RNA–Protein interactions for RNA: YNL326C

PFA3, Transcript of Palmitoyltransferase for Vac8p, yeastyeast

Gene PFA3, Length 1,011 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFA3YNL326C MTC1P47018 478 aaKnown RBP14.34□□□□□ -0.11
PFA3YNL326C DRS1P32892 752 aaKnown RBP13.64□□□□□ -0.23
PFA3YNL326C FAP1P53971 965 aa12.75□□□□□ -0.37
PFA3YNL326C PRY3P47033 881 aa12.09□□□□□ -0.47
PFA3YNL326C PRI1P10363 409 aa11.93□□□□□ -0.5
PFA3YNL326C ISW2Q08773 1120 aa11.88□□□□□ -0.51
PFA3YNL326C DIP2Q12220 943 aaPredicted RBP11.87□□□□□ -0.51
PFA3YNL326C AAD16Q02895 342 aa11.84□□□□□ -0.51
PFA3YNL326C RPG1P38249 964 aaKnown RBP11.68□□□□□ -0.54
PFA3YNL326C AVT3P36062 692 aa11.5□□□□□ -0.57
PFA3YNL326C YCK3P39962 524 aa11.5□□□□□ -0.57
PFA3YNL326C BFR2Q06631 534 aaKnown RBP11.49□□□□□ -0.57
PFA3YNL326C RSE1Q04693 1361 aaKnown RBP11.43□□□□□ -0.58
PFA3YNL326C TSR3Q12094 313 aaKnown RBP11.26□□□□□ -0.61
PFA3YNL326C HAA1Q12753 694 aaKnown RBP11.16□□□□□ -0.62
PFA3YNL326C RPL17AP05740 184 aaKnown RBP11.02□□□□□ -0.65
PFA3YNL326C RPL17BP46990 184 aaKnown RBP11.02□□□□□ -0.65
PFA3YNL326C REB1P21538 810 aa10.99□□□□□ -0.65
PFA3YNL326C MRPL32P25348 183 aa10.89□□□□□ -0.67
PFA3YNL326C SPT21P35209 758 aa10.56□□□□□ -0.72
PFA3YNL326C YGL015CP33199 130 aa10.37□□□□□ -0.75
PFA3YNL326C YKR023WP36119 530 aaKnown RBP10.36□□□□□ -0.75
PFA3YNL326C CDC27P38042 758 aa10.32□□□□□ -0.76
PFA3YNL326C TFA1P36100 482 aa10.3□□□□□ -0.76
PFA3YNL326C RIM101P33400 625 aa10.25□□□□□ -0.77
PFA3YNL326C TFC8Q12308 588 aa10.17□□□□□ -0.78
PFA3YNL326C HOP09932 586 aa10.14□□□□□ -0.79
PFA3YNL326C UBP10P53874 792 aaPredicted RBP10.09□□□□□ -0.79
PFA3YNL326C DCD1P06773 312 aa10.06□□□□□ -0.8
PFA3YNL326C MAP2P38174 421 aaKnown RBP9.98□□□□□ -0.81
PFA3YNL326C BUD31P25337 157 aaPredicted RBP9.96□□□□□ -0.82
PFA3YNL326C OXP1P28273 1286 aa9.87□□□□□ -0.83
PFA3YNL326C SCY1P53009 804 aa9.85□□□□□ -0.83
PFA3YNL326C BCH2P36122 765 aa9.83□□□□□ -0.84
PFA3YNL326C YIL055CP40523 627 aaKnown RBP9.81□□□□□ -0.84
PFA3YNL326C PTP3P40048 928 aa9.79□□□□□ -0.84
PFA3YNL326C SLX5P32828 619 aaKnown RBP9.74□□□□□ -0.85
PFA3YNL326C TIF4632P39936 914 aaKnown RBP9.7□□□□□ -0.86
PFA3YNL326C YAH1Q12184 172 aaKnown RBP9.65□□□□□ -0.86
PFA3YNL326C RSM7P47150 247 aa9.64□□□□□ -0.87
PFA3YNL326C EPS1P40557 701 aa9.63□□□□□ -0.87
PFA3YNL326C TGL3P40308 642 aa9.62□□□□□ -0.87
PFA3YNL326C BDF1P35817 686 aa9.57□□□□□ -0.88
PFA3YNL326C BBC1P47068 1157 aa9.57□□□□□ -0.88
PFA3YNL326C AI2P03876 854 aa9.53□□□□□ -0.88
PFA3YNL326C YLR271WQ06152 274 aa9.49□□□□□ -0.89
PFA3YNL326C SSP1P38871 571 aa9.47□□□□□ -0.89
PFA3YNL326C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.46□□□□□ -0.9not detected
PFA3YNL326C PSD2P53037 1138 aaKnown RBP9.35□□□□□ -0.91
PFA3YNL326C SGS1P35187 1447 aa9.31□□□□□ -0.92
PFA3YNL326C NSR1P27476 414 aaKnown RBP RIP-Chip data9.31□□□□□ -0.92not detected
PFA3YNL326C SIS1P25294 352 aaKnown RBP9.3□□□□□ -0.92
PFA3YNL326C UBP9P39967 754 aa9.28□□□□□ -0.92
PFA3YNL326C MGA2P40578 1113 aa9.25□□□□□ -0.93
PFA3YNL326C YOR238WQ08634 303 aa9.24□□□□□ -0.93
PFA3YNL326C YAP5P40574 245 aa9.23□□□□□ -0.93
PFA3YNL326C MST1P07236 462 aa9.22□□□□□ -0.93
PFA3YNL326C MRM1P25270 412 aa9.19□□□□□ -0.94
PFA3YNL326C SPA2P23201 1466 aaKnown RBP9.19□□□□□ -0.94
PFA3YNL326C CST9Q06032 482 aa9.15□□□□□ -0.94
PFA3YNL326C INO80P53115 1489 aa9.08□□□□□ -0.96
PFA3YNL326C RTG3P38165 486 aa9.05□□□□□ -0.96
PFA3YNL326C SSN2P38931 1420 aa9.05□□□□□ -0.96
PFA3YNL326C GTT3P39996 337 aa9.02□□□□□ -0.97
PFA3YNL326C YBL029C-AQ3E756 94 aa9.01□□□□□ -0.97
PFA3YNL326C YMR1P47147 688 aaKnown RBP RIP-Chip data8.99□□□□□ -0.97not detected
PFA3YNL326C VPS29P38759 282 aa8.96□□□□□ -0.98
PFA3YNL326C PIB1Q06651 286 aa8.95□□□□□ -0.98
PFA3YNL326C VNX1P42839 908 aa8.94□□□□□ -0.98
PFA3YNL326C WSC3Q12215 556 aa8.93□□□□□ -0.98
PFA3YNL326C DBP1P24784 617 aaKnown RBP8.91□□□□□ -0.98
PFA3YNL326C RCR1P38212 213 aa8.9□□□□□ -0.98
PFA3YNL326C SPP1Q03012 353 aa8.89□□□□□ -0.99
PFA3YNL326C STS1P38637 319 aa8.87□□□□□ -0.99
PFA3YNL326C YFR006WP43590 535 aa8.85□□□□□ -0.99
PFA3YNL326C TIF11P38912 153 aaKnown RBP8.83□□□□□ -1
PFA3YNL326C MSB4Q12317 492 aa8.83□□□□□ -1
PFA3YNL326C VMA1P17255 1071 aaKnown RBP8.82□□□□□ -1
PFA3YNL326C TCB3Q03640 1545 aaKnown RBP8.79□□□□□ -1
PFA3YNL326C EAP1P36041 632 aaKnown RBP8.77□□□□□ -1.01
PFA3YNL326C YOL036WQ08206 761 aa8.77□□□□□ -1.01
PFA3YNL326C SAM3Q08986 587 aa8.76□□□□□ -1.01
PFA3YNL326C MAK11P20484 414 aaKnown RBP8.74□□□□□ -1.01
PFA3YNL326C ULI1P43604 169 aa8.74□□□□□ -1.01
PFA3YNL326C RAM2P29703 316 aa8.73□□□□□ -1.01
PFA3YNL326C SET4P42948 560 aa8.73□□□□□ -1.01
PFA3YNL326C ABP1P15891 592 aaKnown RBP8.7□□□□□ -1.02
PFA3YNL326C IOC2Q12072 812 aa8.68□□□□□ -1.02
PFA3YNL326C LDB19Q12502 818 aa8.67□□□□□ -1.02
PFA3YNL326C FKH1P40466 484 aa8.66□□□□□ -1.02
PFA3YNL326C GYP5Q12344 894 aa8.65□□□□□ -1.02
PFA3YNL326C TRP5P00931 707 aaKnown RBP8.64□□□□□ -1.03
PFA3YNL326C MIF2P35201 549 aa8.63□□□□□ -1.03
PFA3YNL326C AIR2Q12476 344 aaKnown RBP8.61□□□□□ -1.03
PFA3YNL326C GRE2Q12068 342 aaKnown RBP8.6□□□□□ -1.03
PFA3YNL326C HTA1P04911 132 aaKnown RBP8.58□□□□□ -1.04
PFA3YNL326C HTA2P04912 132 aa8.58□□□□□ -1.04
PFA3YNL326C COQ8P27697 501 aa8.58□□□□□ -1.04
PFA3YNL326C YJL171CP46992 396 aa8.58□□□□□ -1.04
PFA3YNL326C TY1B-DR4Q07793 1604 aa8.58□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms