RNA–Protein interactions for RNA: YPR112C

MRD1, Transcript of Essential conserved small ribosomal subunit (40s) synthesis factor, yeastyeast

Gene MRD1, Length 2,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRD1YPR112C DRS1P32892 752 aaKnown RBP5.11□□□□□ -1.59
MRD1YPR112C MTC1P47018 478 aaKnown RBP4.97□□□□□ -1.61
MRD1YPR112C RQC2Q12532 1038 aaKnown RBP4.8□□□□□ -1.64
MRD1YPR112C TFA1P36100 482 aa4.77□□□□□ -1.65
MRD1YPR112C FAP1P53971 965 aa4.76□□□□□ -1.65
MRD1YPR112C BFR2Q06631 534 aaKnown RBP4.69□□□□□ -1.66
MRD1YPR112C AVT3P36062 692 aa4.49□□□□□ -1.69
MRD1YPR112C PRY3P47033 881 aa4.43□□□□□ -1.7
MRD1YPR112C TAF7Q05021 590 aa4.39□□□□□ -1.71
MRD1YPR112C YCK3P39962 524 aa4.35□□□□□ -1.71
MRD1YPR112C PRI1P10363 409 aa4.31□□□□□ -1.72
MRD1YPR112C DIP2Q12220 943 aaPredicted RBP4.25□□□□□ -1.73
MRD1YPR112C AAD16Q02895 342 aa4.22□□□□□ -1.73
MRD1YPR112C SGS1P35187 1447 aa4.19□□□□□ -1.74
MRD1YPR112C INO80P53115 1489 aa4.11□□□□□ -1.75
MRD1YPR112C DMA1P38823 416 aa4.1□□□□□ -1.75
MRD1YPR112C HAA1Q12753 694 aaKnown RBP4.09□□□□□ -1.75
MRD1YPR112C RPG1P38249 964 aaKnown RBP4.08□□□□□ -1.76
MRD1YPR112C SPA2P23201 1466 aaKnown RBP4.07□□□□□ -1.76
MRD1YPR112C TY1B-DR4Q07793 1604 aa4.06□□□□□ -1.76
MRD1YPR112C TCB3Q03640 1545 aaKnown RBP4.05□□□□□ -1.76
MRD1YPR112C ISW2Q08773 1120 aa4.04□□□□□ -1.76
MRD1YPR112C SSN2P38931 1420 aa4.03□□□□□ -1.76
MRD1YPR112C TSR3Q12094 313 aaKnown RBP4.03□□□□□ -1.76
MRD1YPR112C LEO1P38439 464 aa4.02□□□□□ -1.77
MRD1YPR112C MON2P48563 1636 aaPredicted RBP3.98□□□□□ -1.77
MRD1YPR112C HSL1P34244 1518 aa3.96□□□□□ -1.78
MRD1YPR112C SPT6P23615 1451 aaKnown RBP3.92□□□□□ -1.78
MRD1YPR112C SWR1Q05471 1514 aa3.91□□□□□ -1.78
MRD1YPR112C ABP1P15891 592 aaKnown RBP3.89□□□□□ -1.79
MRD1YPR112C HIR3P47171 1648 aa3.89□□□□□ -1.79
MRD1YPR112C XRN1P22147 1528 aaKnown RBP3.85□□□□□ -1.79
MRD1YPR112C SAS10Q12136 610 aaPredicted RBP3.84□□□□□ -1.79
MRD1YPR112C PTP3P40048 928 aa3.84□□□□□ -1.8
MRD1YPR112C THO2P53552 1597 aaKnown RBP3.83□□□□□ -1.8
MRD1YPR112C REV3P14284 1504 aa3.82□□□□□ -1.8
MRD1YPR112C RSE1Q04693 1361 aaKnown RBP3.81□□□□□ -1.8
MRD1YPR112C SIN3P22579 1536 aa3.81□□□□□ -1.8
MRD1YPR112C SPT21P35209 758 aa3.8□□□□□ -1.8
MRD1YPR112C SSK2P53599 1579 aa3.8□□□□□ -1.8
MRD1YPR112C ESP1Q03018 1630 aa3.79□□□□□ -1.8
MRD1YPR112C RIM101P33400 625 aa3.79□□□□□ -1.8
MRD1YPR112C AIM44Q99299 758 aa3.78□□□□□ -1.8
MRD1YPR112C LEU3P08638 886 aa3.77□□□□□ -1.81
MRD1YPR112C KOG1P38873 1557 aa3.76□□□□□ -1.81
MRD1YPR112C MRPL32P25348 183 aa3.76□□□□□ -1.81
MRD1YPR112C MYO2P19524 1574 aaKnown RBP3.75□□□□□ -1.81
MRD1YPR112C DNA2P38859 1522 aa3.75□□□□□ -1.81
MRD1YPR112C ATG2P53855 1592 aa3.74□□□□□ -1.81
MRD1YPR112C TAF2P23255 1407 aa3.73□□□□□ -1.81
MRD1YPR112C OXP1P28273 1286 aa3.73□□□□□ -1.81
MRD1YPR112C RPL17AP05740 184 aaKnown RBP3.72□□□□□ -1.81
MRD1YPR112C CDC27P38042 758 aa3.72□□□□□ -1.81
MRD1YPR112C RPL17BP46990 184 aaKnown RBP3.72□□□□□ -1.81
MRD1YPR112C SKI3P17883 1432 aaKnown RBP3.71□□□□□ -1.81
MRD1YPR112C BUD4P47136 1447 aa3.7□□□□□ -1.82
MRD1YPR112C YKR023WP36119 530 aaKnown RBP3.68□□□□□ -1.82
MRD1YPR112C SSP1P38871 571 aa3.68□□□□□ -1.82
MRD1YPR112C DMA2P53924 522 aa3.68□□□□□ -1.82
MRD1YPR112C PEP1P32319 1579 aa3.68□□□□□ -1.82
MRD1YPR112C YGL015CP33199 130 aa3.67□□□□□ -1.82
MRD1YPR112C RPN1P38764 993 aaKnown RBP3.67□□□□□ -1.82
MRD1YPR112C TY2B-LR1P0C2J3 1770 aa3.67□□□□□ -1.82
MRD1YPR112C TY2B-FP0CX63 1770 aa3.67□□□□□ -1.82
MRD1YPR112C TY2B-GR2P0CX64 1770 aa3.67□□□□□ -1.82
MRD1YPR112C TY2B-CP25384 1770 aa3.67□□□□□ -1.82
MRD1YPR112C TY2B-DR2Q03494 1770 aa3.67□□□□□ -1.82
MRD1YPR112C TY1B-DR1Q03855 1755 aa3.67□□□□□ -1.82
MRD1YPR112C TY2B-DR3Q07791 1770 aaKnown RBP3.67□□□□□ -1.82
MRD1YPR112C TY2B-OR1Q12113 1770 aa3.67□□□□□ -1.82
MRD1YPR112C TY2B-DR1Q12472 1770 aa3.67□□□□□ -1.82
MRD1YPR112C TY2B-OR2Q12501 1770 aa3.67□□□□□ -1.82
MRD1YPR112C YLR271WQ06152 274 aa3.67□□□□□ -1.82
MRD1YPR112C TY1B-DR3Q99231 1755 aa3.66□□□□□ -1.82
MRD1YPR112C ECM5Q03214 1411 aa3.66□□□□□ -1.82
MRD1YPR112C CHD1P32657 1468 aa3.66□□□□□ -1.82
MRD1YPR112C IFH1P39520 1085 aa3.66□□□□□ -1.82
MRD1YPR112C YPK9Q12697 1472 aa3.66□□□□□ -1.82
MRD1YPR112C REB1P21538 810 aa3.66□□□□□ -1.82
MRD1YPR112C RLF2Q12495 606 aa3.66□□□□□ -1.82
MRD1YPR112C POL1P13382 1468 aa3.65□□□□□ -1.82
MRD1YPR112C MMS22Q06164 1454 aa3.65□□□□□ -1.82
MRD1YPR112C HGH1P48362 394 aaKnown RBP3.65□□□□□ -1.82
MRD1YPR112C MDS3P53094 1487 aa3.65□□□□□ -1.83
MRD1YPR112C STU1P38198 1513 aa3.65□□□□□ -1.83
MRD1YPR112C RKR1Q04781 1562 aa3.65□□□□□ -1.83
MRD1YPR112C MIF2P35201 549 aa3.65□□□□□ -1.83
MRD1YPR112C TY2B-BQ12491 1770 aa3.65□□□□□ -1.83
MRD1YPR112C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
MRD1YPR112C BPT1P14772 1559 aa3.64□□□□□ -1.83
MRD1YPR112C SCC2Q04002 1493 aa3.63□□□□□ -1.83
MRD1YPR112C TY1B-HO13535 1793 aa3.62□□□□□ -1.83
MRD1YPR112C TY1B-DR5P0C2I2 1755 aa3.62□□□□□ -1.83
MRD1YPR112C TY1B-DR6P0C2I3 1755 aa3.62□□□□□ -1.83
MRD1YPR112C TY1B-LR2P0C2I5 1755 aa3.62□□□□□ -1.83
MRD1YPR112C TY1B-LR3P0C2I6 1755 aaKnown RBP3.62□□□□□ -1.83
MRD1YPR112C TY1B-PR1P0C2I9 1755 aaKnown RBP3.62□□□□□ -1.83
MRD1YPR112C TY1B-PR2P0C2J0 1756 aa3.62□□□□□ -1.83
MRD1YPR112C TY1B-PR3P0C2J1 1755 aaKnown RBP3.62□□□□□ -1.83
MRD1YPR112C TY1B-JR1P47098 1755 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms