□□□ -0.4
snR189snR189 AI2P03876 854 aa12.46□□□□□ -0.41
snR189snR189 BUD31P25337 157 aaPredicted RBP12.45□□□□□ -0.42
snR189snR189 BBC1P47068 1157 aa12.44□□□□□ -0.42
snR189snR189 YLR271WQ06152 274 aa12.4□□□□□ -0.42
snR189snR189 SSP1P38871 571 aa12.27□□□□□ -0.45
snR189snR189 UBP9P39967 754 aa12.18□□□□□ -0.46
snR189snR189 ARP8Q12386 881 aaKnown RBP RIP-Chip data12.17□□□□□ -0.46not detected
snR189snR189 PSD2P53037 1138 aaKnown RBP12.16□□□□□ -0.46
snR189snR189 YOR238WQ08634 303 aa12.09□□□□□ -0.47
snR189snR189 MST1P07236 462 aa12.06□□□□□ -0.48
snR189snR189 MRM1P25270 412 aa12.03□□□□□ -0.48
snR189snR189 NSR1P27476 414 aaKnown RBP RIP-Chip data12.03□□□□□ -0.48not detected
snR189snR189 YAP5P40574 245 aa12.03□□□□□ -0.48
snR189snR189 CST9Q06032 482 aa11.99□□□□□ -0.49
snR189snR189 MGA2P40578 1113 aa11.95□□□□□ -0.5
snR189snR189 SIS1P25294 352 aaKnown RBP11.93□□□□□ -0.5
snR189snR189 YBL029C-AQ3E756 94 aa11.92□□□□□ -0.5
snR189snR189 PIB1Q06651 286 aa11.85□□□□□ -0.51
snR189snR189 WSC3Q12215 556 aa11.81□□□□□ -0.52
snR189snR189 GTT3P39996 337 aa11.78□□□□□ -0.52
snR189snR189 VNX1P42839 908 aa11.78□□□□□ -0.52
snR189snR189 RTG3P38165 486 aa11.76□□□□□ -0.53
snR189snR189 VPS29P38759 282 aa11.73□□□□□ -0.53
snR189snR189 SPP1Q03012 353 aa11.7□□□□□ -0.54
snR189snR189 RCR1P38212 213 aa11.69□□□□□ -0.54
snR189snR189 YMR1P47147 688 aaKnown RBP RIP-Chip data11.69□□□□□ -0.54not detected
snR189snR189 YFR006WP43590 535 aa11.67□□□□□ -0.54
snR189snR189 DBP1P24784 617 aaKnown RBP11.66□□□□□ -0.54
snR189snR189 STS1P38637 319 aa11.61□□□□□ -0.55
snR189snR189 TIF11P38912 153 aaKnown RBP11.58□□□□□ -0.56
snR189snR189 VMA1P17255 1071 aaKnown RBP11.49□□□□□ -0.57
snR189snR189 SET4P42948 560 aa11.48□□□□□ -0.57
snR189snR189 ULI1P43604 169 aa11.48□□□□□ -0.57
snR189snR189 YOL036WQ08206 761 aa11.46□□□□□ -0.57
snR189snR189 MSB4Q12317 492 aa11.44□□□□□ -0.58
snR189snR189 LDB19Q12502 818 aa11.42□□□□□ -0.58
snR189snR189 IOC2Q12072 812 aa11.41□□□□□ -0.58
snR189snR189 SAM3Q08986 587 aa11.38□□□□□ -0.59
snR189snR189 RAM2P29703 316 aa11.37□□□□□ -0.59
snR189snR189 EAP1P36041 632 aaKnown RBP11.37□□□□□ -0.59
snR189snR189 FKH1P40466 484 aa11.36□□□□□ -0.59
snR189snR189 AIR2Q12476 344 aaKnown RBP11.36□□□□□ -0.59
snR189snR189 TRP5P00931 707 aaKnown RBP11.34□□□□□ -0.59
snR189snR189 GYP5Q12344 894 aa11.29□□□□□ -0.6
snR189snR189 YJL171CP46992 396 aa11.27□□□□□ -0.61
snR189snR189 MAK11P20484 414 aaKnown RBP11.26□□□□□ -0.61
snR189snR189 MIF2P35201 549 aa11.25□□□□□ -0.61
snR189snR189 RTG1P32607 177 aa11.24□□□□□ -0.61
snR189snR189 DCW1P36091 449 aa11.22□□□□□ -0.61
snR189snR189 YNL035CP53962 389 aaKnown RBP11.19□□□□□ -0.62
snR189snR189 EDS1P38073 919 aa11.17□□□□□ -0.62
snR189snR189 NCR1Q12200 1170 aa11.17□□□□□ -0.62
snR189snR189 HTA1P04911 132 aaKnown RBP11.16□□□□□ -0.62
snR189snR189 HTA2P04912 132 aa11.16□□□□□ -0.62
snR189snR189 ABP1P15891 592 aaKnown RBP11.16□□□□□ -0.62
snR189snR189 COQ8P27697 501 aa11.14□□□□□ -0.63
snR189snR189 GRE2Q12068 342 aaKnown RBP11.14□□□□□ -0.63
snR189snR189 BMT6Q12291 365 aa11.13□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms