RNA–Protein interactions for RNA: YPL154C

PEP4, Transcript of Vacuolar aspartyl protease (proteinase A), yeastyeast

Gene PEP4, Length 1,218 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP4YPL154C MTC1P47018 478 aaKnown RBP14.67□□□□□ -0.06
PEP4YPL154C DRS1P32892 752 aaKnown RBP13.65□□□□□ -0.22
PEP4YPL154C FAP1P53971 965 aa13.28□□□□□ -0.28
PEP4YPL154C PRY3P47033 881 aa12.48□□□□□ -0.41
PEP4YPL154C PRI1P10363 409 aa12.4□□□□□ -0.42
PEP4YPL154C AAD16Q02895 342 aa12.33□□□□□ -0.44
PEP4YPL154C ISW2Q08773 1120 aa12.16□□□□□ -0.46
PEP4YPL154C RPG1P38249 964 aaKnown RBP12.05□□□□□ -0.48
PEP4YPL154C DIP2Q12220 943 aaPredicted RBP11.99□□□□□ -0.49
PEP4YPL154C YCK3P39962 524 aa11.8□□□□□ -0.52
PEP4YPL154C TSR3Q12094 313 aaKnown RBP11.73□□□□□ -0.53
PEP4YPL154C HAA1Q12753 694 aaKnown RBP11.68□□□□□ -0.54
PEP4YPL154C RSE1Q04693 1361 aaKnown RBP11.59□□□□□ -0.55
PEP4YPL154C AVT3P36062 692 aa11.53□□□□□ -0.56
PEP4YPL154C BFR2Q06631 534 aaKnown RBP11.31□□□□□ -0.6
PEP4YPL154C MRPL32P25348 183 aa11.25□□□□□ -0.61
PEP4YPL154C RPL17AP05740 184 aaKnown RBP11.24□□□□□ -0.61
PEP4YPL154C RPL17BP46990 184 aaKnown RBP11.24□□□□□ -0.61
PEP4YPL154C REB1P21538 810 aa11.19□□□□□ -0.62
PEP4YPL154C YGL015CP33199 130 aa10.8□□□□□ -0.68
PEP4YPL154C SPT21P35209 758 aa10.74□□□□□ -0.69
PEP4YPL154C CDC27P38042 758 aa10.7□□□□□ -0.7
PEP4YPL154C YKR023WP36119 530 aaKnown RBP10.65□□□□□ -0.7
PEP4YPL154C HOP09932 586 aa10.44□□□□□ -0.74
PEP4YPL154C TFC8Q12308 588 aa10.43□□□□□ -0.74
PEP4YPL154C DCD1P06773 312 aa10.41□□□□□ -0.74
PEP4YPL154C MAP2P38174 421 aaKnown RBP10.37□□□□□ -0.75
PEP4YPL154C UBP10P53874 792 aaPredicted RBP10.37□□□□□ -0.75
PEP4YPL154C RIM101P33400 625 aa10.36□□□□□ -0.75
PEP4YPL154C MON2P48563 1636 aaPredicted RBP10.3□□□□□ -0.76
PEP4YPL154C INO80P53115 1489 aa10.23□□□□□ -0.77
PEP4YPL154C SCY1P53009 804 aa10.15□□□□□ -0.78
PEP4YPL154C BCH2P36122 765 aa10.1□□□□□ -0.79
PEP4YPL154C OXP1P28273 1286 aa10.03□□□□□ -0.8
PEP4YPL154C SLX5P32828 619 aaKnown RBP10.01□□□□□ -0.81
PEP4YPL154C TIF4632P39936 914 aaKnown RBP9.95□□□□□ -0.82
PEP4YPL154C BUD31P25337 157 aaPredicted RBP9.92□□□□□ -0.82
PEP4YPL154C TGL3P40308 642 aa9.9□□□□□ -0.82
PEP4YPL154C TFA1P36100 482 aa9.89□□□□□ -0.83
PEP4YPL154C YIL055CP40523 627 aaKnown RBP9.87□□□□□ -0.83
PEP4YPL154C PTP3P40048 928 aa9.85□□□□□ -0.83
PEP4YPL154C EPS1P40557 701 aa9.84□□□□□ -0.83
PEP4YPL154C BDF1P35817 686 aa9.8□□□□□ -0.84
PEP4YPL154C DNA2P38859 1522 aa9.76□□□□□ -0.85
PEP4YPL154C RSM7P47150 247 aa9.72□□□□□ -0.85
PEP4YPL154C YAH1Q12184 172 aaKnown RBP9.72□□□□□ -0.85
PEP4YPL154C SWR1Q05471 1514 aa9.67□□□□□ -0.86
PEP4YPL154C AI2P03876 854 aa9.63□□□□□ -0.87
PEP4YPL154C BBC1P47068 1157 aa9.63□□□□□ -0.87
PEP4YPL154C KOG1P38873 1557 aa9.62□□□□□ -0.87
PEP4YPL154C UBP9P39967 754 aa9.61□□□□□ -0.87
PEP4YPL154C YLR271WQ06152 274 aa9.55□□□□□ -0.88
PEP4YPL154C TCB3Q03640 1545 aaKnown RBP9.52□□□□□ -0.88
PEP4YPL154C TY1B-DR4Q07793 1604 aa9.51□□□□□ -0.89
PEP4YPL154C MST1P07236 462 aa9.49□□□□□ -0.89
PEP4YPL154C YOR238WQ08634 303 aa9.47□□□□□ -0.89
PEP4YPL154C SIS1P25294 352 aaKnown RBP9.44□□□□□ -0.9
PEP4YPL154C NSR1P27476 414 aaKnown RBP RIP-Chip data9.43□□□□□ -0.9not detected
PEP4YPL154C SSP1P38871 571 aa9.41□□□□□ -0.9
PEP4YPL154C PSD2P53037 1138 aaKnown RBP9.41□□□□□ -0.9
PEP4YPL154C YAP5P40574 245 aa9.38□□□□□ -0.91
PEP4YPL154C YBL029C-AQ3E756 94 aa9.36□□□□□ -0.91
PEP4YPL154C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.34□□□□□ -0.91not detected
PEP4YPL154C MRM1P25270 412 aa9.29□□□□□ -0.92
PEP4YPL154C VNX1P42839 908 aa9.26□□□□□ -0.93
PEP4YPL154C CST9Q06032 482 aa9.22□□□□□ -0.93
PEP4YPL154C WSC3Q12215 556 aa9.22□□□□□ -0.93
PEP4YPL154C PIB1Q06651 286 aa9.19□□□□□ -0.94
PEP4YPL154C GTT3P39996 337 aa9.18□□□□□ -0.94
PEP4YPL154C MGA2P40578 1113 aa9.18□□□□□ -0.94
PEP4YPL154C SPP1Q03012 353 aa9.17□□□□□ -0.94
PEP4YPL154C SGS1P35187 1447 aa9.15□□□□□ -0.94
PEP4YPL154C HSL1P34244 1518 aa9.1□□□□□ -0.95
PEP4YPL154C SPT6P23615 1451 aaKnown RBP9.09□□□□□ -0.95
PEP4YPL154C VPS29P38759 282 aa9.09□□□□□ -0.95
PEP4YPL154C RTG3P38165 486 aa9.08□□□□□ -0.96
PEP4YPL154C TIF11P38912 153 aaKnown RBP9.08□□□□□ -0.96
PEP4YPL154C SPA2P23201 1466 aaKnown RBP9.08□□□□□ -0.96
PEP4YPL154C YMR1P47147 688 aaKnown RBP RIP-Chip data9.06□□□□□ -0.96not detected
PEP4YPL154C DBP1P24784 617 aaKnown RBP9.04□□□□□ -0.96
PEP4YPL154C YFR006WP43590 535 aa9.02□□□□□ -0.97
PEP4YPL154C RCR1P38212 213 aa9.01□□□□□ -0.97
PEP4YPL154C ECM5Q03214 1411 aa8.99□□□□□ -0.97
PEP4YPL154C STS1P38637 319 aa8.99□□□□□ -0.97
PEP4YPL154C ULI1P43604 169 aa8.99□□□□□ -0.97
PEP4YPL154C IOC2Q12072 812 aa8.96□□□□□ -0.98
PEP4YPL154C FKH1P40466 484 aa8.95□□□□□ -0.98
PEP4YPL154C AIR2Q12476 344 aaKnown RBP8.95□□□□□ -0.98
PEP4YPL154C LDB19Q12502 818 aa8.95□□□□□ -0.98
PEP4YPL154C THO2P53552 1597 aaKnown RBP8.95□□□□□ -0.98
PEP4YPL154C MSB4Q12317 492 aa8.94□□□□□ -0.98
PEP4YPL154C VMA1P17255 1071 aaKnown RBP8.93□□□□□ -0.98
PEP4YPL154C SET4P42948 560 aa8.93□□□□□ -0.98
PEP4YPL154C YOL036WQ08206 761 aa8.93□□□□□ -0.98
PEP4YPL154C BUD4P47136 1447 aa8.92□□□□□ -0.98
PEP4YPL154C EAP1P36041 632 aaKnown RBP8.89□□□□□ -0.99
PEP4YPL154C HIR3P47171 1648 aa8.88□□□□□ -0.99
PEP4YPL154C SAM3Q08986 587 aa8.87□□□□□ -0.99
PEP4YPL154C YJL171CP46992 396 aa8.86□□□□□ -0.99
PEP4YPL154C TRP5P00931 707 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms