RNA–Protein interactions for RNA: YNL286W

CUS2, Transcript of Putative checkpoint factor in transcription, yeastyeast

Gene CUS2, Length 858 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS2YNL286W MTC1P47018 478 aaKnown RBP19.41■□□□□ 0.7
CUS2YNL286W FAP1P53971 965 aa18.53■□□□□ 0.56
CUS2YNL286W PRY3P47033 881 aa17.47■□□□□ 0.39
CUS2YNL286W DRS1P32892 752 aaKnown RBP17.16■□□□□ 0.34
CUS2YNL286W AAD16Q02895 342 aa16.93■□□□□ 0.3
CUS2YNL286W PRI1P10363 409 aa16.91■□□□□ 0.3
CUS2YNL286W YCK3P39962 524 aa16.58■□□□□ 0.24
CUS2YNL286W HAA1Q12753 694 aaKnown RBP16.31■□□□□ 0.2
CUS2YNL286W ISW2Q08773 1120 aa16.25■□□□□ 0.19
CUS2YNL286W RPG1P38249 964 aaKnown RBP16.17■□□□□ 0.18
CUS2YNL286W TSR3Q12094 313 aaKnown RBP15.96■□□□□ 0.15
CUS2YNL286W DIP2Q12220 943 aaPredicted RBP15.4■□□□□ 0.06
CUS2YNL286W MRPL32P25348 183 aa15.28■□□□□ 0.04
CUS2YNL286W RSE1Q04693 1361 aaKnown RBP15.13■□□□□ 0.01
CUS2YNL286W YGL015CP33199 130 aa14.92□□□□□ -0.02
CUS2YNL286W RPL17AP05740 184 aaKnown RBP14.75□□□□□ -0.05
CUS2YNL286W RPL17BP46990 184 aaKnown RBP14.75□□□□□ -0.05
CUS2YNL286W REB1P21538 810 aa14.72□□□□□ -0.05
CUS2YNL286W AVT3P36062 692 aa14.59□□□□□ -0.07
CUS2YNL286W CDC27P38042 758 aa14.42□□□□□ -0.1
CUS2YNL286W YKR023WP36119 530 aaKnown RBP14.15□□□□□ -0.14
CUS2YNL286W BUD31P25337 157 aaPredicted RBP14.11□□□□□ -0.15
CUS2YNL286W SPT21P35209 758 aa14.06□□□□□ -0.16
CUS2YNL286W MAP2P38174 421 aaKnown RBP14.06□□□□□ -0.16
CUS2YNL286W UBP10P53874 792 aaPredicted RBP14.04□□□□□ -0.16
CUS2YNL286W HOP09932 586 aa13.86□□□□□ -0.19
CUS2YNL286W DCD1P06773 312 aa13.83□□□□□ -0.2
CUS2YNL286W TFC8Q12308 588 aa13.83□□□□□ -0.2
CUS2YNL286W BFR2Q06631 534 aaKnown RBP13.79□□□□□ -0.2
CUS2YNL286W SCY1P53009 804 aa13.59□□□□□ -0.23
CUS2YNL286W TGL3P40308 642 aa13.46□□□□□ -0.25
CUS2YNL286W TIF4632P39936 914 aaKnown RBP13.45□□□□□ -0.26
CUS2YNL286W SLX5P32828 619 aaKnown RBP13.43□□□□□ -0.26
CUS2YNL286W BCH2P36122 765 aa13.36□□□□□ -0.27
CUS2YNL286W RIM101P33400 625 aa13.35□□□□□ -0.27
CUS2YNL286W SIS1P25294 352 aaKnown RBP13.33□□□□□ -0.28
CUS2YNL286W UBP9P39967 754 aa13.28□□□□□ -0.28
CUS2YNL286W EPS1P40557 701 aa12.93□□□□□ -0.34
CUS2YNL286W OXP1P28273 1286 aa12.92□□□□□ -0.34
CUS2YNL286W BDF1P35817 686 aa12.92□□□□□ -0.34
CUS2YNL286W MST1P07236 462 aa12.81□□□□□ -0.36
CUS2YNL286W YBL029C-AQ3E756 94 aa12.74□□□□□ -0.37
CUS2YNL286W YOR238WQ08634 303 aa12.67□□□□□ -0.38
CUS2YNL286W PTP3P40048 928 aa12.66□□□□□ -0.38
CUS2YNL286W YIL055CP40523 627 aaKnown RBP12.64□□□□□ -0.39
CUS2YNL286W VNX1P42839 908 aa12.57□□□□□ -0.4
CUS2YNL286W NSR1P27476 414 aaKnown RBP RIP-Chip data12.55□□□□□ -0.4not detected
CUS2YNL286W RSM7P47150 247 aa12.49□□□□□ -0.41
CUS2YNL286W BBC1P47068 1157 aa12.47□□□□□ -0.41
CUS2YNL286W AI2P03876 854 aa12.46□□□□□ -0.41
CUS2YNL286W YAP5P40574 245 aa12.45□□□□□ -0.42
CUS2YNL286W SPP1Q03012 353 aa12.43□□□□□ -0.42
CUS2YNL286W WSC3Q12215 556 aa12.41□□□□□ -0.42
CUS2YNL286W YAH1Q12184 172 aaKnown RBP12.35□□□□□ -0.43
CUS2YNL286W AIR2Q12476 344 aaKnown RBP12.29□□□□□ -0.44
CUS2YNL286W TIF11P38912 153 aaKnown RBP12.25□□□□□ -0.45
CUS2YNL286W FKH1P40466 484 aa12.21□□□□□ -0.45
CUS2YNL286W GTT3P39996 337 aa12.18□□□□□ -0.46
CUS2YNL286W YJL171CP46992 396 aa12.15□□□□□ -0.46
CUS2YNL286W YLR271WQ06152 274 aa12.14□□□□□ -0.47
CUS2YNL286W PIB1Q06651 286 aa12.1□□□□□ -0.47
CUS2YNL286W LDB19Q12502 818 aa12.07□□□□□ -0.48
CUS2YNL286W IOC2Q12072 812 aa12.06□□□□□ -0.48
CUS2YNL286W ULI1P43604 169 aa12.05□□□□□ -0.48
CUS2YNL286W PSD2P53037 1138 aaKnown RBP12.05□□□□□ -0.48
CUS2YNL286W MRM1P25270 412 aa11.96□□□□□ -0.49
CUS2YNL286W BMT6Q12291 365 aa11.94□□□□□ -0.5
CUS2YNL286W MSB4Q12317 492 aa11.86□□□□□ -0.51
CUS2YNL286W EAP1P36041 632 aaKnown RBP11.8□□□□□ -0.52
CUS2YNL286W SET4P42948 560 aa11.8□□□□□ -0.52
CUS2YNL286W YOL036WQ08206 761 aa11.8□□□□□ -0.52
CUS2YNL286W RTG1P32607 177 aa11.78□□□□□ -0.52
CUS2YNL286W TRP5P00931 707 aaKnown RBP11.77□□□□□ -0.53
CUS2YNL286W TFA1P36100 482 aa11.76□□□□□ -0.53
CUS2YNL286W VPS29P38759 282 aa11.75□□□□□ -0.53
CUS2YNL286W DBP1P24784 617 aaKnown RBP11.73□□□□□ -0.53
CUS2YNL286W NCR1Q12200 1170 aa11.73□□□□□ -0.53
CUS2YNL286W YMR1P47147 688 aaKnown RBP RIP-Chip data11.72□□□□□ -0.53not detected
CUS2YNL286W YFR006WP43590 535 aa11.7□□□□□ -0.54
CUS2YNL286W SSP1P38871 571 aa11.69□□□□□ -0.54
CUS2YNL286W CST9Q06032 482 aa11.67□□□□□ -0.54
CUS2YNL286W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.66□□□□□ -0.54not detected
CUS2YNL286W YNL035CP53962 389 aaKnown RBP11.65□□□□□ -0.54
CUS2YNL286W VMA1P17255 1071 aaKnown RBP11.64□□□□□ -0.55
CUS2YNL286W STS1P38637 319 aa11.64□□□□□ -0.55
CUS2YNL286W SEC61P32915 480 aa11.62□□□□□ -0.55
CUS2YNL286W RTG3P38165 486 aa11.61□□□□□ -0.55
CUS2YNL286W SAM3Q08986 587 aa11.6□□□□□ -0.55
CUS2YNL286W RCR1P38212 213 aa11.51□□□□□ -0.57
CUS2YNL286W MGA2P40578 1113 aa11.51□□□□□ -0.57
CUS2YNL286W DAN4P47179 1161 aa11.49□□□□□ -0.57
CUS2YNL286W SAP30P38429 201 aa11.45□□□□□ -0.58
CUS2YNL286W TFG1P41895 735 aaPredicted RBP11.45□□□□□ -0.58
CUS2YNL286W JIP4Q03361 876 aa11.4□□□□□ -0.58
CUS2YNL286W GYP5Q12344 894 aa11.39□□□□□ -0.59
CUS2YNL286W YDL129WQ07555 291 aa11.36□□□□□ -0.59
CUS2YNL286W BCK2P33306 851 aa11.33□□□□□ -0.6
CUS2YNL286W DCW1P36091 449 aa11.33□□□□□ -0.6
CUS2YNL286W ABP1P15891 592 aaKnown RBP11.32□□□□□ -0.6
CUS2YNL286W HTA1P04911 132 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms