RNA–Protein interactions for RNA: YOL116W

MSN1, Transcript of Transcriptional activator, yeastyeast

Gene MSN1, Length 1,149 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN1YOL116W FAP1P53971 965 aa12.4□□□□□ -0.42
MSN1YOL116W MTC1P47018 478 aaKnown RBP12.34□□□□□ -0.43
MSN1YOL116W PRY3P47033 881 aa11.69□□□□□ -0.54
MSN1YOL116W DRS1P32892 752 aaKnown RBP11.45□□□□□ -0.58
MSN1YOL116W AAD16Q02895 342 aa11.15□□□□□ -0.62
MSN1YOL116W PRI1P10363 409 aa11.06□□□□□ -0.64
MSN1YOL116W YCK3P39962 524 aa10.98□□□□□ -0.65
MSN1YOL116W HAA1Q12753 694 aaKnown RBP10.96□□□□□ -0.65
MSN1YOL116W ISW2Q08773 1120 aa10.5□□□□□ -0.73
MSN1YOL116W RPG1P38249 964 aaKnown RBP10.38□□□□□ -0.75
MSN1YOL116W TSR3Q12094 313 aaKnown RBP10.36□□□□□ -0.75
MSN1YOL116W MRPL32P25348 183 aa10□□□□□ -0.81
MSN1YOL116W YGL015CP33199 130 aa9.94□□□□□ -0.82
MSN1YOL116W DIP2Q12220 943 aaPredicted RBP9.88□□□□□ -0.83
MSN1YOL116W BFR2Q06631 534 aaKnown RBP9.75□□□□□ -0.85
MSN1YOL116W BUD31P25337 157 aaPredicted RBP9.62□□□□□ -0.87
MSN1YOL116W AVT3P36062 692 aa9.6□□□□□ -0.87
MSN1YOL116W RSE1Q04693 1361 aaKnown RBP9.51□□□□□ -0.89
MSN1YOL116W REB1P21538 810 aa9.35□□□□□ -0.91
MSN1YOL116W RPL17AP05740 184 aaKnown RBP9.26□□□□□ -0.93
MSN1YOL116W RPL17BP46990 184 aaKnown RBP9.26□□□□□ -0.93
MSN1YOL116W CDC27P38042 758 aa9.24□□□□□ -0.93
MSN1YOL116W UBP10P53874 792 aaPredicted RBP9.21□□□□□ -0.94
MSN1YOL116W MAP2P38174 421 aaKnown RBP9.11□□□□□ -0.95
MSN1YOL116W SIS1P25294 352 aaKnown RBP9.03□□□□□ -0.96
MSN1YOL116W YKR023WP36119 530 aaKnown RBP8.95□□□□□ -0.98
MSN1YOL116W UBP9P39967 754 aa8.92□□□□□ -0.98
MSN1YOL116W TFA1P36100 482 aa8.9□□□□□ -0.98
MSN1YOL116W TIF4632P39936 914 aaKnown RBP8.85□□□□□ -0.99
MSN1YOL116W TGL3P40308 642 aa8.83□□□□□ -1
MSN1YOL116W SPT21P35209 758 aa8.79□□□□□ -1
MSN1YOL116W TFC8Q12308 588 aa8.79□□□□□ -1
MSN1YOL116W HOP09932 586 aa8.75□□□□□ -1.01
MSN1YOL116W DCD1P06773 312 aa8.73□□□□□ -1.01
MSN1YOL116W SCY1P53009 804 aa8.71□□□□□ -1.02
MSN1YOL116W SLX5P32828 619 aaKnown RBP8.7□□□□□ -1.02
MSN1YOL116W RIM101P33400 625 aa8.51□□□□□ -1.05
MSN1YOL116W BCH2P36122 765 aa8.44□□□□□ -1.06
MSN1YOL116W MST1P07236 462 aa8.32□□□□□ -1.08
MSN1YOL116W YBL029C-AQ3E756 94 aa8.32□□□□□ -1.08
MSN1YOL116W YOR238WQ08634 303 aa8.22□□□□□ -1.09
MSN1YOL116W YIL055CP40523 627 aaKnown RBP8.21□□□□□ -1.1
MSN1YOL116W OXP1P28273 1286 aa8.2□□□□□ -1.1
MSN1YOL116W VNX1P42839 908 aa8.2□□□□□ -1.1
MSN1YOL116W BDF1P35817 686 aa8.15□□□□□ -1.1
MSN1YOL116W PTP3P40048 928 aa8.14□□□□□ -1.11
MSN1YOL116W EPS1P40557 701 aa8.14□□□□□ -1.11
MSN1YOL116W SPP1Q03012 353 aa8.13□□□□□ -1.11
MSN1YOL116W NSR1P27476 414 aaKnown RBP RIP-Chip data8.11□□□□□ -1.11not detected
MSN1YOL116W YJL171CP46992 396 aa8.1□□□□□ -1.11
MSN1YOL116W AIR2Q12476 344 aaKnown RBP8.09□□□□□ -1.11
MSN1YOL116W YAH1Q12184 172 aaKnown RBP8.07□□□□□ -1.12
MSN1YOL116W FKH1P40466 484 aa8.03□□□□□ -1.12
MSN1YOL116W RSM7P47150 247 aa8.03□□□□□ -1.12
MSN1YOL116W SSP1P38871 571 aa8□□□□□ -1.13
MSN1YOL116W YAP5P40574 245 aa8□□□□□ -1.13
MSN1YOL116W WSC3Q12215 556 aa8□□□□□ -1.13
MSN1YOL116W TIF11P38912 153 aaKnown RBP7.98□□□□□ -1.13
MSN1YOL116W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
MSN1YOL116W BBC1P47068 1157 aa7.95□□□□□ -1.14
MSN1YOL116W YLR271WQ06152 274 aa7.93□□□□□ -1.14
MSN1YOL116W AI2P03876 854 aa7.9□□□□□ -1.14
MSN1YOL116W BMT6Q12291 365 aa7.88□□□□□ -1.15
MSN1YOL116W GTT3P39996 337 aa7.85□□□□□ -1.15
MSN1YOL116W LDB19Q12502 818 aa7.85□□□□□ -1.15
MSN1YOL116W ULI1P43604 169 aa7.79□□□□□ -1.16
MSN1YOL116W IOC2Q12072 812 aa7.79□□□□□ -1.16
MSN1YOL116W MGA2P40578 1113 aa7.77□□□□□ -1.17
MSN1YOL116W PSD2P53037 1138 aaKnown RBP7.76□□□□□ -1.17
MSN1YOL116W EAP1P36041 632 aaKnown RBP7.65□□□□□ -1.18
MSN1YOL116W CST9Q06032 482 aa7.65□□□□□ -1.18
MSN1YOL116W MSB4Q12317 492 aa7.65□□□□□ -1.18
MSN1YOL116W MRM1P25270 412 aa7.64□□□□□ -1.19
MSN1YOL116W RTG1P32607 177 aa7.6□□□□□ -1.19
MSN1YOL116W NCR1Q12200 1170 aa7.6□□□□□ -1.19
MSN1YOL116W PIB1Q06651 286 aa7.57□□□□□ -1.2
MSN1YOL116W RTG3P38165 486 aa7.55□□□□□ -1.2
MSN1YOL116W TRP5P00931 707 aaKnown RBP7.53□□□□□ -1.2
MSN1YOL116W SEC61P32915 480 aa7.53□□□□□ -1.2
MSN1YOL116W YNL035CP53962 389 aaKnown RBP7.51□□□□□ -1.21
MSN1YOL116W BCK2P33306 851 aa7.49□□□□□ -1.21
MSN1YOL116W SET4P42948 560 aa7.49□□□□□ -1.21
MSN1YOL116W YOL036WQ08206 761 aa7.49□□□□□ -1.21
MSN1YOL116W YMR1P47147 688 aaKnown RBP RIP-Chip data7.46□□□□□ -1.22not detected
MSN1YOL116W VPS29P38759 282 aa7.44□□□□□ -1.22
MSN1YOL116W TFG1P41895 735 aaPredicted RBP7.44□□□□□ -1.22
MSN1YOL116W DBP1P24784 617 aaKnown RBP7.4□□□□□ -1.22
MSN1YOL116W RCR1P38212 213 aa7.4□□□□□ -1.22
MSN1YOL116W CHL1P22516 861 aaPredicted RBP7.39□□□□□ -1.23
MSN1YOL116W SAP30P38429 201 aa7.37□□□□□ -1.23
MSN1YOL116W YFR006WP43590 535 aa7.34□□□□□ -1.23
MSN1YOL116W RAM2P29703 316 aa7.33□□□□□ -1.24
MSN1YOL116W STS1P38637 319 aa7.33□□□□□ -1.24
MSN1YOL116W MAK11P20484 414 aaKnown RBP7.32□□□□□ -1.24
MSN1YOL116W PRE3P38624 215 aa7.32□□□□□ -1.24
MSN1YOL116W JIP4Q03361 876 aa7.32□□□□□ -1.24
MSN1YOL116W YDL129WQ07555 291 aa7.32□□□□□ -1.24
MSN1YOL116W SAM3Q08986 587 aa7.32□□□□□ -1.24
MSN1YOL116W DAN4P47179 1161 aa7.31□□□□□ -1.24
MSN1YOL116W RQC2Q12532 1038 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms