RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W MTC1P47018 478 aaKnown RBP8.67□□□□□ -1.02
SGF11YPL047W FAP1P53971 965 aa8.41□□□□□ -1.06
SGF11YPL047W PRY3P47033 881 aa7.95□□□□□ -1.14
SGF11YPL047W DRS1P32892 752 aaKnown RBP7.7□□□□□ -1.18
SGF11YPL047W PRI1P10363 409 aa7.53□□□□□ -1.2
SGF11YPL047W AAD16Q02895 342 aa7.53□□□□□ -1.2
SGF11YPL047W YCK3P39962 524 aa7.51□□□□□ -1.21
SGF11YPL047W HAA1Q12753 694 aaKnown RBP7.35□□□□□ -1.23
SGF11YPL047W ISW2Q08773 1120 aa7.26□□□□□ -1.25
SGF11YPL047W RPG1P38249 964 aaKnown RBP7.22□□□□□ -1.25
SGF11YPL047W TSR3Q12094 313 aaKnown RBP7.12□□□□□ -1.27
SGF11YPL047W DIP2Q12220 943 aaPredicted RBP6.88□□□□□ -1.31
SGF11YPL047W MRPL32P25348 183 aa6.81□□□□□ -1.32
SGF11YPL047W RSE1Q04693 1361 aaKnown RBP6.77□□□□□ -1.33
SGF11YPL047W YGL015CP33199 130 aa6.65□□□□□ -1.34
SGF11YPL047W RPL17AP05740 184 aaKnown RBP6.6□□□□□ -1.35
SGF11YPL047W REB1P21538 810 aa6.6□□□□□ -1.35
SGF11YPL047W RPL17BP46990 184 aaKnown RBP6.6□□□□□ -1.35
SGF11YPL047W AVT3P36062 692 aa6.52□□□□□ -1.37
SGF11YPL047W BUD31P25337 157 aaPredicted RBP6.51□□□□□ -1.37
SGF11YPL047W CDC27P38042 758 aa6.42□□□□□ -1.38
SGF11YPL047W YKR023WP36119 530 aaKnown RBP6.31□□□□□ -1.4
SGF11YPL047W SPT21P35209 758 aa6.27□□□□□ -1.41
SGF11YPL047W MAP2P38174 421 aaKnown RBP6.27□□□□□ -1.41
SGF11YPL047W UBP10P53874 792 aaPredicted RBP6.26□□□□□ -1.41
SGF11YPL047W BFR2Q06631 534 aaKnown RBP6.2□□□□□ -1.42
SGF11YPL047W DCD1P06773 312 aa6.19□□□□□ -1.42
SGF11YPL047W HOP09932 586 aa6.19□□□□□ -1.42
SGF11YPL047W TFC8Q12308 588 aa6.17□□□□□ -1.42
SGF11YPL047W SIS1P25294 352 aaKnown RBP6.12□□□□□ -1.43
SGF11YPL047W SCY1P53009 804 aa6.07□□□□□ -1.44
SGF11YPL047W SLX5P32828 619 aaKnown RBP6□□□□□ -1.45
SGF11YPL047W TIF4632P39936 914 aaKnown RBP6□□□□□ -1.45
SGF11YPL047W TGL3P40308 642 aa5.98□□□□□ -1.45
SGF11YPL047W RIM101P33400 625 aa5.96□□□□□ -1.46
SGF11YPL047W BCH2P36122 765 aa5.95□□□□□ -1.46
SGF11YPL047W UBP9P39967 754 aa5.93□□□□□ -1.46
SGF11YPL047W EPS1P40557 701 aa5.78□□□□□ -1.48
SGF11YPL047W OXP1P28273 1286 aa5.76□□□□□ -1.49
SGF11YPL047W BDF1P35817 686 aa5.76□□□□□ -1.49
SGF11YPL047W YBL029C-AQ3E756 94 aa5.69□□□□□ -1.5
SGF11YPL047W MST1P07236 462 aa5.68□□□□□ -1.5
SGF11YPL047W PTP3P40048 928 aa5.68□□□□□ -1.5
SGF11YPL047W YIL055CP40523 627 aaKnown RBP5.67□□□□□ -1.5
SGF11YPL047W YOR238WQ08634 303 aa5.66□□□□□ -1.5
SGF11YPL047W VNX1P42839 908 aa5.6□□□□□ -1.51
SGF11YPL047W NSR1P27476 414 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
SGF11YPL047W BBC1P47068 1157 aa5.58□□□□□ -1.52
SGF11YPL047W RSM7P47150 247 aa5.58□□□□□ -1.52
SGF11YPL047W AI2P03876 854 aa5.57□□□□□ -1.52
SGF11YPL047W YAP5P40574 245 aa5.55□□□□□ -1.52
SGF11YPL047W YAH1Q12184 172 aaKnown RBP5.55□□□□□ -1.52
SGF11YPL047W WSC3Q12215 556 aa5.55□□□□□ -1.52
SGF11YPL047W SPP1Q03012 353 aa5.54□□□□□ -1.52
SGF11YPL047W TIF11P38912 153 aaKnown RBP5.46□□□□□ -1.54
SGF11YPL047W GTT3P39996 337 aa5.46□□□□□ -1.54
SGF11YPL047W AIR2Q12476 344 aaKnown RBP5.46□□□□□ -1.54
SGF11YPL047W FKH1P40466 484 aa5.44□□□□□ -1.54
SGF11YPL047W YJL171CP46992 396 aa5.43□□□□□ -1.54
SGF11YPL047W YLR271WQ06152 274 aa5.42□□□□□ -1.54
SGF11YPL047W PIB1Q06651 286 aa5.42□□□□□ -1.54
SGF11YPL047W LDB19Q12502 818 aa5.39□□□□□ -1.55
SGF11YPL047W ULI1P43604 169 aa5.38□□□□□ -1.55
SGF11YPL047W PSD2P53037 1138 aaKnown RBP5.38□□□□□ -1.55
SGF11YPL047W IOC2Q12072 812 aa5.36□□□□□ -1.55
SGF11YPL047W MRM1P25270 412 aa5.35□□□□□ -1.55
SGF11YPL047W TFA1P36100 482 aa5.34□□□□□ -1.55
SGF11YPL047W BMT6Q12291 365 aa5.32□□□□□ -1.56
SGF11YPL047W MSB4Q12317 492 aa5.29□□□□□ -1.56
SGF11YPL047W SET4P42948 560 aa5.28□□□□□ -1.56
SGF11YPL047W EAP1P36041 632 aaKnown RBP5.27□□□□□ -1.57
SGF11YPL047W YOL036WQ08206 761 aa5.27□□□□□ -1.57
SGF11YPL047W RTG1P32607 177 aa5.26□□□□□ -1.57
SGF11YPL047W TRP5P00931 707 aaKnown RBP5.25□□□□□ -1.57
SGF11YPL047W DBP1P24784 617 aaKnown RBP5.24□□□□□ -1.57
SGF11YPL047W VPS29P38759 282 aa5.24□□□□□ -1.57
SGF11YPL047W SSP1P38871 571 aa5.24□□□□□ -1.57
SGF11YPL047W YFR006WP43590 535 aa5.24□□□□□ -1.57
SGF11YPL047W YMR1P47147 688 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
SGF11YPL047W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
SGF11YPL047W CST9Q06032 482 aa5.22□□□□□ -1.57
SGF11YPL047W NCR1Q12200 1170 aa5.22□□□□□ -1.57
SGF11YPL047W VMA1P17255 1071 aaKnown RBP5.2□□□□□ -1.58
SGF11YPL047W STS1P38637 319 aa5.2□□□□□ -1.58
SGF11YPL047W RTG3P38165 486 aa5.19□□□□□ -1.58
SGF11YPL047W YNL035CP53962 389 aaKnown RBP5.19□□□□□ -1.58
SGF11YPL047W SEC61P32915 480 aa5.17□□□□□ -1.58
SGF11YPL047W SAM3Q08986 587 aa5.17□□□□□ -1.58
SGF11YPL047W RCR1P38212 213 aa5.15□□□□□ -1.59
SGF11YPL047W MGA2P40578 1113 aa5.15□□□□□ -1.59
SGF11YPL047W TFG1P41895 735 aaPredicted RBP5.12□□□□□ -1.59
SGF11YPL047W SAP30P38429 201 aa5.11□□□□□ -1.59
SGF11YPL047W DAN4P47179 1161 aa5.1□□□□□ -1.59
SGF11YPL047W GYP5Q12344 894 aa5.09□□□□□ -1.59
SGF11YPL047W JIP4Q03361 876 aa5.08□□□□□ -1.6
SGF11YPL047W DCW1P36091 449 aa5.07□□□□□ -1.6
SGF11YPL047W HTA1P04911 132 aaKnown RBP5.06□□□□□ -1.6
SGF11YPL047W HTA2P04912 132 aa5.06□□□□□ -1.6
SGF11YPL047W YDL129WQ07555 291 aa5.06□□□□□ -1.6
SGF11YPL047W ABP1P15891 592 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms