RNA–Protein interactions for RNA: YPL035C

YPL035C, Transcript of Dubious open reading frame, yeastyeast

Gene YPL035C, Length 348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPL035CYPL035C MTC1P47018 478 aaKnown RBP12.21□□□□□ -0.45
YPL035CYPL035C FAP1P53971 965 aa11.36□□□□□ -0.59
YPL035CYPL035C DRS1P32892 752 aaKnown RBP11.32□□□□□ -0.6
YPL035CYPL035C PRY3P47033 881 aa10.7□□□□□ -0.7
YPL035CYPL035C PRI1P10363 409 aa10.51□□□□□ -0.73
YPL035CYPL035C AAD16Q02895 342 aa10.49□□□□□ -0.73
YPL035CYPL035C ISW2Q08773 1120 aa10.2□□□□□ -0.78
YPL035CYPL035C YCK3P39962 524 aa10.15□□□□□ -0.78
YPL035CYPL035C RPG1P38249 964 aaKnown RBP10.09□□□□□ -0.79
YPL035CYPL035C HAA1Q12753 694 aaKnown RBP10.06□□□□□ -0.8
YPL035CYPL035C DIP2Q12220 943 aaPredicted RBP9.94□□□□□ -0.82
YPL035CYPL035C TSR3Q12094 313 aaKnown RBP9.89□□□□□ -0.83
YPL035CYPL035C RSE1Q04693 1361 aaKnown RBP9.58□□□□□ -0.88
YPL035CYPL035C AVT3P36062 692 aa9.56□□□□□ -0.88
YPL035CYPL035C MRPL32P25348 183 aa9.51□□□□□ -0.89
YPL035CYPL035C BFR2Q06631 534 aaKnown RBP9.36□□□□□ -0.91
YPL035CYPL035C RPL17AP05740 184 aaKnown RBP9.33□□□□□ -0.92
YPL035CYPL035C RPL17BP46990 184 aaKnown RBP9.33□□□□□ -0.92
YPL035CYPL035C REB1P21538 810 aa9.27□□□□□ -0.93
YPL035CYPL035C YGL015CP33199 130 aa9.25□□□□□ -0.93
YPL035CYPL035C CDC27P38042 758 aa8.98□□□□□ -0.97
YPL035CYPL035C SPT21P35209 758 aa8.9□□□□□ -0.98
YPL035CYPL035C YKR023WP36119 530 aaKnown RBP8.87□□□□□ -0.99
YPL035CYPL035C UBP10P53874 792 aaPredicted RBP8.79□□□□□ -1
YPL035CYPL035C DCD1P06773 312 aa8.73□□□□□ -1.01
YPL035CYPL035C MAP2P38174 421 aaKnown RBP8.73□□□□□ -1.01
YPL035CYPL035C HOP09932 586 aa8.72□□□□□ -1.01
YPL035CYPL035C TFC8Q12308 588 aa8.69□□□□□ -1.02
YPL035CYPL035C BUD31P25337 157 aaPredicted RBP8.64□□□□□ -1.03
YPL035CYPL035C RIM101P33400 625 aa8.57□□□□□ -1.04
YPL035CYPL035C SCY1P53009 804 aa8.48□□□□□ -1.05
YPL035CYPL035C TIF4632P39936 914 aaKnown RBP8.42□□□□□ -1.06
YPL035CYPL035C TGL3P40308 642 aa8.42□□□□□ -1.06
YPL035CYPL035C SLX5P32828 619 aaKnown RBP8.41□□□□□ -1.06
YPL035CYPL035C BCH2P36122 765 aa8.39□□□□□ -1.07
YPL035CYPL035C OXP1P28273 1286 aa8.36□□□□□ -1.07
YPL035CYPL035C TFA1P36100 482 aa8.25□□□□□ -1.09
YPL035CYPL035C UBP9P39967 754 aa8.25□□□□□ -1.09
YPL035CYPL035C SIS1P25294 352 aaKnown RBP8.17□□□□□ -1.1
YPL035CYPL035C PTP3P40048 928 aa8.16□□□□□ -1.1
YPL035CYPL035C EPS1P40557 701 aa8.15□□□□□ -1.1
YPL035CYPL035C YIL055CP40523 627 aaKnown RBP8.14□□□□□ -1.11
YPL035CYPL035C BDF1P35817 686 aa8.13□□□□□ -1.11
YPL035CYPL035C YAH1Q12184 172 aaKnown RBP8.12□□□□□ -1.11
YPL035CYPL035C MST1P07236 462 aa8.04□□□□□ -1.12
YPL035CYPL035C RSM7P47150 247 aa8.03□□□□□ -1.12
YPL035CYPL035C AI2P03876 854 aa7.98□□□□□ -1.13
YPL035CYPL035C YOR238WQ08634 303 aa7.96□□□□□ -1.14
YPL035CYPL035C NSR1P27476 414 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
YPL035CYPL035C YLR271WQ06152 274 aa7.94□□□□□ -1.14
YPL035CYPL035C BBC1P47068 1157 aa7.93□□□□□ -1.14
YPL035CYPL035C YBL029C-AQ3E756 94 aa7.91□□□□□ -1.14
YPL035CYPL035C YAP5P40574 245 aa7.85□□□□□ -1.15
YPL035CYPL035C VNX1P42839 908 aa7.84□□□□□ -1.15
YPL035CYPL035C PSD2P53037 1138 aaKnown RBP7.78□□□□□ -1.16
YPL035CYPL035C SSP1P38871 571 aa7.77□□□□□ -1.17
YPL035CYPL035C SPP1Q03012 353 aa7.74□□□□□ -1.17
YPL035CYPL035C MRM1P25270 412 aa7.72□□□□□ -1.17
YPL035CYPL035C WSC3Q12215 556 aa7.72□□□□□ -1.17
YPL035CYPL035C CST9Q06032 482 aa7.69□□□□□ -1.18
YPL035CYPL035C PIB1Q06651 286 aa7.69□□□□□ -1.18
YPL035CYPL035C TIF11P38912 153 aaKnown RBP7.67□□□□□ -1.18
YPL035CYPL035C GTT3P39996 337 aa7.66□□□□□ -1.18
YPL035CYPL035C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.65□□□□□ -1.18not detected
YPL035CYPL035C AIR2Q12476 344 aaKnown RBP7.63□□□□□ -1.19
YPL035CYPL035C FKH1P40466 484 aa7.61□□□□□ -1.19
YPL035CYPL035C MGA2P40578 1113 aa7.56□□□□□ -1.2
YPL035CYPL035C VPS29P38759 282 aa7.55□□□□□ -1.2
YPL035CYPL035C ULI1P43604 169 aa7.55□□□□□ -1.2
YPL035CYPL035C YJL171CP46992 396 aa7.55□□□□□ -1.2
YPL035CYPL035C IOC2Q12072 812 aa7.55□□□□□ -1.2
YPL035CYPL035C RCR1P38212 213 aa7.54□□□□□ -1.2
YPL035CYPL035C LDB19Q12502 818 aa7.54□□□□□ -1.2
YPL035CYPL035C YFR006WP43590 535 aa7.53□□□□□ -1.2
YPL035CYPL035C RQC2Q12532 1038 aaKnown RBP7.53□□□□□ -1.2
YPL035CYPL035C MSB4Q12317 492 aa7.5□□□□□ -1.21
YPL035CYPL035C DBP1P24784 617 aaKnown RBP7.48□□□□□ -1.21
YPL035CYPL035C RTG3P38165 486 aa7.48□□□□□ -1.21
YPL035CYPL035C EAP1P36041 632 aaKnown RBP7.47□□□□□ -1.21
YPL035CYPL035C STS1P38637 319 aa7.47□□□□□ -1.21
YPL035CYPL035C YMR1P47147 688 aaKnown RBP RIP-Chip data7.46□□□□□ -1.22not detected
YPL035CYPL035C BMT6Q12291 365 aa7.44□□□□□ -1.22
YPL035CYPL035C YOL036WQ08206 761 aa7.43□□□□□ -1.22
YPL035CYPL035C SET4P42948 560 aa7.41□□□□□ -1.22
YPL035CYPL035C TRP5P00931 707 aaKnown RBP7.39□□□□□ -1.23
YPL035CYPL035C VMA1P17255 1071 aaKnown RBP7.38□□□□□ -1.23
YPL035CYPL035C RTG1P32607 177 aa7.38□□□□□ -1.23
YPL035CYPL035C SAM3Q08986 587 aa7.38□□□□□ -1.23
YPL035CYPL035C NCR1Q12200 1170 aa7.35□□□□□ -1.23
YPL035CYPL035C YNL035CP53962 389 aaKnown RBP7.34□□□□□ -1.23
YPL035CYPL035C SEC61P32915 480 aa7.33□□□□□ -1.24
YPL035CYPL035C RAM2P29703 316 aa7.25□□□□□ -1.25
YPL035CYPL035C ABP1P15891 592 aaKnown RBP7.24□□□□□ -1.25
YPL035CYPL035C DAN4P47179 1161 aa7.24□□□□□ -1.25
YPL035CYPL035C JIP4Q03361 876 aa7.23□□□□□ -1.25
YPL035CYPL035C GYP5Q12344 894 aa7.23□□□□□ -1.25
YPL035CYPL035C TFG1P41895 735 aaPredicted RBP7.22□□□□□ -1.25
YPL035CYPL035C DCW1P36091 449 aa7.2□□□□□ -1.26
YPL035CYPL035C HTA1P04911 132 aaKnown RBP7.18□□□□□ -1.26
YPL035CYPL035C HTA2P04912 132 aa7.18□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms