RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeastyeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPR039WYPR039W MTC1P47018 478 aaKnown RBP11.52□□□□□ -0.57
YPR039WYPR039W DRS1P32892 752 aaKnown RBP10.78□□□□□ -0.68
YPR039WYPR039W FAP1P53971 965 aa10.46□□□□□ -0.73
YPR039WYPR039W PRY3P47033 881 aa9.83□□□□□ -0.84
YPR039WYPR039W PRI1P10363 409 aa9.73□□□□□ -0.85
YPR039WYPR039W AAD16Q02895 342 aa9.67□□□□□ -0.86
YPR039WYPR039W ISW2Q08773 1120 aa9.54□□□□□ -0.88
YPR039WYPR039W RPG1P38249 964 aaKnown RBP9.5□□□□□ -0.89
YPR039WYPR039W DIP2Q12220 943 aaPredicted RBP9.46□□□□□ -0.9
YPR039WYPR039W YCK3P39962 524 aa9.31□□□□□ -0.92
YPR039WYPR039W TSR3Q12094 313 aaKnown RBP9.26□□□□□ -0.93
YPR039WYPR039W HAA1Q12753 694 aaKnown RBP9.14□□□□□ -0.95
YPR039WYPR039W RSE1Q04693 1361 aaKnown RBP9.12□□□□□ -0.95
YPR039WYPR039W AVT3P36062 692 aa9.08□□□□□ -0.96
YPR039WYPR039W BFR2Q06631 534 aaKnown RBP8.93□□□□□ -0.98
YPR039WYPR039W RPL17AP05740 184 aaKnown RBP8.87□□□□□ -0.99
YPR039WYPR039W RPL17BP46990 184 aaKnown RBP8.87□□□□□ -0.99
YPR039WYPR039W MRPL32P25348 183 aa8.83□□□□□ -1
YPR039WYPR039W REB1P21538 810 aa8.81□□□□□ -1
YPR039WYPR039W YGL015CP33199 130 aa8.45□□□□□ -1.06
YPR039WYPR039W SPT21P35209 758 aa8.45□□□□□ -1.06
YPR039WYPR039W CDC27P38042 758 aa8.44□□□□□ -1.06
YPR039WYPR039W YKR023WP36119 530 aaKnown RBP8.4□□□□□ -1.06
YPR039WYPR039W HOP09932 586 aa8.27□□□□□ -1.09
YPR039WYPR039W DCD1P06773 312 aa8.26□□□□□ -1.09
YPR039WYPR039W TFC8Q12308 588 aa8.2□□□□□ -1.1
YPR039WYPR039W MAP2P38174 421 aaKnown RBP8.17□□□□□ -1.1
YPR039WYPR039W RIM101P33400 625 aa8.15□□□□□ -1.1
YPR039WYPR039W UBP10P53874 792 aaPredicted RBP8.09□□□□□ -1.11
YPR039WYPR039W SCY1P53009 804 aa8□□□□□ -1.13
YPR039WYPR039W BCH2P36122 765 aa7.95□□□□□ -1.14
YPR039WYPR039W OXP1P28273 1286 aa7.92□□□□□ -1.14
YPR039WYPR039W SLX5P32828 619 aaKnown RBP7.85□□□□□ -1.15
YPR039WYPR039W TFA1P36100 482 aa7.79□□□□□ -1.16
YPR039WYPR039W PTP3P40048 928 aa7.78□□□□□ -1.16
YPR039WYPR039W TIF4632P39936 914 aaKnown RBP7.77□□□□□ -1.17
YPR039WYPR039W YIL055CP40523 627 aaKnown RBP7.77□□□□□ -1.17
YPR039WYPR039W BUD31P25337 157 aaPredicted RBP7.75□□□□□ -1.17
YPR039WYPR039W TGL3P40308 642 aa7.74□□□□□ -1.17
YPR039WYPR039W EPS1P40557 701 aa7.74□□□□□ -1.17
YPR039WYPR039W BDF1P35817 686 aa7.72□□□□□ -1.17
YPR039WYPR039W YAH1Q12184 172 aaKnown RBP7.72□□□□□ -1.17
YPR039WYPR039W RSM7P47150 247 aa7.65□□□□□ -1.18
YPR039WYPR039W AI2P03876 854 aa7.6□□□□□ -1.19
YPR039WYPR039W BBC1P47068 1157 aa7.56□□□□□ -1.2
YPR039WYPR039W YLR271WQ06152 274 aa7.54□□□□□ -1.2
YPR039WYPR039W UBP9P39967 754 aa7.5□□□□□ -1.21
YPR039WYPR039W MST1P07236 462 aa7.41□□□□□ -1.22
YPR039WYPR039W SIS1P25294 352 aaKnown RBP7.41□□□□□ -1.22
YPR039WYPR039W SSP1P38871 571 aa7.41□□□□□ -1.22
YPR039WYPR039W YOR238WQ08634 303 aa7.41□□□□□ -1.22
YPR039WYPR039W PSD2P53037 1138 aaKnown RBP7.4□□□□□ -1.22
YPR039WYPR039W YBL029C-AQ3E756 94 aa7.37□□□□□ -1.23
YPR039WYPR039W MRM1P25270 412 aa7.34□□□□□ -1.23
YPR039WYPR039W YAP5P40574 245 aa7.34□□□□□ -1.23
YPR039WYPR039W NSR1P27476 414 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
YPR039WYPR039W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
YPR039WYPR039W CST9Q06032 482 aa7.3□□□□□ -1.24
YPR039WYPR039W PIB1Q06651 286 aa7.29□□□□□ -1.24
YPR039WYPR039W WSC3Q12215 556 aa7.28□□□□□ -1.24
YPR039WYPR039W VNX1P42839 908 aa7.26□□□□□ -1.25
YPR039WYPR039W MGA2P40578 1113 aa7.22□□□□□ -1.25
YPR039WYPR039W GTT3P39996 337 aa7.2□□□□□ -1.26
YPR039WYPR039W SPP1Q03012 353 aa7.19□□□□□ -1.26
YPR039WYPR039W VPS29P38759 282 aa7.16□□□□□ -1.26
YPR039WYPR039W RTG3P38165 486 aa7.14□□□□□ -1.27
YPR039WYPR039W RCR1P38212 213 aa7.14□□□□□ -1.27
YPR039WYPR039W YFR006WP43590 535 aa7.14□□□□□ -1.27
YPR039WYPR039W DBP1P24784 617 aaKnown RBP7.12□□□□□ -1.27
YPR039WYPR039W TIF11P38912 153 aaKnown RBP7.11□□□□□ -1.27
YPR039WYPR039W YMR1P47147 688 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
YPR039WYPR039W STS1P38637 319 aa7.08□□□□□ -1.28
YPR039WYPR039W ULI1P43604 169 aa7.05□□□□□ -1.28
YPR039WYPR039W SET4P42948 560 aa7.03□□□□□ -1.28
YPR039WYPR039W IOC2Q12072 812 aa7.03□□□□□ -1.28
YPR039WYPR039W LDB19Q12502 818 aa7.03□□□□□ -1.28
YPR039WYPR039W YOL036WQ08206 761 aa7.02□□□□□ -1.29
YPR039WYPR039W VMA1P17255 1071 aaKnown RBP7.01□□□□□ -1.29
YPR039WYPR039W AIR2Q12476 344 aaKnown RBP7.01□□□□□ -1.29
YPR039WYPR039W FKH1P40466 484 aa6.99□□□□□ -1.29
YPR039WYPR039W MSB4Q12317 492 aa6.97□□□□□ -1.29
YPR039WYPR039W TRP5P00931 707 aaKnown RBP6.95□□□□□ -1.3
YPR039WYPR039W YJL171CP46992 396 aa6.94□□□□□ -1.3
YPR039WYPR039W EAP1P36041 632 aaKnown RBP6.93□□□□□ -1.3
YPR039WYPR039W SAM3Q08986 587 aa6.93□□□□□ -1.3
YPR039WYPR039W RTG1P32607 177 aa6.9□□□□□ -1.3
YPR039WYPR039W RAM2P29703 316 aa6.89□□□□□ -1.31
YPR039WYPR039W GYP5Q12344 894 aa6.87□□□□□ -1.31
YPR039WYPR039W DCW1P36091 449 aa6.85□□□□□ -1.31
YPR039WYPR039W NCR1Q12200 1170 aa6.85□□□□□ -1.31
YPR039WYPR039W YNL035CP53962 389 aaKnown RBP6.84□□□□□ -1.31
YPR039WYPR039W BMT6Q12291 365 aa6.84□□□□□ -1.31
YPR039WYPR039W MIF2P35201 549 aa6.83□□□□□ -1.32
YPR039WYPR039W MAK11P20484 414 aaKnown RBP6.81□□□□□ -1.32
YPR039WYPR039W EDS1P38073 919 aa6.8□□□□□ -1.32
YPR039WYPR039W HTA1P04911 132 aaKnown RBP6.79□□□□□ -1.32
YPR039WYPR039W HTA2P04912 132 aa6.79□□□□□ -1.32
YPR039WYPR039W SEC61P32915 480 aa6.79□□□□□ -1.32
YPR039WYPR039W DAN4P47179 1161 aa6.78□□□□□ -1.32
YPR039WYPR039W PTC3P34221 468 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms