RNA–Protein interactions for RNA: YOR063W

RPL3, Transcript of Ribosomal 60S subunit protein L3, yeastyeast

Gene RPL3, Length 1,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL3YOR063W DRS1P32892 752 aaKnown RBP12.54□□□□□ -0.4
RPL3YOR063W MTC1P47018 478 aaKnown RBP11.72□□□□□ -0.53
RPL3YOR063W BFR2Q06631 534 aaKnown RBP11.18□□□□□ -0.62
RPL3YOR063W MON2P48563 1636 aaPredicted RBP11.12□□□□□ -0.63
RPL3YOR063W INO80P53115 1489 aa11.11□□□□□ -0.63
RPL3YOR063W TFA1P36100 482 aa11.05□□□□□ -0.64
RPL3YOR063W DNA2P38859 1522 aa10.57□□□□□ -0.72
RPL3YOR063W RSE1Q04693 1361 aaKnown RBP10.49□□□□□ -0.73
RPL3YOR063W AVT3P36062 692 aa10.48□□□□□ -0.73
RPL3YOR063W DIP2Q12220 943 aaPredicted RBP10.42□□□□□ -0.74
RPL3YOR063W KOG1P38873 1557 aa10.36□□□□□ -0.75
RPL3YOR063W SWR1Q05471 1514 aa10.34□□□□□ -0.75
RPL3YOR063W RQC2Q12532 1038 aaKnown RBP10.21□□□□□ -0.77
RPL3YOR063W TY1B-DR4Q07793 1604 aa10.01□□□□□ -0.81
RPL3YOR063W TCB3Q03640 1545 aaKnown RBP10□□□□□ -0.81
RPL3YOR063W SPA2P23201 1466 aaKnown RBP9.93□□□□□ -0.82
RPL3YOR063W ECM5Q03214 1411 aa9.59□□□□□ -0.87
RPL3YOR063W SPT6P23615 1451 aaKnown RBP9.54□□□□□ -0.88
RPL3YOR063W HSL1P34244 1518 aa9.53□□□□□ -0.88
RPL3YOR063W SGS1P35187 1447 aa9.45□□□□□ -0.9
RPL3YOR063W BUD4P47136 1447 aa9.44□□□□□ -0.9
RPL3YOR063W THO2P53552 1597 aaKnown RBP9.44□□□□□ -0.9
RPL3YOR063W DMA1P38823 416 aa9.39□□□□□ -0.91
RPL3YOR063W REV3P14284 1504 aa9.39□□□□□ -0.91
RPL3YOR063W MDS3P53094 1487 aa9.39□□□□□ -0.91
RPL3YOR063W MIF2P35201 549 aa9.38□□□□□ -0.91
RPL3YOR063W ISW2Q08773 1120 aa9.37□□□□□ -0.91
RPL3YOR063W TAF7Q05021 590 aa9.3□□□□□ -0.92
RPL3YOR063W FAP1P53971 965 aa9.29□□□□□ -0.92
RPL3YOR063W HIR3P47171 1648 aa9.29□□□□□ -0.92
RPL3YOR063W PEP1P32319 1579 aa9.23□□□□□ -0.93
RPL3YOR063W RPL17AP05740 184 aaKnown RBP9.22□□□□□ -0.93
RPL3YOR063W RPG1P38249 964 aaKnown RBP9.22□□□□□ -0.93
RPL3YOR063W RPL17BP46990 184 aaKnown RBP9.22□□□□□ -0.93
RPL3YOR063W BPT1P14772 1559 aa9.2□□□□□ -0.94
RPL3YOR063W PTP3P40048 928 aa9.14□□□□□ -0.95
RPL3YOR063W ATG2P53855 1592 aa9.05□□□□□ -0.96
RPL3YOR063W REB1P21538 810 aa9.03□□□□□ -0.96
RPL3YOR063W XRN1P22147 1528 aaKnown RBP9.03□□□□□ -0.96
RPL3YOR063W YCF1P39109 1515 aaKnown RBP9.03□□□□□ -0.96
RPL3YOR063W PRI1P10363 409 aa9.02□□□□□ -0.97
RPL3YOR063W YFR006WP43590 535 aa9□□□□□ -0.97
RPL3YOR063W RIM101P33400 625 aa8.99□□□□□ -0.97
RPL3YOR063W LEO1P38439 464 aa8.98□□□□□ -0.97
RPL3YOR063W SSP1P38871 571 aa8.93□□□□□ -0.98
RPL3YOR063W TAF2P23255 1407 aa8.93□□□□□ -0.98
RPL3YOR063W SPT21P35209 758 aa8.92□□□□□ -0.98
RPL3YOR063W AAD16Q02895 342 aa8.9□□□□□ -0.98
RPL3YOR063W SSK2P53599 1579 aa8.89□□□□□ -0.99
RPL3YOR063W MYO2P19524 1574 aaKnown RBP8.88□□□□□ -0.99
RPL3YOR063W MET5P47169 1442 aa8.88□□□□□ -0.99
RPL3YOR063W LTE1P07866 1435 aa8.87□□□□□ -0.99
RPL3YOR063W SKI3P17883 1432 aaKnown RBP8.82□□□□□ -1
RPL3YOR063W ABP1P15891 592 aaKnown RBP8.82□□□□□ -1
RPL3YOR063W BNI1P41832 1953 aa8.81□□□□□ -1
RPL3YOR063W CDC25P04821 1589 aa8.79□□□□□ -1
RPL3YOR063W RPA190P10964 1664 aaKnown RBP8.75□□□□□ -1.01
RPL3YOR063W OXP1P28273 1286 aa8.73□□□□□ -1.01
RPL3YOR063W UFD4P33202 1483 aa8.72□□□□□ -1.01
RPL3YOR063W ITT1Q04638 464 aa8.72□□□□□ -1.01
RPL3YOR063W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.72□□□□□ -1.01not detected
RPL3YOR063W SIN3P22579 1536 aa8.7□□□□□ -1.02
RPL3YOR063W GEA2P39993 1459 aaKnown RBP8.7□□□□□ -1.02
RPL3YOR063W DNF1P32660 1571 aa8.69□□□□□ -1.02
RPL3YOR063W YAH1Q12184 172 aaKnown RBP8.69□□□□□ -1.02
RPL3YOR063W PRY3P47033 881 aa8.68□□□□□ -1.02
RPL3YOR063W CHD1P32657 1468 aa8.67□□□□□ -1.02
RPL3YOR063W LEU3P08638 886 aa8.66□□□□□ -1.02
RPL3YOR063W SAS10Q12136 610 aaPredicted RBP8.66□□□□□ -1.02
RPL3YOR063W RKR1Q04781 1562 aa8.65□□□□□ -1.02
RPL3YOR063W ESC1Q03661 1658 aaKnown RBP8.65□□□□□ -1.03
RPL3YOR063W RPO31P04051 1460 aa8.64□□□□□ -1.03
RPL3YOR063W MMS1Q06211 1407 aa8.63□□□□□ -1.03
RPL3YOR063W SSN2P38931 1420 aa8.63□□□□□ -1.03
RPL3YOR063W YIL055CP40523 627 aaKnown RBP8.62□□□□□ -1.03
RPL3YOR063W YLR271WQ06152 274 aa8.61□□□□□ -1.03
RPL3YOR063W IRC20Q06554 1556 aa8.61□□□□□ -1.03
RPL3YOR063W ESP1Q03018 1630 aa8.58□□□□□ -1.04
RPL3YOR063W TSR3Q12094 313 aaKnown RBP8.58□□□□□ -1.04
RPL3YOR063W PAN1P32521 1480 aa8.56□□□□□ -1.04
RPL3YOR063W SCC2Q04002 1493 aa8.56□□□□□ -1.04
RPL3YOR063W MGA2P40578 1113 aa8.53□□□□□ -1.04
RPL3YOR063W YPK9Q12697 1472 aa8.52□□□□□ -1.05
RPL3YOR063W DRS2P39524 1355 aa8.5□□□□□ -1.05
RPL3YOR063W TY1B-BRQ12193 1756 aa8.5□□□□□ -1.05
RPL3YOR063W TY1B-GR3Q12316 1755 aa8.5□□□□□ -1.05
RPL3YOR063W TY1B-ORQ92393 1755 aa8.5□□□□□ -1.05
RPL3YOR063W YKR023WP36119 530 aaKnown RBP8.47□□□□□ -1.05
RPL3YOR063W RSM7P47150 247 aa8.47□□□□□ -1.05
RPL3YOR063W TY2B-LR1P0C2J3 1770 aa8.45□□□□□ -1.06
RPL3YOR063W TY2B-FP0CX63 1770 aa8.45□□□□□ -1.06
RPL3YOR063W TY2B-GR2P0CX64 1770 aa8.45□□□□□ -1.06
RPL3YOR063W TY2B-CP25384 1770 aa8.45□□□□□ -1.06
RPL3YOR063W TY2B-DR2Q03494 1770 aa8.45□□□□□ -1.06
RPL3YOR063W TY1B-DR1Q03855 1755 aa8.45□□□□□ -1.06
RPL3YOR063W TY2B-DR3Q07791 1770 aaKnown RBP8.45□□□□□ -1.06
RPL3YOR063W TY2B-OR1Q12113 1770 aa8.45□□□□□ -1.06
RPL3YOR063W TY2B-DR1Q12472 1770 aa8.45□□□□□ -1.06
RPL3YOR063W TY2B-OR2Q12501 1770 aa8.45□□□□□ -1.06
RPL3YOR063W DNF2Q12675 1612 aa8.42□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms