RNA–Protein interactions for RNA: YPL019C

VTC3, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC3, Length 2,508 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC3	YPL019C	FAP1	P53971	965 aa		5.88	□□□□□ -1.47
VTC3	YPL019C	DRS1	P32892	752 aa	Known RBP	5.75	□□□□□ -1.49
VTC3	YPL019C	PRY3	P47033	881 aa		5.58	□□□□□ -1.52
VTC3	YPL019C	MTC1	P47018	478 aa	Known RBP	5.56	□□□□□ -1.52
VTC3	YPL019C	INO80	P53115	1489 aa		5.22	□□□□□ -1.57
VTC3	YPL019C	MON2	P48563	1636 aa	Predicted RBP	5.21	□□□□□ -1.57
VTC3	YPL019C	YCK3	P39962	524 aa		5.21	□□□□□ -1.58
VTC3	YPL019C	HAA1	Q12753	694 aa	Known RBP	5.18	□□□□□ -1.58
VTC3	YPL019C	BFR2	Q06631	534 aa	Known RBP	5.03	□□□□□ -1.6
VTC3	YPL019C	AAD16	Q02895	342 aa		5	□□□□□ -1.61
VTC3	YPL019C	DNA2	P38859	1522 aa		4.96	□□□□□ -1.62
VTC3	YPL019C	SWR1	Q05471	1514 aa		4.93	□□□□□ -1.62
VTC3	YPL019C	TFA1	P36100	482 aa		4.92	□□□□□ -1.62
VTC3	YPL019C	KOG1	P38873	1557 aa		4.9	□□□□□ -1.62
VTC3	YPL019C	AVT3	P36062	692 aa		4.89	□□□□□ -1.63
VTC3	YPL019C	TCB3	Q03640	1545 aa	Known RBP	4.88	□□□□□ -1.63
VTC3	YPL019C	TY1B-DR4	Q07793	1604 aa		4.85	□□□□□ -1.63
VTC3	YPL019C	PRI1	P10363	409 aa		4.85	□□□□□ -1.63
VTC3	YPL019C	RSE1	Q04693	1361 aa	Known RBP	4.85	□□□□□ -1.63
VTC3	YPL019C	DIP2	Q12220	943 aa	Predicted RBP	4.84	□□□□□ -1.63
VTC3	YPL019C	BUD31	P25337	157 aa	Predicted RBP	4.8	□□□□□ -1.64
VTC3	YPL019C	SGS1	P35187	1447 aa		4.75	□□□□□ -1.65
VTC3	YPL019C	SPT6	P23615	1451 aa	Known RBP	4.67	□□□□□ -1.66
VTC3	YPL019C	HSL1	P34244	1518 aa		4.67	□□□□□ -1.66
VTC3	YPL019C	SPA2	P23201	1466 aa	Known RBP	4.64	□□□□□ -1.67
VTC3	YPL019C	ECM5	Q03214	1411 aa		4.61	□□□□□ -1.67
VTC3	YPL019C	BUD4	P47136	1447 aa		4.57	□□□□□ -1.68
VTC3	YPL019C	THO2	P53552	1597 aa	Known RBP	4.57	□□□□□ -1.68
VTC3	YPL019C	HIR3	P47171	1648 aa		4.56	□□□□□ -1.68
VTC3	YPL019C	YGL015C	P33199	130 aa		4.54	□□□□□ -1.68
VTC3	YPL019C	MDS3	P53094	1487 aa		4.52	□□□□□ -1.69
VTC3	YPL019C	SIS1	P25294	352 aa	Known RBP	4.51	□□□□□ -1.69
VTC3	YPL019C	TSR3	Q12094	313 aa	Known RBP	4.51	□□□□□ -1.69
VTC3	YPL019C	XRN1	P22147	1528 aa	Known RBP	4.48	□□□□□ -1.69
VTC3	YPL019C	REV3	P14284	1504 aa		4.46	□□□□□ -1.7
VTC3	YPL019C	PEP1	P32319	1579 aa		4.46	□□□□□ -1.7
VTC3	YPL019C	BPT1	P14772	1559 aa		4.42	□□□□□ -1.7
VTC3	YPL019C	ATG2	P53855	1592 aa		4.42	□□□□□ -1.7
VTC3	YPL019C	ISW2	Q08773	1120 aa		4.41	□□□□□ -1.7
VTC3	YPL019C	RPG1	P38249	964 aa	Known RBP	4.4	□□□□□ -1.7
VTC3	YPL019C	MRPL32	P25348	183 aa		4.36	□□□□□ -1.71
VTC3	YPL019C	SKI3	P17883	1432 aa	Known RBP	4.36	□□□□□ -1.71
VTC3	YPL019C	SSK2	P53599	1579 aa		4.34	□□□□□ -1.71
VTC3	YPL019C	YCF1	P39109	1515 aa	Known RBP	4.34	□□□□□ -1.71
VTC3	YPL019C	TAF2	P23255	1407 aa		4.33	□□□□□ -1.72
VTC3	YPL019C	SIN3	P22579	1536 aa		4.33	□□□□□ -1.72
VTC3	YPL019C	SSN2	P38931	1420 aa		4.32	□□□□□ -1.72
VTC3	YPL019C	RPL17A	P05740	184 aa	Known RBP	4.32	□□□□□ -1.72
VTC3	YPL019C	RPL17B	P46990	184 aa	Known RBP	4.32	□□□□□ -1.72
VTC3	YPL019C	UFD4	P33202	1483 aa		4.28	□□□□□ -1.72
VTC3	YPL019C	ESP1	Q03018	1630 aa		4.27	□□□□□ -1.73
VTC3	YPL019C	MIF2	P35201	549 aa		4.27	□□□□□ -1.73
VTC3	YPL019C	SPT21	P35209	758 aa		4.26	□□□□□ -1.73
VTC3	YPL019C	MET5	P47169	1442 aa		4.25	□□□□□ -1.73
VTC3	YPL019C	YPK9	Q12697	1472 aa		4.23	□□□□□ -1.73
VTC3	YPL019C	CHD1	P32657	1468 aa		4.23	□□□□□ -1.73
VTC3	YPL019C	SCC2	Q04002	1493 aa		4.23	□□□□□ -1.73
VTC3	YPL019C	CDC25	P04821	1589 aa		4.22	□□□□□ -1.73
VTC3	YPL019C	MYO2	P19524	1574 aa	Known RBP	4.22	□□□□□ -1.73
VTC3	YPL019C	RIM101	P33400	625 aa		4.22	□□□□□ -1.73
VTC3	YPL019C	LTE1	P07866	1435 aa		4.22	□□□□□ -1.73
VTC3	YPL019C	RPO31	P04051	1460 aa		4.21	□□□□□ -1.74
VTC3	YPL019C	ESC1	Q03661	1658 aa	Known RBP	4.2	□□□□□ -1.74
VTC3	YPL019C	RQC2	Q12532	1038 aa	Known RBP	4.2	□□□□□ -1.74
VTC3	YPL019C	DNF1	P32660	1571 aa		4.2	□□□□□ -1.74
VTC3	YPL019C	REB1	P21538	810 aa		4.2	□□□□□ -1.74
VTC3	YPL019C	PAN1	P32521	1480 aa		4.18	□□□□□ -1.74
VTC3	YPL019C	RKR1	Q04781	1562 aa		4.18	□□□□□ -1.74
VTC3	YPL019C	TY2B-LR1	P0C2J3	1770 aa		4.17	□□□□□ -1.74
VTC3	YPL019C	TY2B-F	P0CX63	1770 aa		4.17	□□□□□ -1.74
VTC3	YPL019C	TY2B-GR2	P0CX64	1770 aa		4.17	□□□□□ -1.74
VTC3	YPL019C	TY2B-C	P25384	1770 aa		4.17	□□□□□ -1.74
VTC3	YPL019C	TY2B-DR2	Q03494	1770 aa		4.17	□□□□□ -1.74
VTC3	YPL019C	TY1B-DR1	Q03855	1755 aa		4.17	□□□□□ -1.74
VTC3	YPL019C	TY2B-DR3	Q07791	1770 aa	Known RBP	4.17	□□□□□ -1.74
VTC3	YPL019C	TY2B-OR1	Q12113	1770 aa		4.17	□□□□□ -1.74
VTC3	YPL019C	TY2B-DR1	Q12472	1770 aa		4.17	□□□□□ -1.74
VTC3	YPL019C	TY2B-OR2	Q12501	1770 aa		4.17	□□□□□ -1.74
VTC3	YPL019C	RPA190	P10964	1664 aa	Known RBP	4.17	□□□□□ -1.74
VTC3	YPL019C	TY1B-BR	Q12193	1756 aa		4.17	□□□□□ -1.74
VTC3	YPL019C	TY1B-GR3	Q12316	1755 aa		4.17	□□□□□ -1.74
VTC3	YPL019C	TY1B-OR	Q92393	1755 aa		4.17	□□□□□ -1.74
VTC3	YPL019C	GEA2	P39993	1459 aa	Known RBP	4.16	□□□□□ -1.74
VTC3	YPL019C	BNI1	P41832	1953 aa		4.16	□□□□□ -1.74
VTC3	YPL019C	PTP3	P40048	928 aa		4.14	□□□□□ -1.75
VTC3	YPL019C	ITT1	Q04638	464 aa		4.14	□□□□□ -1.75
VTC3	YPL019C	TOP2	P06786	1428 aa	Known RBP	4.14	□□□□□ -1.75
VTC3	YPL019C	ABP1	P15891	592 aa	Known RBP	4.14	□□□□□ -1.75
VTC3	YPL019C	OXP1	P28273	1286 aa		4.13	□□□□□ -1.75
VTC3	YPL019C	TY1B-H	O13535	1793 aa		4.12	□□□□□ -1.75
VTC3	YPL019C	TY1B-DR5	P0C2I2	1755 aa		4.12	□□□□□ -1.75
VTC3	YPL019C	TY1B-DR6	P0C2I3	1755 aa		4.12	□□□□□ -1.75
VTC3	YPL019C	TY1B-LR2	P0C2I5	1755 aa		4.12	□□□□□ -1.75
VTC3	YPL019C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.12	□□□□□ -1.75
VTC3	YPL019C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.12	□□□□□ -1.75
VTC3	YPL019C	TY1B-PR2	P0C2J0	1756 aa		4.12	□□□□□ -1.75
VTC3	YPL019C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.12	□□□□□ -1.75
VTC3	YPL019C	DMA1	P38823	416 aa		4.12	□□□□□ -1.75
VTC3	YPL019C	TY1B-JR1	P47098	1755 aa		4.12	□□□□□ -1.75
VTC3	YPL019C	TY1B-ML2	Q03434	1755 aa	Known RBP	4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms