RNA–Protein interactions for RNA: YPL230W

USV1, Transcript of Putative transcription factor containing a C2H2 zinc finger, yeastyeast

Gene USV1, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USV1YPL230W MTC1P47018 478 aaKnown RBP16.47■□□□□ 0.23
USV1YPL230W FAP1P53971 965 aa15.46■□□□□ 0.07
USV1YPL230W DRS1P32892 752 aaKnown RBP14.95□□□□□ -0.02
USV1YPL230W PRY3P47033 881 aa14.51□□□□□ -0.09
USV1YPL230W AAD16Q02895 342 aa14.15□□□□□ -0.14
USV1YPL230W PRI1P10363 409 aa14.14□□□□□ -0.15
USV1YPL230W ISW2Q08773 1120 aa13.82□□□□□ -0.2
USV1YPL230W RPG1P38249 964 aaKnown RBP13.64□□□□□ -0.23
USV1YPL230W HAA1Q12753 694 aaKnown RBP13.58□□□□□ -0.24
USV1YPL230W YCK3P39962 524 aa13.51□□□□□ -0.25
USV1YPL230W TSR3Q12094 313 aaKnown RBP13.36□□□□□ -0.27
USV1YPL230W DIP2Q12220 943 aaPredicted RBP13.27□□□□□ -0.29
USV1YPL230W RSE1Q04693 1361 aaKnown RBP12.97□□□□□ -0.33
USV1YPL230W MRPL32P25348 183 aa12.89□□□□□ -0.35
USV1YPL230W REB1P21538 810 aa12.63□□□□□ -0.39
USV1YPL230W AVT3P36062 692 aa12.59□□□□□ -0.39
USV1YPL230W RPL17AP05740 184 aaKnown RBP12.58□□□□□ -0.4
USV1YPL230W RPL17BP46990 184 aaKnown RBP12.58□□□□□ -0.4
USV1YPL230W YGL015CP33199 130 aa12.48□□□□□ -0.41
USV1YPL230W BFR2Q06631 534 aaKnown RBP12.21□□□□□ -0.45
USV1YPL230W CDC27P38042 758 aa12.06□□□□□ -0.48
USV1YPL230W SPT21P35209 758 aa11.93□□□□□ -0.5
USV1YPL230W YKR023WP36119 530 aaKnown RBP11.91□□□□□ -0.5
USV1YPL230W UBP10P53874 792 aaPredicted RBP11.84□□□□□ -0.51
USV1YPL230W MAP2P38174 421 aaKnown RBP11.78□□□□□ -0.52
USV1YPL230W HOP09932 586 aa11.71□□□□□ -0.53
USV1YPL230W TFC8Q12308 588 aa11.7□□□□□ -0.54
USV1YPL230W DCD1P06773 312 aa11.67□□□□□ -0.54
USV1YPL230W BUD31P25337 157 aaPredicted RBP11.6□□□□□ -0.55
USV1YPL230W SCY1P53009 804 aa11.49□□□□□ -0.57
USV1YPL230W TIF4632P39936 914 aaKnown RBP11.43□□□□□ -0.58
USV1YPL230W RIM101P33400 625 aa11.42□□□□□ -0.58
USV1YPL230W SLX5P32828 619 aaKnown RBP11.38□□□□□ -0.59
USV1YPL230W TGL3P40308 642 aa11.32□□□□□ -0.6
USV1YPL230W BCH2P36122 765 aa11.3□□□□□ -0.6
USV1YPL230W UBP9P39967 754 aa11.19□□□□□ -0.62
USV1YPL230W SIS1P25294 352 aaKnown RBP11.07□□□□□ -0.64
USV1YPL230W OXP1P28273 1286 aa11□□□□□ -0.65
USV1YPL230W EPS1P40557 701 aa11□□□□□ -0.65
USV1YPL230W PTP3P40048 928 aa10.99□□□□□ -0.65
USV1YPL230W YIL055CP40523 627 aaKnown RBP10.98□□□□□ -0.65
USV1YPL230W BDF1P35817 686 aa10.96□□□□□ -0.65
USV1YPL230W BBC1P47068 1157 aa10.8□□□□□ -0.68
USV1YPL230W YOR238WQ08634 303 aa10.76□□□□□ -0.69
USV1YPL230W MST1P07236 462 aa10.74□□□□□ -0.69
USV1YPL230W RSM7P47150 247 aa10.74□□□□□ -0.69
USV1YPL230W YAH1Q12184 172 aaKnown RBP10.71□□□□□ -0.69
USV1YPL230W YBL029C-AQ3E756 94 aa10.7□□□□□ -0.7
USV1YPL230W AI2P03876 854 aa10.69□□□□□ -0.7
USV1YPL230W NSR1P27476 414 aaKnown RBP RIP-Chip data10.66□□□□□ -0.7not detected
USV1YPL230W YAP5P40574 245 aa10.63□□□□□ -0.71
USV1YPL230W TFA1P36100 482 aa10.6□□□□□ -0.71
USV1YPL230W VNX1P42839 908 aa10.55□□□□□ -0.72
USV1YPL230W SPP1Q03012 353 aa10.51□□□□□ -0.73
USV1YPL230W WSC3Q12215 556 aa10.49□□□□□ -0.73
USV1YPL230W GTT3P39996 337 aa10.45□□□□□ -0.74
USV1YPL230W YLR271WQ06152 274 aa10.44□□□□□ -0.74
USV1YPL230W TIF11P38912 153 aaKnown RBP10.34□□□□□ -0.75
USV1YPL230W PSD2P53037 1138 aaKnown RBP10.34□□□□□ -0.75
USV1YPL230W YJL171CP46992 396 aa10.3□□□□□ -0.76
USV1YPL230W MRM1P25270 412 aa10.29□□□□□ -0.76
USV1YPL230W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.29□□□□□ -0.76not detected
USV1YPL230W PIB1Q06651 286 aa10.28□□□□□ -0.76
USV1YPL230W AIR2Q12476 344 aaKnown RBP10.24□□□□□ -0.77
USV1YPL230W SSP1P38871 571 aa10.23□□□□□ -0.77
USV1YPL230W FKH1P40466 484 aa10.23□□□□□ -0.77
USV1YPL230W ULI1P43604 169 aa10.21□□□□□ -0.77
USV1YPL230W LDB19Q12502 818 aa10.2□□□□□ -0.78
USV1YPL230W MSB4Q12317 492 aa10.13□□□□□ -0.79
USV1YPL230W IOC2Q12072 812 aa10.12□□□□□ -0.79
USV1YPL230W EAP1P36041 632 aaKnown RBP10.11□□□□□ -0.79
USV1YPL230W YMR1P47147 688 aaKnown RBP RIP-Chip data10.09□□□□□ -0.79not detected
USV1YPL230W BMT6Q12291 365 aa10.08□□□□□ -0.8
USV1YPL230W DBP1P24784 617 aaKnown RBP10.05□□□□□ -0.8
USV1YPL230W RTG3P38165 486 aa10.05□□□□□ -0.8
USV1YPL230W MGA2P40578 1113 aa10.05□□□□□ -0.8
USV1YPL230W SET4P42948 560 aa10.05□□□□□ -0.8
USV1YPL230W CST9Q06032 482 aa10.05□□□□□ -0.8
USV1YPL230W YOL036WQ08206 761 aa10.03□□□□□ -0.8
USV1YPL230W VPS29P38759 282 aa10□□□□□ -0.81
USV1YPL230W YFR006WP43590 535 aa10□□□□□ -0.81
USV1YPL230W TRP5P00931 707 aaKnown RBP9.98□□□□□ -0.81
USV1YPL230W RTG1P32607 177 aa9.98□□□□□ -0.81
USV1YPL230W VMA1P17255 1071 aaKnown RBP9.96□□□□□ -0.82
USV1YPL230W STS1P38637 319 aa9.93□□□□□ -0.82
USV1YPL230W NCR1Q12200 1170 aa9.93□□□□□ -0.82
USV1YPL230W YNL035CP53962 389 aaKnown RBP9.9□□□□□ -0.82
USV1YPL230W SEC61P32915 480 aa9.88□□□□□ -0.83
USV1YPL230W SAM3Q08986 587 aa9.88□□□□□ -0.83
USV1YPL230W TFG1P41895 735 aaPredicted RBP9.86□□□□□ -0.83
USV1YPL230W RCR1P38212 213 aa9.85□□□□□ -0.83
USV1YPL230W ABP1P15891 592 aaKnown RBP9.8□□□□□ -0.84
USV1YPL230W GYP5Q12344 894 aa9.78□□□□□ -0.84
USV1YPL230W JIP4Q03361 876 aa9.76□□□□□ -0.85
USV1YPL230W HTA1P04911 132 aaKnown RBP9.73□□□□□ -0.85
USV1YPL230W HTA2P04912 132 aa9.73□□□□□ -0.85
USV1YPL230W SAP30P38429 201 aa9.71□□□□□ -0.86
USV1YPL230W DCW1P36091 449 aa9.7□□□□□ -0.86
USV1YPL230W DAN4P47179 1161 aa9.7□□□□□ -0.86
USV1YPL230W YDL129WQ07555 291 aa9.67□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms