RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W MTC1P47018 478 aaKnown RBP12.11□□□□□ -0.47
UBP16YPL072W DRS1P32892 752 aaKnown RBP11.55□□□□□ -0.56
UBP16YPL072W FAP1P53971 965 aa10.84□□□□□ -0.67
UBP16YPL072W PRY3P47033 881 aa10.2□□□□□ -0.78
UBP16YPL072W PRI1P10363 409 aa10.06□□□□□ -0.8
UBP16YPL072W DIP2Q12220 943 aaPredicted RBP10.03□□□□□ -0.8
UBP16YPL072W ISW2Q08773 1120 aa9.98□□□□□ -0.81
UBP16YPL072W AAD16Q02895 342 aa9.96□□□□□ -0.82
UBP16YPL072W RPG1P38249 964 aaKnown RBP9.85□□□□□ -0.83
UBP16YPL072W AVT3P36062 692 aa9.76□□□□□ -0.85
UBP16YPL072W BFR2Q06631 534 aaKnown RBP9.72□□□□□ -0.85
UBP16YPL072W RSE1Q04693 1361 aaKnown RBP9.64□□□□□ -0.87
UBP16YPL072W TSR3Q12094 313 aaKnown RBP9.5□□□□□ -0.89
UBP16YPL072W YCK3P39962 524 aa9.48□□□□□ -0.89
UBP16YPL072W HAA1Q12753 694 aaKnown RBP9.47□□□□□ -0.89
UBP16YPL072W RPL17AP05740 184 aaKnown RBP9.3□□□□□ -0.92
UBP16YPL072W RPL17BP46990 184 aaKnown RBP9.3□□□□□ -0.92
UBP16YPL072W REB1P21538 810 aa9.24□□□□□ -0.93
UBP16YPL072W MRPL32P25348 183 aa9.15□□□□□ -0.95
UBP16YPL072W SPT21P35209 758 aa8.93□□□□□ -0.98
UBP16YPL072W YKR023WP36119 530 aaKnown RBP8.77□□□□□ -1.01
UBP16YPL072W TFA1P36100 482 aa8.76□□□□□ -1.01
UBP16YPL072W CDC27P38042 758 aa8.72□□□□□ -1.01
UBP16YPL072W YGL015CP33199 130 aa8.71□□□□□ -1.01
UBP16YPL072W RIM101P33400 625 aa8.7□□□□□ -1.02
UBP16YPL072W TFC8Q12308 588 aa8.59□□□□□ -1.03
UBP16YPL072W HOP09932 586 aa8.57□□□□□ -1.04
UBP16YPL072W DCD1P06773 312 aa8.51□□□□□ -1.05
UBP16YPL072W UBP10P53874 792 aaPredicted RBP8.48□□□□□ -1.05
UBP16YPL072W MAP2P38174 421 aaKnown RBP8.42□□□□□ -1.06
UBP16YPL072W OXP1P28273 1286 aa8.39□□□□□ -1.07
UBP16YPL072W BCH2P36122 765 aa8.32□□□□□ -1.08
UBP16YPL072W SCY1P53009 804 aa8.29□□□□□ -1.08
UBP16YPL072W YIL055CP40523 627 aaKnown RBP8.28□□□□□ -1.08
UBP16YPL072W PTP3P40048 928 aa8.24□□□□□ -1.09
UBP16YPL072W BUD31P25337 157 aaPredicted RBP8.24□□□□□ -1.09
UBP16YPL072W SLX5P32828 619 aaKnown RBP8.19□□□□□ -1.1
UBP16YPL072W RSM7P47150 247 aa8.15□□□□□ -1.1
UBP16YPL072W YAH1Q12184 172 aaKnown RBP8.15□□□□□ -1.1
UBP16YPL072W EPS1P40557 701 aa8.13□□□□□ -1.11
UBP16YPL072W TIF4632P39936 914 aaKnown RBP8.13□□□□□ -1.11
UBP16YPL072W BDF1P35817 686 aa8.09□□□□□ -1.11
UBP16YPL072W TGL3P40308 642 aa8.08□□□□□ -1.12
UBP16YPL072W YLR271WQ06152 274 aa8.06□□□□□ -1.12
UBP16YPL072W AI2P03876 854 aa8.05□□□□□ -1.12
UBP16YPL072W BBC1P47068 1157 aa8.05□□□□□ -1.12
UBP16YPL072W SSP1P38871 571 aa8.03□□□□□ -1.12
UBP16YPL072W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
UBP16YPL072W PSD2P53037 1138 aaKnown RBP7.92□□□□□ -1.14
UBP16YPL072W SIS1P25294 352 aaKnown RBP7.83□□□□□ -1.16
UBP16YPL072W NSR1P27476 414 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
UBP16YPL072W MGA2P40578 1113 aa7.82□□□□□ -1.16
UBP16YPL072W MST1P07236 462 aa7.78□□□□□ -1.16
UBP16YPL072W CST9Q06032 482 aa7.78□□□□□ -1.16
UBP16YPL072W MRM1P25270 412 aa7.77□□□□□ -1.17
UBP16YPL072W YOR238WQ08634 303 aa7.77□□□□□ -1.17
UBP16YPL072W UBP9P39967 754 aa7.76□□□□□ -1.17
UBP16YPL072W YAP5P40574 245 aa7.75□□□□□ -1.17
UBP16YPL072W RTG3P38165 486 aa7.64□□□□□ -1.19
UBP16YPL072W VPS29P38759 282 aa7.61□□□□□ -1.19
UBP16YPL072W YMR1P47147 688 aaKnown RBP RIP-Chip data7.58□□□□□ -1.2not detected
UBP16YPL072W YBL029C-AQ3E756 94 aa7.57□□□□□ -1.2
UBP16YPL072W RCR1P38212 213 aa7.56□□□□□ -1.2
UBP16YPL072W GTT3P39996 337 aa7.56□□□□□ -1.2
UBP16YPL072W PIB1Q06651 286 aa7.56□□□□□ -1.2
UBP16YPL072W DBP1P24784 617 aaKnown RBP7.53□□□□□ -1.2
UBP16YPL072W VNX1P42839 908 aa7.53□□□□□ -1.2
UBP16YPL072W STS1P38637 319 aa7.51□□□□□ -1.21
UBP16YPL072W WSC3Q12215 556 aa7.5□□□□□ -1.21
UBP16YPL072W YFR006WP43590 535 aa7.49□□□□□ -1.21
UBP16YPL072W SPP1Q03012 353 aa7.46□□□□□ -1.22
UBP16YPL072W VMA1P17255 1071 aaKnown RBP7.44□□□□□ -1.22
UBP16YPL072W RAM2P29703 316 aa7.42□□□□□ -1.22
UBP16YPL072W TIF11P38912 153 aaKnown RBP7.42□□□□□ -1.22
UBP16YPL072W MSB4Q12317 492 aa7.42□□□□□ -1.22
UBP16YPL072W SAM3Q08986 587 aa7.4□□□□□ -1.22
UBP16YPL072W MAK11P20484 414 aaKnown RBP7.38□□□□□ -1.23
UBP16YPL072W YOL036WQ08206 761 aa7.38□□□□□ -1.23
UBP16YPL072W EAP1P36041 632 aaKnown RBP7.36□□□□□ -1.23
UBP16YPL072W SET4P42948 560 aa7.36□□□□□ -1.23
UBP16YPL072W ULI1P43604 169 aa7.36□□□□□ -1.23
UBP16YPL072W IOC2Q12072 812 aa7.33□□□□□ -1.24
UBP16YPL072W GYP5Q12344 894 aa7.3□□□□□ -1.24
UBP16YPL072W LDB19Q12502 818 aa7.3□□□□□ -1.24
UBP16YPL072W ABP1P15891 592 aaKnown RBP7.29□□□□□ -1.24
UBP16YPL072W MIF2P35201 549 aa7.29□□□□□ -1.24
UBP16YPL072W TRP5P00931 707 aaKnown RBP7.28□□□□□ -1.24
UBP16YPL072W FKH1P40466 484 aa7.28□□□□□ -1.24
UBP16YPL072W COQ8P27697 501 aa7.27□□□□□ -1.25
UBP16YPL072W EDS1P38073 919 aa7.27□□□□□ -1.25
UBP16YPL072W AIR2Q12476 344 aaKnown RBP7.26□□□□□ -1.25
UBP16YPL072W PTC3P34221 468 aaKnown RBP7.24□□□□□ -1.25
UBP16YPL072W GRE2Q12068 342 aaKnown RBP7.23□□□□□ -1.25
UBP16YPL072W HTA1P04911 132 aaKnown RBP7.22□□□□□ -1.25
UBP16YPL072W HTA2P04912 132 aa7.22□□□□□ -1.25
UBP16YPL072W DCW1P36091 449 aa7.22□□□□□ -1.25
UBP16YPL072W YNL035CP53962 389 aaKnown RBP7.22□□□□□ -1.25
UBP16YPL072W NOP53Q12080 455 aaKnown RBP7.22□□□□□ -1.25
UBP16YPL072W RTG1P32607 177 aa7.21□□□□□ -1.26
UBP16YPL072W GUT1P32190 709 aa7.19□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms