RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C MTC1P47018 478 aaKnown RBP14.4□□□□□ -0.1
VPS21YOR089C DRS1P32892 752 aaKnown RBP13.26□□□□□ -0.29
VPS21YOR089C FAP1P53971 965 aa13.06□□□□□ -0.32
VPS21YOR089C PRY3P47033 881 aa12.31□□□□□ -0.44
VPS21YOR089C PRI1P10363 409 aa12.22□□□□□ -0.45
VPS21YOR089C AAD16Q02895 342 aa12.13□□□□□ -0.47
VPS21YOR089C ISW2Q08773 1120 aa11.89□□□□□ -0.51
VPS21YOR089C RPG1P38249 964 aaKnown RBP11.83□□□□□ -0.52
VPS21YOR089C YCK3P39962 524 aa11.77□□□□□ -0.53
VPS21YOR089C DIP2Q12220 943 aaPredicted RBP11.68□□□□□ -0.54
VPS21YOR089C TSR3Q12094 313 aaKnown RBP11.55□□□□□ -0.56
VPS21YOR089C HAA1Q12753 694 aaKnown RBP11.51□□□□□ -0.57
VPS21YOR089C RSE1Q04693 1361 aaKnown RBP11.31□□□□□ -0.6
VPS21YOR089C AVT3P36062 692 aa11.26□□□□□ -0.61
VPS21YOR089C MRPL32P25348 183 aa11.03□□□□□ -0.64
VPS21YOR089C RPL17AP05740 184 aaKnown RBP11□□□□□ -0.65
VPS21YOR089C RPL17BP46990 184 aaKnown RBP11□□□□□ -0.65
VPS21YOR089C BFR2Q06631 534 aaKnown RBP10.94□□□□□ -0.66
VPS21YOR089C REB1P21538 810 aa10.91□□□□□ -0.66
VPS21YOR089C YGL015CP33199 130 aa10.61□□□□□ -0.71
VPS21YOR089C SPT21P35209 758 aa10.57□□□□□ -0.72
VPS21YOR089C CDC27P38042 758 aa10.56□□□□□ -0.72
VPS21YOR089C YKR023WP36119 530 aaKnown RBP10.48□□□□□ -0.73
VPS21YOR089C HOP09932 586 aa10.25□□□□□ -0.77
VPS21YOR089C TFC8Q12308 588 aa10.25□□□□□ -0.77
VPS21YOR089C DCD1P06773 312 aa10.24□□□□□ -0.77
VPS21YOR089C MAP2P38174 421 aaKnown RBP10.22□□□□□ -0.77
VPS21YOR089C UBP10P53874 792 aaPredicted RBP10.2□□□□□ -0.78
VPS21YOR089C RIM101P33400 625 aa10.14□□□□□ -0.79
VPS21YOR089C TFA1P36100 482 aa10.03□□□□□ -0.8
VPS21YOR089C SCY1P53009 804 aa9.96□□□□□ -0.82
VPS21YOR089C BCH2P36122 765 aa9.9□□□□□ -0.82
VPS21YOR089C BUD31P25337 157 aaPredicted RBP9.84□□□□□ -0.83
VPS21YOR089C OXP1P28273 1286 aa9.82□□□□□ -0.84
VPS21YOR089C SLX5P32828 619 aaKnown RBP9.82□□□□□ -0.84
VPS21YOR089C TIF4632P39936 914 aaKnown RBP9.73□□□□□ -0.85
VPS21YOR089C TGL3P40308 642 aa9.72□□□□□ -0.85
VPS21YOR089C EPS1P40557 701 aa9.64□□□□□ -0.87
VPS21YOR089C BDF1P35817 686 aa9.61□□□□□ -0.87
VPS21YOR089C PTP3P40048 928 aa9.58□□□□□ -0.88
VPS21YOR089C YIL055CP40523 627 aaKnown RBP9.56□□□□□ -0.88
VPS21YOR089C RSM7P47150 247 aa9.47□□□□□ -0.89
VPS21YOR089C YAH1Q12184 172 aaKnown RBP9.46□□□□□ -0.9
VPS21YOR089C UBP9P39967 754 aa9.42□□□□□ -0.9
VPS21YOR089C AI2P03876 854 aa9.4□□□□□ -0.9
VPS21YOR089C BBC1P47068 1157 aa9.36□□□□□ -0.91
VPS21YOR089C MST1P07236 462 aa9.34□□□□□ -0.91
VPS21YOR089C YLR271WQ06152 274 aa9.33□□□□□ -0.92
VPS21YOR089C SIS1P25294 352 aaKnown RBP9.3□□□□□ -0.92
VPS21YOR089C RQC2Q12532 1038 aaKnown RBP9.29□□□□□ -0.92
VPS21YOR089C NSR1P27476 414 aaKnown RBP RIP-Chip data9.28□□□□□ -0.92not detected
VPS21YOR089C YOR238WQ08634 303 aa9.26□□□□□ -0.93
VPS21YOR089C PSD2P53037 1138 aaKnown RBP9.21□□□□□ -0.94
VPS21YOR089C YBL029C-AQ3E756 94 aa9.21□□□□□ -0.94
VPS21YOR089C YAP5P40574 245 aa9.17□□□□□ -0.94
VPS21YOR089C SSP1P38871 571 aa9.14□□□□□ -0.95
VPS21YOR089C VNX1P42839 908 aa9.1□□□□□ -0.95
VPS21YOR089C MRM1P25270 412 aa9.07□□□□□ -0.96
VPS21YOR089C WSC3Q12215 556 aa9.03□□□□□ -0.96
VPS21YOR089C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.03□□□□□ -0.96not detected
VPS21YOR089C CST9Q06032 482 aa9.01□□□□□ -0.97
VPS21YOR089C PIB1Q06651 286 aa8.99□□□□□ -0.97
VPS21YOR089C SPP1Q03012 353 aa8.97□□□□□ -0.97
VPS21YOR089C GTT3P39996 337 aa8.95□□□□□ -0.98
VPS21YOR089C VPS29P38759 282 aa8.91□□□□□ -0.98
VPS21YOR089C TIF11P38912 153 aaKnown RBP8.91□□□□□ -0.98
VPS21YOR089C MGA2P40578 1113 aa8.91□□□□□ -0.98
VPS21YOR089C FKH1P40466 484 aa8.84□□□□□ -0.99
VPS21YOR089C AIR2Q12476 344 aaKnown RBP8.84□□□□□ -0.99
VPS21YOR089C RTG3P38165 486 aa8.83□□□□□ -1
VPS21YOR089C YMR1P47147 688 aaKnown RBP RIP-Chip data8.83□□□□□ -1not detected
VPS21YOR089C DBP1P24784 617 aaKnown RBP8.82□□□□□ -1
VPS21YOR089C RCR1P38212 213 aa8.82□□□□□ -1
VPS21YOR089C STS1P38637 319 aa8.81□□□□□ -1
VPS21YOR089C YFR006WP43590 535 aa8.81□□□□□ -1
VPS21YOR089C IOC2Q12072 812 aa8.81□□□□□ -1
VPS21YOR089C ULI1P43604 169 aa8.8□□□□□ -1
VPS21YOR089C LDB19Q12502 818 aa8.78□□□□□ -1
VPS21YOR089C YOL036WQ08206 761 aa8.77□□□□□ -1.01
VPS21YOR089C MSB4Q12317 492 aa8.76□□□□□ -1.01
VPS21YOR089C SET4P42948 560 aa8.74□□□□□ -1.01
VPS21YOR089C VMA1P17255 1071 aaKnown RBP8.73□□□□□ -1.01
VPS21YOR089C SAM3Q08986 587 aa8.7□□□□□ -1.02
VPS21YOR089C TRP5P00931 707 aaKnown RBP8.68□□□□□ -1.02
VPS21YOR089C EAP1P36041 632 aaKnown RBP8.67□□□□□ -1.02
VPS21YOR089C YJL171CP46992 396 aa8.66□□□□□ -1.02
VPS21YOR089C RTG1P32607 177 aa8.61□□□□□ -1.03
VPS21YOR089C BMT6Q12291 365 aa8.59□□□□□ -1.03
VPS21YOR089C YNL035CP53962 389 aaKnown RBP8.56□□□□□ -1.04
VPS21YOR089C NCR1Q12200 1170 aa8.54□□□□□ -1.04
VPS21YOR089C GYP5Q12344 894 aa8.53□□□□□ -1.04
VPS21YOR089C SEC61P32915 480 aa8.52□□□□□ -1.05
VPS21YOR089C RAM2P29703 316 aa8.51□□□□□ -1.05
VPS21YOR089C DAN4P47179 1161 aa8.5□□□□□ -1.05
VPS21YOR089C ABP1P15891 592 aaKnown RBP8.48□□□□□ -1.05
VPS21YOR089C DCW1P36091 449 aa8.48□□□□□ -1.05
VPS21YOR089C HTA1P04911 132 aaKnown RBP8.45□□□□□ -1.06
VPS21YOR089C HTA2P04912 132 aa8.45□□□□□ -1.06
VPS21YOR089C MAK11P20484 414 aaKnown RBP8.45□□□□□ -1.06
VPS21YOR089C EDS1P38073 919 aa8.45□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms