RNA–Protein interactions for RNA: YPR129W

SCD6, Transcript of Repressor of translation initiation, yeastyeast

Gene SCD6, Length 1,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD6YPR129W MTC1P47018 478 aaKnown RBP16.41■□□□□ 0.22
SCD6YPR129W FAP1P53971 965 aa15.26■□□□□ 0.03
SCD6YPR129W DRS1P32892 752 aaKnown RBP14.84□□□□□ -0.03
SCD6YPR129W PRY3P47033 881 aa14.36□□□□□ -0.11
SCD6YPR129W PRI1P10363 409 aa14.09□□□□□ -0.15
SCD6YPR129W AAD16Q02895 342 aa14.07□□□□□ -0.16
SCD6YPR129W ISW2Q08773 1120 aa13.72□□□□□ -0.21
SCD6YPR129W RPG1P38249 964 aaKnown RBP13.56□□□□□ -0.24
SCD6YPR129W YCK3P39962 524 aa13.53□□□□□ -0.24
SCD6YPR129W HAA1Q12753 694 aaKnown RBP13.49□□□□□ -0.25
SCD6YPR129W TSR3Q12094 313 aaKnown RBP13.27□□□□□ -0.29
SCD6YPR129W DIP2Q12220 943 aaPredicted RBP13.19□□□□□ -0.3
SCD6YPR129W RSE1Q04693 1361 aaKnown RBP12.9□□□□□ -0.34
SCD6YPR129W MRPL32P25348 183 aa12.78□□□□□ -0.36
SCD6YPR129W AVT3P36062 692 aa12.6□□□□□ -0.39
SCD6YPR129W RPL17AP05740 184 aaKnown RBP12.5□□□□□ -0.41
SCD6YPR129W REB1P21538 810 aa12.5□□□□□ -0.41
SCD6YPR129W RPL17BP46990 184 aaKnown RBP12.5□□□□□ -0.41
SCD6YPR129W YGL015CP33199 130 aa12.4□□□□□ -0.42
SCD6YPR129W BFR2Q06631 534 aaKnown RBP12.14□□□□□ -0.47
SCD6YPR129W CDC27P38042 758 aa12.04□□□□□ -0.48
SCD6YPR129W SPT21P35209 758 aa11.94□□□□□ -0.5
SCD6YPR129W YKR023WP36119 530 aaKnown RBP11.9□□□□□ -0.5
SCD6YPR129W UBP10P53874 792 aaPredicted RBP11.8□□□□□ -0.52
SCD6YPR129W MAP2P38174 421 aaKnown RBP11.72□□□□□ -0.53
SCD6YPR129W TFC8Q12308 588 aa11.67□□□□□ -0.54
SCD6YPR129W HOP09932 586 aa11.64□□□□□ -0.55
SCD6YPR129W DCD1P06773 312 aa11.59□□□□□ -0.55
SCD6YPR129W BUD31P25337 157 aaPredicted RBP11.57□□□□□ -0.56
SCD6YPR129W RIM101P33400 625 aa11.42□□□□□ -0.58
SCD6YPR129W SCY1P53009 804 aa11.41□□□□□ -0.58
SCD6YPR129W TIF4632P39936 914 aaKnown RBP11.33□□□□□ -0.6
SCD6YPR129W SLX5P32828 619 aaKnown RBP11.31□□□□□ -0.6
SCD6YPR129W TGL3P40308 642 aa11.29□□□□□ -0.6
SCD6YPR129W BCH2P36122 765 aa11.26□□□□□ -0.61
SCD6YPR129W UBP9P39967 754 aa11.09□□□□□ -0.63
SCD6YPR129W OXP1P28273 1286 aa11.01□□□□□ -0.65
SCD6YPR129W SIS1P25294 352 aaKnown RBP10.96□□□□□ -0.65
SCD6YPR129W EPS1P40557 701 aa10.95□□□□□ -0.66
SCD6YPR129W BDF1P35817 686 aa10.91□□□□□ -0.66
SCD6YPR129W PTP3P40048 928 aa10.87□□□□□ -0.67
SCD6YPR129W YIL055CP40523 627 aaKnown RBP10.87□□□□□ -0.67
SCD6YPR129W MST1P07236 462 aa10.76□□□□□ -0.69
SCD6YPR129W BBC1P47068 1157 aa10.71□□□□□ -0.69
SCD6YPR129W RSM7P47150 247 aa10.71□□□□□ -0.69
SCD6YPR129W YOR238WQ08634 303 aa10.7□□□□□ -0.7
SCD6YPR129W NSR1P27476 414 aaKnown RBP RIP-Chip data10.68□□□□□ -0.7not detected
SCD6YPR129W AI2P03876 854 aa10.64□□□□□ -0.71
SCD6YPR129W YBL029C-AQ3E756 94 aa10.62□□□□□ -0.71
SCD6YPR129W YAH1Q12184 172 aaKnown RBP10.6□□□□□ -0.71
SCD6YPR129W YAP5P40574 245 aa10.56□□□□□ -0.72
SCD6YPR129W TFA1P36100 482 aa10.54□□□□□ -0.72
SCD6YPR129W VNX1P42839 908 aa10.51□□□□□ -0.73
SCD6YPR129W YLR271WQ06152 274 aa10.43□□□□□ -0.74
SCD6YPR129W SPP1Q03012 353 aa10.42□□□□□ -0.74
SCD6YPR129W WSC3Q12215 556 aa10.39□□□□□ -0.75
SCD6YPR129W PSD2P53037 1138 aaKnown RBP10.35□□□□□ -0.75
SCD6YPR129W GTT3P39996 337 aa10.34□□□□□ -0.75
SCD6YPR129W TIF11P38912 153 aaKnown RBP10.3□□□□□ -0.76
SCD6YPR129W MRM1P25270 412 aa10.22□□□□□ -0.77
SCD6YPR129W FKH1P40466 484 aa10.22□□□□□ -0.77
SCD6YPR129W AIR2Q12476 344 aaKnown RBP10.22□□□□□ -0.77
SCD6YPR129W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.21□□□□□ -0.77not detected
SCD6YPR129W SSP1P38871 571 aa10.19□□□□□ -0.78
SCD6YPR129W PIB1Q06651 286 aa10.19□□□□□ -0.78
SCD6YPR129W YJL171CP46992 396 aa10.17□□□□□ -0.78
SCD6YPR129W ULI1P43604 169 aa10.15□□□□□ -0.78
SCD6YPR129W LDB19Q12502 818 aa10.13□□□□□ -0.79
SCD6YPR129W IOC2Q12072 812 aa10.12□□□□□ -0.79
SCD6YPR129W MSB4Q12317 492 aa10.1□□□□□ -0.79
SCD6YPR129W EAP1P36041 632 aaKnown RBP10.05□□□□□ -0.8
SCD6YPR129W YMR1P47147 688 aaKnown RBP RIP-Chip data10.05□□□□□ -0.8not detected
SCD6YPR129W MGA2P40578 1113 aa10.02□□□□□ -0.81
SCD6YPR129W CST9Q06032 482 aa10.02□□□□□ -0.81
SCD6YPR129W VPS29P38759 282 aa10.01□□□□□ -0.81
SCD6YPR129W BMT6Q12291 365 aa10.01□□□□□ -0.81
SCD6YPR129W RTG3P38165 486 aa10□□□□□ -0.81
SCD6YPR129W YOL036WQ08206 761 aa10□□□□□ -0.81
SCD6YPR129W DBP1P24784 617 aaKnown RBP9.99□□□□□ -0.81
SCD6YPR129W SET4P42948 560 aa9.97□□□□□ -0.81
SCD6YPR129W TRP5P00931 707 aaKnown RBP9.93□□□□□ -0.82
SCD6YPR129W VMA1P17255 1071 aaKnown RBP9.93□□□□□ -0.82
SCD6YPR129W STS1P38637 319 aa9.93□□□□□ -0.82
SCD6YPR129W YFR006WP43590 535 aa9.93□□□□□ -0.82
SCD6YPR129W RTG1P32607 177 aa9.92□□□□□ -0.82
SCD6YPR129W SAM3Q08986 587 aa9.9□□□□□ -0.82
SCD6YPR129W YNL035CP53962 389 aaKnown RBP9.87□□□□□ -0.83
SCD6YPR129W NCR1Q12200 1170 aa9.87□□□□□ -0.83
SCD6YPR129W SEC61P32915 480 aa9.84□□□□□ -0.83
SCD6YPR129W RCR1P38212 213 aa9.83□□□□□ -0.84
SCD6YPR129W ABP1P15891 592 aaKnown RBP9.77□□□□□ -0.85
SCD6YPR129W TFG1P41895 735 aaPredicted RBP9.74□□□□□ -0.85
SCD6YPR129W JIP4Q03361 876 aa9.73□□□□□ -0.85
SCD6YPR129W GYP5Q12344 894 aa9.73□□□□□ -0.85
SCD6YPR129W DAN4P47179 1161 aa9.71□□□□□ -0.86
SCD6YPR129W HTA1P04911 132 aaKnown RBP9.67□□□□□ -0.86
SCD6YPR129W HTA2P04912 132 aa9.67□□□□□ -0.86
SCD6YPR129W DCW1P36091 449 aa9.64□□□□□ -0.87
SCD6YPR129W SAP30P38429 201 aa9.64□□□□□ -0.87
SCD6YPR129W YDL129WQ07555 291 aa9.63□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms