RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C MTC1P47018 478 aaKnown RBP13.15□□□□□ -0.3
ATG3YNR007C DRS1P32892 752 aaKnown RBP12.29□□□□□ -0.44
ATG3YNR007C FAP1P53971 965 aa11.8□□□□□ -0.52
ATG3YNR007C PRY3P47033 881 aa11.08□□□□□ -0.64
ATG3YNR007C PRI1P10363 409 aa11.07□□□□□ -0.64
ATG3YNR007C AAD16Q02895 342 aa11□□□□□ -0.65
ATG3YNR007C ISW2Q08773 1120 aa10.91□□□□□ -0.66
ATG3YNR007C DIP2Q12220 943 aaPredicted RBP10.78□□□□□ -0.68
ATG3YNR007C RPG1P38249 964 aaKnown RBP10.77□□□□□ -0.69
ATG3YNR007C TSR3Q12094 313 aaKnown RBP10.44□□□□□ -0.74
ATG3YNR007C YCK3P39962 524 aa10.43□□□□□ -0.74
ATG3YNR007C HAA1Q12753 694 aaKnown RBP10.43□□□□□ -0.74
ATG3YNR007C RSE1Q04693 1361 aaKnown RBP10.42□□□□□ -0.74
ATG3YNR007C AVT3P36062 692 aa10.39□□□□□ -0.75
ATG3YNR007C BFR2Q06631 534 aaKnown RBP10.24□□□□□ -0.77
ATG3YNR007C RPL17AP05740 184 aaKnown RBP10.08□□□□□ -0.8
ATG3YNR007C RPL17BP46990 184 aaKnown RBP10.08□□□□□ -0.8
ATG3YNR007C MRPL32P25348 183 aa10.07□□□□□ -0.8
ATG3YNR007C REB1P21538 810 aa10.04□□□□□ -0.8
ATG3YNR007C YGL015CP33199 130 aa9.67□□□□□ -0.86
ATG3YNR007C SPT21P35209 758 aa9.63□□□□□ -0.87
ATG3YNR007C CDC27P38042 758 aa9.53□□□□□ -0.88
ATG3YNR007C YKR023WP36119 530 aaKnown RBP9.52□□□□□ -0.89
ATG3YNR007C TFC8Q12308 588 aa9.34□□□□□ -0.91
ATG3YNR007C RIM101P33400 625 aa9.33□□□□□ -0.92
ATG3YNR007C HOP09932 586 aa9.32□□□□□ -0.92
ATG3YNR007C UBP10P53874 792 aaPredicted RBP9.31□□□□□ -0.92
ATG3YNR007C DCD1P06773 312 aa9.26□□□□□ -0.93
ATG3YNR007C MAP2P38174 421 aaKnown RBP9.24□□□□□ -0.93
ATG3YNR007C SCY1P53009 804 aa9.07□□□□□ -0.96
ATG3YNR007C BCH2P36122 765 aa9.03□□□□□ -0.96
ATG3YNR007C TFA1P36100 482 aa9.02□□□□□ -0.97
ATG3YNR007C OXP1P28273 1286 aa8.99□□□□□ -0.97
ATG3YNR007C SLX5P32828 619 aaKnown RBP8.98□□□□□ -0.97
ATG3YNR007C TIF4632P39936 914 aaKnown RBP8.94□□□□□ -0.98
ATG3YNR007C YIL055CP40523 627 aaKnown RBP8.9□□□□□ -0.98
ATG3YNR007C TGL3P40308 642 aa8.89□□□□□ -0.99
ATG3YNR007C PTP3P40048 928 aa8.87□□□□□ -0.99
ATG3YNR007C BUD31P25337 157 aaPredicted RBP8.83□□□□□ -1
ATG3YNR007C EPS1P40557 701 aa8.81□□□□□ -1
ATG3YNR007C BDF1P35817 686 aa8.78□□□□□ -1
ATG3YNR007C RSM7P47150 247 aa8.75□□□□□ -1.01
ATG3YNR007C YAH1Q12184 172 aaKnown RBP8.73□□□□□ -1.01
ATG3YNR007C BBC1P47068 1157 aa8.69□□□□□ -1.02
ATG3YNR007C AI2P03876 854 aa8.66□□□□□ -1.02
ATG3YNR007C UBP9P39967 754 aa8.63□□□□□ -1.03
ATG3YNR007C YLR271WQ06152 274 aa8.59□□□□□ -1.03
ATG3YNR007C MST1P07236 462 aa8.52□□□□□ -1.05
ATG3YNR007C NSR1P27476 414 aaKnown RBP RIP-Chip data8.52□□□□□ -1.05not detected
ATG3YNR007C SSP1P38871 571 aa8.51□□□□□ -1.05
ATG3YNR007C YOR238WQ08634 303 aa8.5□□□□□ -1.05
ATG3YNR007C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.48□□□□□ -1.05not detected
ATG3YNR007C PSD2P53037 1138 aaKnown RBP8.47□□□□□ -1.05
ATG3YNR007C YAP5P40574 245 aa8.44□□□□□ -1.06
ATG3YNR007C SIS1P25294 352 aaKnown RBP8.41□□□□□ -1.06
ATG3YNR007C MRM1P25270 412 aa8.35□□□□□ -1.07
ATG3YNR007C YBL029C-AQ3E756 94 aa8.34□□□□□ -1.07
ATG3YNR007C MGA2P40578 1113 aa8.31□□□□□ -1.08
ATG3YNR007C VNX1P42839 908 aa8.28□□□□□ -1.08
ATG3YNR007C CST9Q06032 482 aa8.28□□□□□ -1.08
ATG3YNR007C GTT3P39996 337 aa8.25□□□□□ -1.09
ATG3YNR007C WSC3Q12215 556 aa8.23□□□□□ -1.09
ATG3YNR007C SPP1Q03012 353 aa8.21□□□□□ -1.1
ATG3YNR007C RTG3P38165 486 aa8.2□□□□□ -1.1
ATG3YNR007C PIB1Q06651 286 aa8.2□□□□□ -1.1
ATG3YNR007C YMR1P47147 688 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
ATG3YNR007C VPS29P38759 282 aa8.16□□□□□ -1.1
ATG3YNR007C TIF11P38912 153 aaKnown RBP8.15□□□□□ -1.1
ATG3YNR007C DBP1P24784 617 aaKnown RBP8.12□□□□□ -1.11
ATG3YNR007C STS1P38637 319 aa8.07□□□□□ -1.12
ATG3YNR007C YFR006WP43590 535 aa8.07□□□□□ -1.12
ATG3YNR007C MSB4Q12317 492 aa8.07□□□□□ -1.12
ATG3YNR007C RCR1P38212 213 aa8.06□□□□□ -1.12
ATG3YNR007C ULI1P43604 169 aa8.05□□□□□ -1.12
ATG3YNR007C VMA1P17255 1071 aaKnown RBP8.03□□□□□ -1.12
ATG3YNR007C EAP1P36041 632 aaKnown RBP8.03□□□□□ -1.12
ATG3YNR007C YOL036WQ08206 761 aa8.02□□□□□ -1.13
ATG3YNR007C IOC2Q12072 812 aa8.02□□□□□ -1.13
ATG3YNR007C LDB19Q12502 818 aa8.02□□□□□ -1.13
ATG3YNR007C FKH1P40466 484 aa8.01□□□□□ -1.13
ATG3YNR007C SET4P42948 560 aa8□□□□□ -1.13
ATG3YNR007C AIR2Q12476 344 aaKnown RBP8□□□□□ -1.13
ATG3YNR007C SAM3Q08986 587 aa7.99□□□□□ -1.13
ATG3YNR007C YJL171CP46992 396 aa7.96□□□□□ -1.14
ATG3YNR007C TRP5P00931 707 aaKnown RBP7.93□□□□□ -1.14
ATG3YNR007C ABP1P15891 592 aaKnown RBP7.89□□□□□ -1.15
ATG3YNR007C RTG1P32607 177 aa7.88□□□□□ -1.15
ATG3YNR007C GYP5Q12344 894 aa7.88□□□□□ -1.15
ATG3YNR007C YNL035CP53962 389 aaKnown RBP7.87□□□□□ -1.15
ATG3YNR007C MAK11P20484 414 aaKnown RBP7.86□□□□□ -1.15
ATG3YNR007C RAM2P29703 316 aa7.86□□□□□ -1.15
ATG3YNR007C SEC61P32915 480 aa7.85□□□□□ -1.15
ATG3YNR007C NCR1Q12200 1170 aa7.85□□□□□ -1.15
ATG3YNR007C BMT6Q12291 365 aa7.85□□□□□ -1.15
ATG3YNR007C HTA1P04911 132 aaKnown RBP7.82□□□□□ -1.16
ATG3YNR007C HTA2P04912 132 aa7.82□□□□□ -1.16
ATG3YNR007C JIP4Q03361 876 aa7.82□□□□□ -1.16
ATG3YNR007C MIF2P35201 549 aa7.8□□□□□ -1.16
ATG3YNR007C DCW1P36091 449 aa7.8□□□□□ -1.16
ATG3YNR007C TFG1P41895 735 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms