RNA–Protein interactions for RNA: YNR038W

DBP6, Transcript of Essential protein involved in ribosome biogenesis, yeastyeast

Gene DBP6, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DBP6YNR038W MTC1P47018 478 aaKnown RBP9.57□□□□□ -0.88
DBP6YNR038W DRS1P32892 752 aaKnown RBP8.75□□□□□ -1.01
DBP6YNR038W FAP1P53971 965 aa8.7□□□□□ -1.02
DBP6YNR038W PRY3P47033 881 aa8.19□□□□□ -1.1
DBP6YNR038W PRI1P10363 409 aa8.15□□□□□ -1.11
DBP6YNR038W AAD16Q02895 342 aa8.11□□□□□ -1.11
DBP6YNR038W ISW2Q08773 1120 aa7.95□□□□□ -1.14
DBP6YNR038W RPG1P38249 964 aaKnown RBP7.85□□□□□ -1.15
DBP6YNR038W YCK3P39962 524 aa7.78□□□□□ -1.16
DBP6YNR038W DIP2Q12220 943 aaPredicted RBP7.75□□□□□ -1.17
DBP6YNR038W HAA1Q12753 694 aaKnown RBP7.73□□□□□ -1.17
DBP6YNR038W TSR3Q12094 313 aaKnown RBP7.65□□□□□ -1.18
DBP6YNR038W RSE1Q04693 1361 aaKnown RBP7.52□□□□□ -1.21
DBP6YNR038W AVT3P36062 692 aa7.45□□□□□ -1.22
DBP6YNR038W MRPL32P25348 183 aa7.37□□□□□ -1.23
DBP6YNR038W RPL17AP05740 184 aaKnown RBP7.27□□□□□ -1.25
DBP6YNR038W RPL17BP46990 184 aaKnown RBP7.27□□□□□ -1.25
DBP6YNR038W REB1P21538 810 aa7.25□□□□□ -1.25
DBP6YNR038W BFR2Q06631 534 aaKnown RBP7.2□□□□□ -1.26
DBP6YNR038W YGL015CP33199 130 aa7.14□□□□□ -1.27
DBP6YNR038W SPT21P35209 758 aa7□□□□□ -1.29
DBP6YNR038W CDC27P38042 758 aa6.98□□□□□ -1.29
DBP6YNR038W YKR023WP36119 530 aaKnown RBP6.94□□□□□ -1.3
DBP6YNR038W UBP10P53874 792 aaPredicted RBP6.84□□□□□ -1.31
DBP6YNR038W TFC8Q12308 588 aa6.81□□□□□ -1.32
DBP6YNR038W MAP2P38174 421 aaKnown RBP6.77□□□□□ -1.33
DBP6YNR038W HOP09932 586 aa6.77□□□□□ -1.33
DBP6YNR038W RIM101P33400 625 aa6.73□□□□□ -1.33
DBP6YNR038W DCD1P06773 312 aa6.73□□□□□ -1.33
DBP6YNR038W BUD31P25337 157 aaPredicted RBP6.6□□□□□ -1.35
DBP6YNR038W SCY1P53009 804 aa6.6□□□□□ -1.35
DBP6YNR038W BCH2P36122 765 aa6.57□□□□□ -1.36
DBP6YNR038W SLX5P32828 619 aaKnown RBP6.55□□□□□ -1.36
DBP6YNR038W TIF4632P39936 914 aaKnown RBP6.54□□□□□ -1.36
DBP6YNR038W TGL3P40308 642 aa6.53□□□□□ -1.36
DBP6YNR038W OXP1P28273 1286 aa6.48□□□□□ -1.37
DBP6YNR038W EPS1P40557 701 aa6.39□□□□□ -1.39
DBP6YNR038W BDF1P35817 686 aa6.38□□□□□ -1.39
DBP6YNR038W UBP9P39967 754 aa6.36□□□□□ -1.39
DBP6YNR038W YIL055CP40523 627 aaKnown RBP6.36□□□□□ -1.39
DBP6YNR038W PTP3P40048 928 aa6.34□□□□□ -1.39
DBP6YNR038W TFA1P36100 482 aa6.3□□□□□ -1.4
DBP6YNR038W RSM7P47150 247 aa6.29□□□□□ -1.4
DBP6YNR038W MST1P07236 462 aa6.28□□□□□ -1.4
DBP6YNR038W BBC1P47068 1157 aa6.25□□□□□ -1.41
DBP6YNR038W NSR1P27476 414 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
DBP6YNR038W AI2P03876 854 aa6.24□□□□□ -1.41
DBP6YNR038W SIS1P25294 352 aaKnown RBP6.24□□□□□ -1.41
DBP6YNR038W YAH1Q12184 172 aaKnown RBP6.21□□□□□ -1.42
DBP6YNR038W YOR238WQ08634 303 aa6.2□□□□□ -1.42
DBP6YNR038W YLR271WQ06152 274 aa6.16□□□□□ -1.42
DBP6YNR038W YAP5P40574 245 aa6.14□□□□□ -1.43
DBP6YNR038W YBL029C-AQ3E756 94 aa6.12□□□□□ -1.43
DBP6YNR038W PSD2P53037 1138 aaKnown RBP6.11□□□□□ -1.43
DBP6YNR038W VNX1P42839 908 aa6.09□□□□□ -1.44
DBP6YNR038W SSP1P38871 571 aa6.04□□□□□ -1.44
DBP6YNR038W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
DBP6YNR038W SPP1Q03012 353 aa6□□□□□ -1.45
DBP6YNR038W MRM1P25270 412 aa5.99□□□□□ -1.45
DBP6YNR038W WSC3Q12215 556 aa5.98□□□□□ -1.45
DBP6YNR038W GTT3P39996 337 aa5.97□□□□□ -1.45
DBP6YNR038W TIF11P38912 153 aaKnown RBP5.96□□□□□ -1.45
DBP6YNR038W MGA2P40578 1113 aa5.93□□□□□ -1.46
DBP6YNR038W CST9Q06032 482 aa5.92□□□□□ -1.46
DBP6YNR038W PIB1Q06651 286 aa5.91□□□□□ -1.46
DBP6YNR038W AIR2Q12476 344 aaKnown RBP5.91□□□□□ -1.46
DBP6YNR038W FKH1P40466 484 aa5.9□□□□□ -1.46
DBP6YNR038W VPS29P38759 282 aa5.9□□□□□ -1.47
DBP6YNR038W YMR1P47147 688 aaKnown RBP RIP-Chip data5.9□□□□□ -1.47not detected
DBP6YNR038W IOC2Q12072 812 aa5.89□□□□□ -1.47
DBP6YNR038W MSB4Q12317 492 aa5.89□□□□□ -1.47
DBP6YNR038W RTG3P38165 486 aa5.88□□□□□ -1.47
DBP6YNR038W ULI1P43604 169 aa5.88□□□□□ -1.47
DBP6YNR038W LDB19Q12502 818 aa5.86□□□□□ -1.47
DBP6YNR038W DBP1P24784 617 aaKnown RBP5.85□□□□□ -1.47
DBP6YNR038W EAP1P36041 632 aaKnown RBP5.85□□□□□ -1.47
DBP6YNR038W YJL171CP46992 396 aa5.83□□□□□ -1.48
DBP6YNR038W STS1P38637 319 aa5.82□□□□□ -1.48
DBP6YNR038W YOL036WQ08206 761 aa5.82□□□□□ -1.48
DBP6YNR038W SAM3Q08986 587 aa5.81□□□□□ -1.48
DBP6YNR038W VMA1P17255 1071 aaKnown RBP5.81□□□□□ -1.48
DBP6YNR038W YFR006WP43590 535 aa5.8□□□□□ -1.48
DBP6YNR038W RCR1P38212 213 aa5.79□□□□□ -1.48
DBP6YNR038W SET4P42948 560 aa5.79□□□□□ -1.48
DBP6YNR038W TRP5P00931 707 aaKnown RBP5.78□□□□□ -1.48
DBP6YNR038W BMT6Q12291 365 aa5.77□□□□□ -1.49
DBP6YNR038W RTG1P32607 177 aa5.75□□□□□ -1.49
DBP6YNR038W YNL035CP53962 389 aaKnown RBP5.74□□□□□ -1.49
DBP6YNR038W SEC61P32915 480 aa5.73□□□□□ -1.49
DBP6YNR038W NCR1Q12200 1170 aa5.73□□□□□ -1.49
DBP6YNR038W ABP1P15891 592 aaKnown RBP5.72□□□□□ -1.49
DBP6YNR038W DAN4P47179 1161 aa5.68□□□□□ -1.5
DBP6YNR038W JIP4Q03361 876 aa5.68□□□□□ -1.5
DBP6YNR038W GYP5Q12344 894 aa5.68□□□□□ -1.5
DBP6YNR038W HTA1P04911 132 aaKnown RBP5.65□□□□□ -1.5
DBP6YNR038W HTA2P04912 132 aa5.65□□□□□ -1.5
DBP6YNR038W TFG1P41895 735 aaPredicted RBP5.64□□□□□ -1.51
DBP6YNR038W PTC4P38089 393 aa5.63□□□□□ -1.51
DBP6YNR038W MAK11P20484 414 aaKnown RBP5.62□□□□□ -1.51
DBP6YNR038W DCW1P36091 449 aa5.62□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms