RNA–Protein interactions for RNA: YPR046W

MCM16, Transcript of Component of the Ctf19 complex and the COMA subcomplex, yeastyeast

Gene MCM16, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCM16YPR046W MTC1P47018 478 aaKnown RBP12.68□□□□□ -0.38
MCM16YPR046W FAP1P53971 965 aa11.73□□□□□ -0.53
MCM16YPR046W DRS1P32892 752 aaKnown RBP11.64□□□□□ -0.55
MCM16YPR046W PRY3P47033 881 aa11□□□□□ -0.65
MCM16YPR046W PRI1P10363 409 aa10.81□□□□□ -0.68
MCM16YPR046W AAD16Q02895 342 aa10.8□□□□□ -0.68
MCM16YPR046W ISW2Q08773 1120 aa10.61□□□□□ -0.71
MCM16YPR046W RPG1P38249 964 aaKnown RBP10.47□□□□□ -0.73
MCM16YPR046W HAA1Q12753 694 aaKnown RBP10.33□□□□□ -0.76
MCM16YPR046W DIP2Q12220 943 aaPredicted RBP10.28□□□□□ -0.76
MCM16YPR046W YCK3P39962 524 aa10.26□□□□□ -0.77
MCM16YPR046W TSR3Q12094 313 aaKnown RBP10.21□□□□□ -0.77
MCM16YPR046W RSE1Q04693 1361 aaKnown RBP10.01□□□□□ -0.81
MCM16YPR046W MRPL32P25348 183 aa9.87□□□□□ -0.83
MCM16YPR046W AVT3P36062 692 aa9.8□□□□□ -0.84
MCM16YPR046W REB1P21538 810 aa9.72□□□□□ -0.85
MCM16YPR046W RPL17AP05740 184 aaKnown RBP9.7□□□□□ -0.86
MCM16YPR046W RPL17BP46990 184 aaKnown RBP9.7□□□□□ -0.86
MCM16YPR046W BFR2Q06631 534 aaKnown RBP9.57□□□□□ -0.88
MCM16YPR046W YGL015CP33199 130 aa9.52□□□□□ -0.89
MCM16YPR046W CDC27P38042 758 aa9.24□□□□□ -0.93
MCM16YPR046W SPT21P35209 758 aa9.21□□□□□ -0.94
MCM16YPR046W YKR023WP36119 530 aaKnown RBP9.17□□□□□ -0.94
MCM16YPR046W UBP10P53874 792 aaPredicted RBP9.07□□□□□ -0.96
MCM16YPR046W HOP09932 586 aa9.01□□□□□ -0.97
MCM16YPR046W MAP2P38174 421 aaKnown RBP9.01□□□□□ -0.97
MCM16YPR046W TFC8Q12308 588 aa9□□□□□ -0.97
MCM16YPR046W DCD1P06773 312 aa8.95□□□□□ -0.98
MCM16YPR046W RIM101P33400 625 aa8.86□□□□□ -0.99
MCM16YPR046W SCY1P53009 804 aa8.81□□□□□ -1
MCM16YPR046W BUD31P25337 157 aaPredicted RBP8.79□□□□□ -1
MCM16YPR046W TFA1P36100 482 aa8.77□□□□□ -1.01
MCM16YPR046W TIF4632P39936 914 aaKnown RBP8.75□□□□□ -1.01
MCM16YPR046W SLX5P32828 619 aaKnown RBP8.73□□□□□ -1.01
MCM16YPR046W BCH2P36122 765 aa8.7□□□□□ -1.02
MCM16YPR046W TGL3P40308 642 aa8.67□□□□□ -1.02
MCM16YPR046W OXP1P28273 1286 aa8.53□□□□□ -1.04
MCM16YPR046W UBP9P39967 754 aa8.53□□□□□ -1.04
MCM16YPR046W YIL055CP40523 627 aaKnown RBP8.52□□□□□ -1.05
MCM16YPR046W PTP3P40048 928 aa8.5□□□□□ -1.05
MCM16YPR046W EPS1P40557 701 aa8.48□□□□□ -1.05
MCM16YPR046W BDF1P35817 686 aa8.44□□□□□ -1.06
MCM16YPR046W SIS1P25294 352 aaKnown RBP8.4□□□□□ -1.06
MCM16YPR046W BBC1P47068 1157 aa8.35□□□□□ -1.07
MCM16YPR046W RSM7P47150 247 aa8.34□□□□□ -1.07
MCM16YPR046W YAH1Q12184 172 aaKnown RBP8.31□□□□□ -1.08
MCM16YPR046W AI2P03876 854 aa8.28□□□□□ -1.08
MCM16YPR046W YOR238WQ08634 303 aa8.26□□□□□ -1.09
MCM16YPR046W MST1P07236 462 aa8.24□□□□□ -1.09
MCM16YPR046W NSR1P27476 414 aaKnown RBP RIP-Chip data8.2□□□□□ -1.1not detected
MCM16YPR046W YAP5P40574 245 aa8.17□□□□□ -1.1
MCM16YPR046W YBL029C-AQ3E756 94 aa8.16□□□□□ -1.1
MCM16YPR046W YLR271WQ06152 274 aa8.12□□□□□ -1.11
MCM16YPR046W RQC2Q12532 1038 aaKnown RBP8.12□□□□□ -1.11
MCM16YPR046W VNX1P42839 908 aa8.07□□□□□ -1.12
MCM16YPR046W GTT3P39996 337 aa8.04□□□□□ -1.12
MCM16YPR046W SPP1Q03012 353 aa8.04□□□□□ -1.12
MCM16YPR046W WSC3Q12215 556 aa8.04□□□□□ -1.12
MCM16YPR046W PSD2P53037 1138 aaKnown RBP8.02□□□□□ -1.13
MCM16YPR046W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.02□□□□□ -1.13not detected
MCM16YPR046W SSP1P38871 571 aa8□□□□□ -1.13
MCM16YPR046W MRM1P25270 412 aa7.97□□□□□ -1.13
MCM16YPR046W TIF11P38912 153 aaKnown RBP7.93□□□□□ -1.14
MCM16YPR046W PIB1Q06651 286 aa7.92□□□□□ -1.14
MCM16YPR046W YJL171CP46992 396 aa7.86□□□□□ -1.15
MCM16YPR046W MGA2P40578 1113 aa7.84□□□□□ -1.15
MCM16YPR046W ULI1P43604 169 aa7.83□□□□□ -1.16
MCM16YPR046W FKH1P40466 484 aa7.82□□□□□ -1.16
MCM16YPR046W AIR2Q12476 344 aaKnown RBP7.82□□□□□ -1.16
MCM16YPR046W YMR1P47147 688 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
MCM16YPR046W CST9Q06032 482 aa7.81□□□□□ -1.16
MCM16YPR046W LDB19Q12502 818 aa7.81□□□□□ -1.16
MCM16YPR046W RTG3P38165 486 aa7.8□□□□□ -1.16
MCM16YPR046W MSB4Q12317 492 aa7.8□□□□□ -1.16
MCM16YPR046W EAP1P36041 632 aaKnown RBP7.78□□□□□ -1.16
MCM16YPR046W DBP1P24784 617 aaKnown RBP7.77□□□□□ -1.17
MCM16YPR046W IOC2Q12072 812 aa7.77□□□□□ -1.17
MCM16YPR046W VPS29P38759 282 aa7.76□□□□□ -1.17
MCM16YPR046W SET4P42948 560 aa7.73□□□□□ -1.17
MCM16YPR046W YFR006WP43590 535 aa7.73□□□□□ -1.17
MCM16YPR046W YOL036WQ08206 761 aa7.73□□□□□ -1.17
MCM16YPR046W BMT6Q12291 365 aa7.7□□□□□ -1.18
MCM16YPR046W VMA1P17255 1071 aaKnown RBP7.69□□□□□ -1.18
MCM16YPR046W STS1P38637 319 aa7.69□□□□□ -1.18
MCM16YPR046W TRP5P00931 707 aaKnown RBP7.67□□□□□ -1.18
MCM16YPR046W RTG1P32607 177 aa7.66□□□□□ -1.18
MCM16YPR046W SAM3Q08986 587 aa7.64□□□□□ -1.19
MCM16YPR046W RCR1P38212 213 aa7.63□□□□□ -1.19
MCM16YPR046W NCR1Q12200 1170 aa7.63□□□□□ -1.19
MCM16YPR046W YNL035CP53962 389 aaKnown RBP7.62□□□□□ -1.19
MCM16YPR046W SEC61P32915 480 aa7.6□□□□□ -1.19
MCM16YPR046W TFG1P41895 735 aaPredicted RBP7.58□□□□□ -1.2
MCM16YPR046W ABP1P15891 592 aaKnown RBP7.57□□□□□ -1.2
MCM16YPR046W GYP5Q12344 894 aa7.56□□□□□ -1.2
MCM16YPR046W JIP4Q03361 876 aa7.53□□□□□ -1.2
MCM16YPR046W HTA1P04911 132 aaKnown RBP7.52□□□□□ -1.21
MCM16YPR046W HTA2P04912 132 aa7.52□□□□□ -1.21
MCM16YPR046W DCW1P36091 449 aa7.5□□□□□ -1.21
MCM16YPR046W DAN4P47179 1161 aa7.47□□□□□ -1.21
MCM16YPR046W PTC4P38089 393 aa7.45□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms