RNA–Protein interactions for RNA: YOR205C

GEP3, Transcript of Protein required for mitochondrial ribosome small subunit biogenesis, yeastyeast

Gene GEP3, Length 1,671 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEP3YOR205C FAP1P53971 965 aa10.83□□□□□ -0.68
GEP3YOR205C PRY3P47033 881 aa10.23□□□□□ -0.77
GEP3YOR205C MTC1P47018 478 aaKnown RBP9.83□□□□□ -0.84
GEP3YOR205C SGS1P35187 1447 aa9.78□□□□□ -0.84
GEP3YOR205C INO80P53115 1489 aa9.67□□□□□ -0.86
GEP3YOR205C TCB3Q03640 1545 aaKnown RBP9.6□□□□□ -0.87
GEP3YOR205C MON2P48563 1636 aaPredicted RBP9.57□□□□□ -0.88
GEP3YOR205C HAA1Q12753 694 aaKnown RBP9.47□□□□□ -0.89
GEP3YOR205C YCK3P39962 524 aa9.45□□□□□ -0.9
GEP3YOR205C TY1B-DR4Q07793 1604 aa9.44□□□□□ -0.9
GEP3YOR205C AAD16Q02895 342 aa9.42□□□□□ -0.9
GEP3YOR205C SWR1Q05471 1514 aa9.33□□□□□ -0.92
GEP3YOR205C HSL1P34244 1518 aa9.27□□□□□ -0.93
GEP3YOR205C SPA2P23201 1466 aaKnown RBP9.26□□□□□ -0.93
GEP3YOR205C SPT6P23615 1451 aaKnown RBP9.26□□□□□ -0.93
GEP3YOR205C SSN2P38931 1420 aa9.26□□□□□ -0.93
GEP3YOR205C PRI1P10363 409 aa9.21□□□□□ -0.93
GEP3YOR205C DNA2P38859 1522 aa9.12□□□□□ -0.95
GEP3YOR205C KOG1P38873 1557 aa9.1□□□□□ -0.95
GEP3YOR205C HIR3P47171 1648 aa9.08□□□□□ -0.96
GEP3YOR205C XRN1P22147 1528 aaKnown RBP9.02□□□□□ -0.97
GEP3YOR205C DRS1P32892 752 aaKnown RBP9.01□□□□□ -0.97
GEP3YOR205C REV3P14284 1504 aa8.89□□□□□ -0.99
GEP3YOR205C BUD4P47136 1447 aa8.87□□□□□ -0.99
GEP3YOR205C THO2P53552 1597 aaKnown RBP8.87□□□□□ -0.99
GEP3YOR205C ECM5Q03214 1411 aa8.83□□□□□ -1
GEP3YOR205C SIN3P22579 1536 aa8.81□□□□□ -1
GEP3YOR205C TAF2P23255 1407 aa8.78□□□□□ -1
GEP3YOR205C SSK2P53599 1579 aa8.74□□□□□ -1.01
GEP3YOR205C MDS3P53094 1487 aa8.72□□□□□ -1.01
GEP3YOR205C ATG2P53855 1592 aa8.7□□□□□ -1.02
GEP3YOR205C SKI3P17883 1432 aaKnown RBP8.69□□□□□ -1.02
GEP3YOR205C MYO2P19524 1574 aaKnown RBP8.67□□□□□ -1.02
GEP3YOR205C TSR3Q12094 313 aaKnown RBP8.67□□□□□ -1.02
GEP3YOR205C ESP1Q03018 1630 aa8.67□□□□□ -1.02
GEP3YOR205C PEP1P32319 1579 aa8.63□□□□□ -1.03
GEP3YOR205C RSE1Q04693 1361 aaKnown RBP8.57□□□□□ -1.04
GEP3YOR205C YPK9Q12697 1472 aa8.57□□□□□ -1.04
GEP3YOR205C ISW2Q08773 1120 aa8.56□□□□□ -1.04
GEP3YOR205C RPG1P38249 964 aaKnown RBP8.52□□□□□ -1.05
GEP3YOR205C SCC2Q04002 1493 aa8.5□□□□□ -1.05
GEP3YOR205C POL1P13382 1468 aa8.47□□□□□ -1.05
GEP3YOR205C UFD4P33202 1483 aa8.47□□□□□ -1.05
GEP3YOR205C YGL015CP33199 130 aa8.46□□□□□ -1.05
GEP3YOR205C RPO31P04051 1460 aa8.46□□□□□ -1.06
GEP3YOR205C BPT1P14772 1559 aa8.45□□□□□ -1.06
GEP3YOR205C BUD31P25337 157 aaPredicted RBP8.45□□□□□ -1.06
GEP3YOR205C STU1P38198 1513 aa8.43□□□□□ -1.06
GEP3YOR205C RKR1Q04781 1562 aa8.42□□□□□ -1.06
GEP3YOR205C TOP2P06786 1428 aaKnown RBP8.39□□□□□ -1.07
GEP3YOR205C YCF1P39109 1515 aaKnown RBP8.38□□□□□ -1.07
GEP3YOR205C MRPL32P25348 183 aa8.37□□□□□ -1.07
GEP3YOR205C YOR1P53049 1477 aa8.37□□□□□ -1.07
GEP3YOR205C YTA7P40340 1379 aa8.36□□□□□ -1.07
GEP3YOR205C SMC4Q12267 1418 aa8.34□□□□□ -1.07
GEP3YOR205C RQC2Q12532 1038 aaKnown RBP8.34□□□□□ -1.08
GEP3YOR205C TY2B-LR1P0C2J3 1770 aa8.3□□□□□ -1.08
GEP3YOR205C TY2B-FP0CX63 1770 aa8.3□□□□□ -1.08
GEP3YOR205C TY2B-GR2P0CX64 1770 aa8.3□□□□□ -1.08
GEP3YOR205C TY2B-CP25384 1770 aa8.3□□□□□ -1.08
GEP3YOR205C TY2B-DR2Q03494 1770 aa8.3□□□□□ -1.08
GEP3YOR205C TY1B-DR1Q03855 1755 aa8.3□□□□□ -1.08
GEP3YOR205C TY2B-DR3Q07791 1770 aaKnown RBP8.3□□□□□ -1.08
GEP3YOR205C TY2B-OR1Q12113 1770 aa8.3□□□□□ -1.08
GEP3YOR205C TY2B-DR1Q12472 1770 aa8.3□□□□□ -1.08
GEP3YOR205C TY2B-OR2Q12501 1770 aa8.3□□□□□ -1.08
GEP3YOR205C MYO4P32492 1471 aa8.28□□□□□ -1.08
GEP3YOR205C CHD1P32657 1468 aa8.28□□□□□ -1.08
GEP3YOR205C CDC25P04821 1589 aa8.27□□□□□ -1.09
GEP3YOR205C MMS22Q06164 1454 aa8.25□□□□□ -1.09
GEP3YOR205C TY1B-DR3Q99231 1755 aa8.23□□□□□ -1.09
GEP3YOR205C TY2B-BQ12491 1770 aa8.22□□□□□ -1.09
GEP3YOR205C SPP41P38904 1435 aa8.22□□□□□ -1.09
GEP3YOR205C PAN1P32521 1480 aa8.22□□□□□ -1.09
GEP3YOR205C SAS10Q12136 610 aaPredicted RBP8.21□□□□□ -1.1
GEP3YOR205C TY1B-BRQ12193 1756 aa8.2□□□□□ -1.1
GEP3YOR205C TY1B-GR3Q12316 1755 aa8.2□□□□□ -1.1
GEP3YOR205C TY1B-ORQ92393 1755 aa8.2□□□□□ -1.1
GEP3YOR205C ESC1Q03661 1658 aaKnown RBP8.18□□□□□ -1.1
GEP3YOR205C TY1B-HO13535 1793 aa8.17□□□□□ -1.1
GEP3YOR205C TY1B-DR5P0C2I2 1755 aa8.17□□□□□ -1.1
GEP3YOR205C TY1B-DR6P0C2I3 1755 aa8.17□□□□□ -1.1
GEP3YOR205C TY1B-LR2P0C2I5 1755 aa8.17□□□□□ -1.1
GEP3YOR205C TY1B-LR3P0C2I6 1755 aaKnown RBP8.17□□□□□ -1.1
GEP3YOR205C TY1B-PR1P0C2I9 1755 aaKnown RBP8.17□□□□□ -1.1
GEP3YOR205C TY1B-PR2P0C2J0 1756 aa8.17□□□□□ -1.1
GEP3YOR205C TY1B-PR3P0C2J1 1755 aaKnown RBP8.17□□□□□ -1.1
GEP3YOR205C TY1B-JR1P47098 1755 aa8.17□□□□□ -1.1
GEP3YOR205C TY1B-ML2Q03434 1755 aaKnown RBP8.17□□□□□ -1.1
GEP3YOR205C TY1B-ER1Q03612 1755 aa8.17□□□□□ -1.1
GEP3YOR205C TY1B-ML1Q04711 1755 aaKnown RBP8.17□□□□□ -1.1
GEP3YOR205C TY1B-GR2Q12269 1755 aa8.17□□□□□ -1.1
GEP3YOR205C TY1B-OLQ12273 1755 aa8.17□□□□□ -1.1
GEP3YOR205C TY1B-PLQ12414 1755 aaKnown RBP8.17□□□□□ -1.1
GEP3YOR205C TRM732Q03496 1420 aa8.17□□□□□ -1.1
GEP3YOR205C TSC11P40061 1430 aa8.15□□□□□ -1.1
GEP3YOR205C TAF7Q05021 590 aa8.15□□□□□ -1.1
GEP3YOR205C SNQ2P32568 1501 aaKnown RBP8.15□□□□□ -1.11
GEP3YOR205C VTH1P40438 1549 aa8.15□□□□□ -1.11
GEP3YOR205C VTH2P40890 1549 aa8.15□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms