RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeastyeast

Gene CAF20, Length 486 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF20YOR276W FAP1P53971 965 aa13.46□□□□□ -0.25
CAF20YOR276W MTC1P47018 478 aaKnown RBP13.4□□□□□ -0.26
CAF20YOR276W PRY3P47033 881 aa12.79□□□□□ -0.36
CAF20YOR276W DRS1P32892 752 aaKnown RBP12.46□□□□□ -0.41
CAF20YOR276W YCK3P39962 524 aa12.14□□□□□ -0.47
CAF20YOR276W HAA1Q12753 694 aaKnown RBP11.72□□□□□ -0.53
CAF20YOR276W AAD16Q02895 342 aa11.59□□□□□ -0.55
CAF20YOR276W PRI1P10363 409 aa11.38□□□□□ -0.59
CAF20YOR276W ISW2Q08773 1120 aa11.11□□□□□ -0.63
CAF20YOR276W RPG1P38249 964 aaKnown RBP10.97□□□□□ -0.65
CAF20YOR276W DIP2Q12220 943 aaPredicted RBP10.95□□□□□ -0.66
CAF20YOR276W TSR3Q12094 313 aaKnown RBP10.71□□□□□ -0.69
CAF20YOR276W BUD31P25337 157 aaPredicted RBP10.65□□□□□ -0.7
CAF20YOR276W RSE1Q04693 1361 aaKnown RBP10.6□□□□□ -0.71
CAF20YOR276W AVT3P36062 692 aa10.57□□□□□ -0.72
CAF20YOR276W YGL015CP33199 130 aa10.38□□□□□ -0.75
CAF20YOR276W BFR2Q06631 534 aaKnown RBP10.34□□□□□ -0.75
CAF20YOR276W MRPL32P25348 183 aa10.26□□□□□ -0.77
CAF20YOR276W RPL17AP05740 184 aaKnown RBP10.24□□□□□ -0.77
CAF20YOR276W RPL17BP46990 184 aaKnown RBP10.24□□□□□ -0.77
CAF20YOR276W REB1P21538 810 aa10.2□□□□□ -0.78
CAF20YOR276W SIS1P25294 352 aaKnown RBP9.89□□□□□ -0.83
CAF20YOR276W SPT21P35209 758 aa9.84□□□□□ -0.83
CAF20YOR276W CDC27P38042 758 aa9.75□□□□□ -0.85
CAF20YOR276W YKR023WP36119 530 aaKnown RBP9.72□□□□□ -0.85
CAF20YOR276W TFC8Q12308 588 aa9.53□□□□□ -0.88
CAF20YOR276W HOP09932 586 aa9.5□□□□□ -0.89
CAF20YOR276W UBP10P53874 792 aaPredicted RBP9.5□□□□□ -0.89
CAF20YOR276W RIM101P33400 625 aa9.48□□□□□ -0.89
CAF20YOR276W DCD1P06773 312 aa9.45□□□□□ -0.9
CAF20YOR276W MAP2P38174 421 aaKnown RBP9.44□□□□□ -0.9
CAF20YOR276W UBP9P39967 754 aa9.28□□□□□ -0.92
CAF20YOR276W SCY1P53009 804 aa9.25□□□□□ -0.93
CAF20YOR276W BCH2P36122 765 aa9.21□□□□□ -0.94
CAF20YOR276W OXP1P28273 1286 aa9.16□□□□□ -0.94
CAF20YOR276W SLX5P32828 619 aaKnown RBP9.14□□□□□ -0.95
CAF20YOR276W TFA1P36100 482 aa9.11□□□□□ -0.95
CAF20YOR276W TIF4632P39936 914 aaKnown RBP9.1□□□□□ -0.95
CAF20YOR276W TGL3P40308 642 aa9.07□□□□□ -0.96
CAF20YOR276W YIL055CP40523 627 aaKnown RBP9□□□□□ -0.97
CAF20YOR276W PTP3P40048 928 aa8.99□□□□□ -0.97
CAF20YOR276W EPS1P40557 701 aa8.97□□□□□ -0.97
CAF20YOR276W BDF1P35817 686 aa8.94□□□□□ -0.98
CAF20YOR276W RSM7P47150 247 aa8.89□□□□□ -0.99
CAF20YOR276W YAH1Q12184 172 aaKnown RBP8.84□□□□□ -0.99
CAF20YOR276W BBC1P47068 1157 aa8.82□□□□□ -1
CAF20YOR276W AI2P03876 854 aa8.8□□□□□ -1
CAF20YOR276W YLR271WQ06152 274 aa8.74□□□□□ -1.01
CAF20YOR276W MST1P07236 462 aa8.71□□□□□ -1.02
CAF20YOR276W NSR1P27476 414 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
CAF20YOR276W YOR238WQ08634 303 aa8.66□□□□□ -1.02
CAF20YOR276W PSD2P53037 1138 aaKnown RBP8.63□□□□□ -1.03
CAF20YOR276W SSP1P38871 571 aa8.61□□□□□ -1.03
CAF20YOR276W YAP5P40574 245 aa8.6□□□□□ -1.03
CAF20YOR276W YBL029C-AQ3E756 94 aa8.59□□□□□ -1.03
CAF20YOR276W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.57□□□□□ -1.04not detected
CAF20YOR276W MRM1P25270 412 aa8.48□□□□□ -1.05
CAF20YOR276W VNX1P42839 908 aa8.45□□□□□ -1.06
CAF20YOR276W MGA2P40578 1113 aa8.43□□□□□ -1.06
CAF20YOR276W CST9Q06032 482 aa8.41□□□□□ -1.06
CAF20YOR276W GTT3P39996 337 aa8.38□□□□□ -1.07
CAF20YOR276W WSC3Q12215 556 aa8.38□□□□□ -1.07
CAF20YOR276W AIR2Q12476 344 aaKnown RBP8.38□□□□□ -1.07
CAF20YOR276W SPP1Q03012 353 aa8.37□□□□□ -1.07
CAF20YOR276W PIB1Q06651 286 aa8.34□□□□□ -1.07
CAF20YOR276W YJL171CP46992 396 aa8.32□□□□□ -1.08
CAF20YOR276W RTG3P38165 486 aa8.31□□□□□ -1.08
CAF20YOR276W VPS29P38759 282 aa8.31□□□□□ -1.08
CAF20YOR276W TIF11P38912 153 aaKnown RBP8.31□□□□□ -1.08
CAF20YOR276W YMR1P47147 688 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
CAF20YOR276W DBP1P24784 617 aaKnown RBP8.25□□□□□ -1.09
CAF20YOR276W STS1P38637 319 aa8.23□□□□□ -1.09
CAF20YOR276W RCR1P38212 213 aa8.22□□□□□ -1.09
CAF20YOR276W FKH1P40466 484 aa8.22□□□□□ -1.09
CAF20YOR276W MSB4Q12317 492 aa8.22□□□□□ -1.09
CAF20YOR276W YFR006WP43590 535 aa8.21□□□□□ -1.1
CAF20YOR276W ULI1P43604 169 aa8.2□□□□□ -1.1
CAF20YOR276W RQC2Q12532 1038 aaKnown RBP8.2□□□□□ -1.1
CAF20YOR276W RGA2Q06407 1009 aa8.19□□□□□ -1.1
CAF20YOR276W IOC2Q12072 812 aa8.19□□□□□ -1.1
CAF20YOR276W VMA1P17255 1071 aaKnown RBP8.18□□□□□ -1.1
CAF20YOR276W YOL036WQ08206 761 aa8.17□□□□□ -1.1
CAF20YOR276W EAP1P36041 632 aaKnown RBP8.16□□□□□ -1.1
CAF20YOR276W LDB19Q12502 818 aa8.16□□□□□ -1.1
CAF20YOR276W SAM3Q08986 587 aa8.15□□□□□ -1.1
CAF20YOR276W SET4P42948 560 aa8.14□□□□□ -1.11
CAF20YOR276W TRP5P00931 707 aaKnown RBP8.09□□□□□ -1.11
CAF20YOR276W RTG1P32607 177 aa8.03□□□□□ -1.12
CAF20YOR276W ABP1P15891 592 aaKnown RBP8.02□□□□□ -1.13
CAF20YOR276W YNL035CP53962 389 aaKnown RBP8.02□□□□□ -1.13
CAF20YOR276W BMT6Q12291 365 aa8.01□□□□□ -1.13
CAF20YOR276W GYP5Q12344 894 aa8.01□□□□□ -1.13
CAF20YOR276W RAM2P29703 316 aa7.99□□□□□ -1.13
CAF20YOR276W SEC61P32915 480 aa7.99□□□□□ -1.13
CAF20YOR276W NCR1Q12200 1170 aa7.98□□□□□ -1.13
CAF20YOR276W MAK11P20484 414 aaKnown RBP7.97□□□□□ -1.13
CAF20YOR276W HTA1P04911 132 aaKnown RBP7.94□□□□□ -1.14
CAF20YOR276W HTA2P04912 132 aa7.94□□□□□ -1.14
CAF20YOR276W DAN4P47179 1161 aa7.94□□□□□ -1.14
CAF20YOR276W JIP4Q03361 876 aa7.94□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms