RNA–Protein interactions for RNA: YOL124C

TRM11, Transcript of Catalytic subunit of adoMet-dependent tRNA methyltransferase complex, yeastyeast

Gene TRM11, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM11YOL124C MTC1P47018 478 aaKnown RBP14.31□□□□□ -0.12
TRM11YOL124C FAP1P53971 965 aa13.31□□□□□ -0.28
TRM11YOL124C DRS1P32892 752 aaKnown RBP12.97□□□□□ -0.33
TRM11YOL124C PRY3P47033 881 aa12.5□□□□□ -0.41
TRM11YOL124C PRI1P10363 409 aa12.28□□□□□ -0.44
TRM11YOL124C AAD16Q02895 342 aa12.26□□□□□ -0.45
TRM11YOL124C ISW2Q08773 1120 aa12□□□□□ -0.49
TRM11YOL124C RPG1P38249 964 aaKnown RBP11.82□□□□□ -0.52
TRM11YOL124C HAA1Q12753 694 aaKnown RBP11.78□□□□□ -0.52
TRM11YOL124C YCK3P39962 524 aa11.7□□□□□ -0.54
TRM11YOL124C TSR3Q12094 313 aaKnown RBP11.54□□□□□ -0.56
TRM11YOL124C DIP2Q12220 943 aaPredicted RBP11.52□□□□□ -0.57
TRM11YOL124C RSE1Q04693 1361 aaKnown RBP11.27□□□□□ -0.61
TRM11YOL124C MRPL32P25348 183 aa11.17□□□□□ -0.62
TRM11YOL124C AVT3P36062 692 aa10.98□□□□□ -0.65
TRM11YOL124C REB1P21538 810 aa10.93□□□□□ -0.66
TRM11YOL124C RPL17AP05740 184 aaKnown RBP10.9□□□□□ -0.66
TRM11YOL124C RPL17BP46990 184 aaKnown RBP10.9□□□□□ -0.66
TRM11YOL124C YGL015CP33199 130 aa10.84□□□□□ -0.67
TRM11YOL124C BFR2Q06631 534 aaKnown RBP10.61□□□□□ -0.71
TRM11YOL124C CDC27P38042 758 aa10.45□□□□□ -0.74
TRM11YOL124C SPT21P35209 758 aa10.39□□□□□ -0.75
TRM11YOL124C YKR023WP36119 530 aaKnown RBP10.35□□□□□ -0.75
TRM11YOL124C UBP10P53874 792 aaPredicted RBP10.33□□□□□ -0.76
TRM11YOL124C MAP2P38174 421 aaKnown RBP10.19□□□□□ -0.78
TRM11YOL124C TFC8Q12308 588 aa10.16□□□□□ -0.78
TRM11YOL124C HOP09932 586 aa10.12□□□□□ -0.79
TRM11YOL124C BUD31P25337 157 aaPredicted RBP10.07□□□□□ -0.8
TRM11YOL124C DCD1P06773 312 aa10.06□□□□□ -0.8
TRM11YOL124C RIM101P33400 625 aa9.97□□□□□ -0.81
TRM11YOL124C SCY1P53009 804 aa9.94□□□□□ -0.82
TRM11YOL124C TIF4632P39936 914 aaKnown RBP9.93□□□□□ -0.82
TRM11YOL124C SLX5P32828 619 aaKnown RBP9.88□□□□□ -0.83
TRM11YOL124C TGL3P40308 642 aa9.86□□□□□ -0.83
TRM11YOL124C BCH2P36122 765 aa9.81□□□□□ -0.84
TRM11YOL124C UBP9P39967 754 aa9.72□□□□□ -0.85
TRM11YOL124C OXP1P28273 1286 aa9.57□□□□□ -0.88
TRM11YOL124C SIS1P25294 352 aaKnown RBP9.56□□□□□ -0.88
TRM11YOL124C EPS1P40557 701 aa9.55□□□□□ -0.88
TRM11YOL124C YIL055CP40523 627 aaKnown RBP9.53□□□□□ -0.88
TRM11YOL124C BDF1P35817 686 aa9.52□□□□□ -0.89
TRM11YOL124C PTP3P40048 928 aa9.5□□□□□ -0.89
TRM11YOL124C MST1P07236 462 aa9.38□□□□□ -0.91
TRM11YOL124C BBC1P47068 1157 aa9.38□□□□□ -0.91
TRM11YOL124C YOR238WQ08634 303 aa9.36□□□□□ -0.91
TRM11YOL124C RSM7P47150 247 aa9.35□□□□□ -0.91
TRM11YOL124C NSR1P27476 414 aaKnown RBP RIP-Chip data9.34□□□□□ -0.91not detected
TRM11YOL124C TFA1P36100 482 aa9.31□□□□□ -0.92
TRM11YOL124C AI2P03876 854 aa9.29□□□□□ -0.92
TRM11YOL124C YAH1Q12184 172 aaKnown RBP9.25□□□□□ -0.93
TRM11YOL124C YBL029C-AQ3E756 94 aa9.25□□□□□ -0.93
TRM11YOL124C YAP5P40574 245 aa9.24□□□□□ -0.93
TRM11YOL124C VNX1P42839 908 aa9.16□□□□□ -0.94
TRM11YOL124C SPP1Q03012 353 aa9.1□□□□□ -0.95
TRM11YOL124C YLR271WQ06152 274 aa9.08□□□□□ -0.96
TRM11YOL124C WSC3Q12215 556 aa9.06□□□□□ -0.96
TRM11YOL124C GTT3P39996 337 aa9.05□□□□□ -0.96
TRM11YOL124C PSD2P53037 1138 aaKnown RBP9.02□□□□□ -0.97
TRM11YOL124C TIF11P38912 153 aaKnown RBP9□□□□□ -0.97
TRM11YOL124C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.97□□□□□ -0.97not detected
TRM11YOL124C MRM1P25270 412 aa8.92□□□□□ -0.98
TRM11YOL124C SSP1P38871 571 aa8.92□□□□□ -0.98
TRM11YOL124C YJL171CP46992 396 aa8.91□□□□□ -0.98
TRM11YOL124C FKH1P40466 484 aa8.9□□□□□ -0.98
TRM11YOL124C AIR2Q12476 344 aaKnown RBP8.9□□□□□ -0.98
TRM11YOL124C ULI1P43604 169 aa8.86□□□□□ -0.99
TRM11YOL124C PIB1Q06651 286 aa8.86□□□□□ -0.99
TRM11YOL124C MSB4Q12317 492 aa8.84□□□□□ -0.99
TRM11YOL124C LDB19Q12502 818 aa8.84□□□□□ -0.99
TRM11YOL124C EAP1P36041 632 aaKnown RBP8.82□□□□□ -1
TRM11YOL124C IOC2Q12072 812 aa8.82□□□□□ -1
TRM11YOL124C YMR1P47147 688 aaKnown RBP RIP-Chip data8.79□□□□□ -1not detected
TRM11YOL124C MGA2P40578 1113 aa8.77□□□□□ -1.01
TRM11YOL124C RTG3P38165 486 aa8.76□□□□□ -1.01
TRM11YOL124C BMT6Q12291 365 aa8.76□□□□□ -1.01
TRM11YOL124C DBP1P24784 617 aaKnown RBP8.73□□□□□ -1.01
TRM11YOL124C VPS29P38759 282 aa8.73□□□□□ -1.01
TRM11YOL124C YOL036WQ08206 761 aa8.73□□□□□ -1.01
TRM11YOL124C CST9Q06032 482 aa8.72□□□□□ -1.01
TRM11YOL124C SET4P42948 560 aa8.7□□□□□ -1.02
TRM11YOL124C TRP5P00931 707 aaKnown RBP8.67□□□□□ -1.02
TRM11YOL124C RTG1P32607 177 aa8.67□□□□□ -1.02
TRM11YOL124C VMA1P17255 1071 aaKnown RBP8.66□□□□□ -1.02
TRM11YOL124C YFR006WP43590 535 aa8.65□□□□□ -1.02
TRM11YOL124C SAM3Q08986 587 aa8.65□□□□□ -1.02
TRM11YOL124C STS1P38637 319 aa8.63□□□□□ -1.03
TRM11YOL124C YNL035CP53962 389 aaKnown RBP8.63□□□□□ -1.03
TRM11YOL124C NCR1Q12200 1170 aa8.63□□□□□ -1.03
TRM11YOL124C SEC61P32915 480 aa8.62□□□□□ -1.03
TRM11YOL124C ABP1P15891 592 aaKnown RBP8.58□□□□□ -1.04
TRM11YOL124C TFG1P41895 735 aaPredicted RBP8.56□□□□□ -1.04
TRM11YOL124C RCR1P38212 213 aa8.54□□□□□ -1.04
TRM11YOL124C JIP4Q03361 876 aa8.53□□□□□ -1.04
TRM11YOL124C GYP5Q12344 894 aa8.51□□□□□ -1.05
TRM11YOL124C HTA1P04911 132 aaKnown RBP8.48□□□□□ -1.05
TRM11YOL124C HTA2P04912 132 aa8.48□□□□□ -1.05
TRM11YOL124C DAN4P47179 1161 aa8.46□□□□□ -1.06
TRM11YOL124C YDL129WQ07555 291 aa8.43□□□□□ -1.06
TRM11YOL124C SAP30P38429 201 aa8.42□□□□□ -1.06
TRM11YOL124C DCW1P36091 449 aa8.41□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms