RNA–Protein interactions for RNA: YOR193W

PEX27, Transcript of Peripheral peroxisomal membrane protein, yeastyeast

Gene PEX27, Length 1,131 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX27YOR193W MTC1P47018 478 aaKnown RBP20.34■□□□□ 0.85
PEX27YOR193W DRS1P32892 752 aaKnown RBP18.79■□□□□ 0.6
PEX27YOR193W FAP1P53971 965 aa18.42■□□□□ 0.54
PEX27YOR193W PRY3P47033 881 aa17.33■□□□□ 0.36
PEX27YOR193W PRI1P10363 409 aa17.25■□□□□ 0.35
PEX27YOR193W AAD16Q02895 342 aa17.15■□□□□ 0.34
PEX27YOR193W ISW2Q08773 1120 aa16.86■□□□□ 0.29
PEX27YOR193W RPG1P38249 964 aaKnown RBP16.7■□□□□ 0.26
PEX27YOR193W DIP2Q12220 943 aaPredicted RBP16.55■□□□□ 0.24
PEX27YOR193W YCK3P39962 524 aa16.48■□□□□ 0.23
PEX27YOR193W HAA1Q12753 694 aaKnown RBP16.29■□□□□ 0.2
PEX27YOR193W TSR3Q12094 313 aaKnown RBP16.27■□□□□ 0.2
PEX27YOR193W RSE1Q04693 1361 aaKnown RBP16.05■□□□□ 0.16
PEX27YOR193W AVT3P36062 692 aa15.95■□□□□ 0.14
PEX27YOR193W MRPL32P25348 183 aa15.62■□□□□ 0.09
PEX27YOR193W RPL17AP05740 184 aaKnown RBP15.54■□□□□ 0.08
PEX27YOR193W RPL17BP46990 184 aaKnown RBP15.54■□□□□ 0.08
PEX27YOR193W BFR2Q06631 534 aaKnown RBP15.53■□□□□ 0.08
PEX27YOR193W REB1P21538 810 aa15.46■□□□□ 0.07
PEX27YOR193W YGL015CP33199 130 aa15.04■□□□□ -0
PEX27YOR193W SPT21P35209 758 aa14.92□□□□□ -0.02
PEX27YOR193W CDC27P38042 758 aa14.86□□□□□ -0.03
PEX27YOR193W YKR023WP36119 530 aaKnown RBP14.79□□□□□ -0.04
PEX27YOR193W TFC8Q12308 588 aa14.47□□□□□ -0.09
PEX27YOR193W UBP10P53874 792 aaPredicted RBP14.45□□□□□ -0.1
PEX27YOR193W HOP09932 586 aa14.44□□□□□ -0.1
PEX27YOR193W MAP2P38174 421 aaKnown RBP14.4□□□□□ -0.1
PEX27YOR193W DCD1P06773 312 aa14.38□□□□□ -0.11
PEX27YOR193W RIM101P33400 625 aa14.36□□□□□ -0.11
PEX27YOR193W SCY1P53009 804 aa14.06□□□□□ -0.16
PEX27YOR193W BCH2P36122 765 aa13.98□□□□□ -0.17
PEX27YOR193W SLX5P32828 619 aaKnown RBP13.89□□□□□ -0.19
PEX27YOR193W BUD31P25337 157 aaPredicted RBP13.88□□□□□ -0.19
PEX27YOR193W OXP1P28273 1286 aa13.87□□□□□ -0.19
PEX27YOR193W TIF4632P39936 914 aaKnown RBP13.81□□□□□ -0.2
PEX27YOR193W TGL3P40308 642 aa13.8□□□□□ -0.2
PEX27YOR193W EPS1P40557 701 aa13.62□□□□□ -0.23
PEX27YOR193W PTP3P40048 928 aa13.59□□□□□ -0.23
PEX27YOR193W YIL055CP40523 627 aaKnown RBP13.59□□□□□ -0.23
PEX27YOR193W BDF1P35817 686 aa13.57□□□□□ -0.24
PEX27YOR193W TFA1P36100 482 aa13.56□□□□□ -0.24
PEX27YOR193W RSM7P47150 247 aa13.44□□□□□ -0.26
PEX27YOR193W UBP9P39967 754 aa13.39□□□□□ -0.27
PEX27YOR193W YAH1Q12184 172 aaKnown RBP13.37□□□□□ -0.27
PEX27YOR193W AI2P03876 854 aa13.32□□□□□ -0.28
PEX27YOR193W BBC1P47068 1157 aa13.31□□□□□ -0.28
PEX27YOR193W MST1P07236 462 aa13.23□□□□□ -0.29
PEX27YOR193W YLR271WQ06152 274 aa13.19□□□□□ -0.3
PEX27YOR193W NSR1P27476 414 aaKnown RBP RIP-Chip data13.17□□□□□ -0.3not detected
PEX27YOR193W SIS1P25294 352 aaKnown RBP13.16□□□□□ -0.3
PEX27YOR193W YOR238WQ08634 303 aa13.14□□□□□ -0.31
PEX27YOR193W YAP5P40574 245 aa13.03□□□□□ -0.32
PEX27YOR193W PSD2P53037 1138 aaKnown RBP13.03□□□□□ -0.32
PEX27YOR193W YBL029C-AQ3E756 94 aa12.99□□□□□ -0.33
PEX27YOR193W SSP1P38871 571 aa12.97□□□□□ -0.33
PEX27YOR193W VNX1P42839 908 aa12.87□□□□□ -0.35
PEX27YOR193W ARP8Q12386 881 aaKnown RBP RIP-Chip data12.87□□□□□ -0.35not detected
PEX27YOR193W MRM1P25270 412 aa12.83□□□□□ -0.36
PEX27YOR193W WSC3Q12215 556 aa12.76□□□□□ -0.37
PEX27YOR193W SPP1Q03012 353 aa12.72□□□□□ -0.37
PEX27YOR193W GTT3P39996 337 aa12.71□□□□□ -0.37
PEX27YOR193W CST9Q06032 482 aa12.71□□□□□ -0.37
PEX27YOR193W PIB1Q06651 286 aa12.68□□□□□ -0.38
PEX27YOR193W MGA2P40578 1113 aa12.67□□□□□ -0.38
PEX27YOR193W TIF11P38912 153 aaKnown RBP12.63□□□□□ -0.39
PEX27YOR193W VPS29P38759 282 aa12.59□□□□□ -0.39
PEX27YOR193W RTG3P38165 486 aa12.55□□□□□ -0.4
PEX27YOR193W YMR1P47147 688 aaKnown RBP RIP-Chip data12.55□□□□□ -0.4not detected
PEX27YOR193W DBP1P24784 617 aaKnown RBP12.49□□□□□ -0.41
PEX27YOR193W AIR2Q12476 344 aaKnown RBP12.49□□□□□ -0.41
PEX27YOR193W FKH1P40466 484 aa12.48□□□□□ -0.41
PEX27YOR193W IOC2Q12072 812 aa12.47□□□□□ -0.41
PEX27YOR193W ULI1P43604 169 aa12.46□□□□□ -0.41
PEX27YOR193W STS1P38637 319 aa12.45□□□□□ -0.42
PEX27YOR193W MSB4Q12317 492 aa12.45□□□□□ -0.42
PEX27YOR193W YFR006WP43590 535 aa12.44□□□□□ -0.42
PEX27YOR193W RCR1P38212 213 aa12.43□□□□□ -0.42
PEX27YOR193W LDB19Q12502 818 aa12.42□□□□□ -0.42
PEX27YOR193W YOL036WQ08206 761 aa12.4□□□□□ -0.42
PEX27YOR193W VMA1P17255 1071 aaKnown RBP12.38□□□□□ -0.43
PEX27YOR193W EAP1P36041 632 aaKnown RBP12.36□□□□□ -0.43
PEX27YOR193W SET4P42948 560 aa12.35□□□□□ -0.43
PEX27YOR193W SAM3Q08986 587 aa12.34□□□□□ -0.43
PEX27YOR193W YJL171CP46992 396 aa12.3□□□□□ -0.44
PEX27YOR193W TRP5P00931 707 aaKnown RBP12.28□□□□□ -0.44
PEX27YOR193W RTG1P32607 177 aa12.21□□□□□ -0.45
PEX27YOR193W BMT6Q12291 365 aa12.18□□□□□ -0.46
PEX27YOR193W YNL035CP53962 389 aaKnown RBP12.16□□□□□ -0.46
PEX27YOR193W NCR1Q12200 1170 aa12.12□□□□□ -0.47
PEX27YOR193W SEC61P32915 480 aa12.11□□□□□ -0.47
PEX27YOR193W GYP5Q12344 894 aa12.11□□□□□ -0.47
PEX27YOR193W ABP1P15891 592 aaKnown RBP12.09□□□□□ -0.47
PEX27YOR193W RAM2P29703 316 aa12.05□□□□□ -0.48
PEX27YOR193W DAN4P47179 1161 aa12.04□□□□□ -0.48
PEX27YOR193W JIP4Q03361 876 aa12.02□□□□□ -0.49
PEX27YOR193W HTA1P04911 132 aaKnown RBP12.01□□□□□ -0.49
PEX27YOR193W HTA2P04912 132 aa12.01□□□□□ -0.49
PEX27YOR193W DCW1P36091 449 aa12.01□□□□□ -0.49
PEX27YOR193W MAK11P20484 414 aaKnown RBP12□□□□□ -0.49
PEX27YOR193W EDS1P38073 919 aa11.93□□□□□ -0.5
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms