RNA–Protein interactions for RNA: YNL260C

LTO1, Transcript of Essential protein that forms a complex with Rli1p and Yae1p, yeastyeast

Gene LTO1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LTO1YNL260C MTC1P47018 478 aaKnown RBP15.69■□□□□ 0.1
LTO1YNL260C FAP1P53971 965 aa15.38■□□□□ 0.05
LTO1YNL260C PRY3P47033 881 aa14.49□□□□□ -0.09
LTO1YNL260C DRS1P32892 752 aaKnown RBP14.22□□□□□ -0.13
LTO1YNL260C AAD16Q02895 342 aa13.85□□□□□ -0.19
LTO1YNL260C PRI1P10363 409 aa13.78□□□□□ -0.2
LTO1YNL260C YCK3P39962 524 aa13.55□□□□□ -0.24
LTO1YNL260C HAA1Q12753 694 aaKnown RBP13.5□□□□□ -0.25
LTO1YNL260C ISW2Q08773 1120 aa13.21□□□□□ -0.29
LTO1YNL260C RPG1P38249 964 aaKnown RBP13.1□□□□□ -0.31
LTO1YNL260C TSR3Q12094 313 aaKnown RBP12.99□□□□□ -0.33
LTO1YNL260C DIP2Q12220 943 aaPredicted RBP12.62□□□□□ -0.39
LTO1YNL260C MRPL32P25348 183 aa12.5□□□□□ -0.41
LTO1YNL260C RSE1Q04693 1361 aaKnown RBP12.31□□□□□ -0.44
LTO1YNL260C YGL015CP33199 130 aa12.3□□□□□ -0.44
LTO1YNL260C BFR2Q06631 534 aaKnown RBP12.28□□□□□ -0.44
LTO1YNL260C AVT3P36062 692 aa12.04□□□□□ -0.48
LTO1YNL260C RPL17AP05740 184 aaKnown RBP11.96□□□□□ -0.49
LTO1YNL260C RPL17BP46990 184 aaKnown RBP11.96□□□□□ -0.49
LTO1YNL260C REB1P21538 810 aa11.94□□□□□ -0.5
LTO1YNL260C TFA1P36100 482 aa11.76□□□□□ -0.53
LTO1YNL260C BUD31P25337 157 aaPredicted RBP11.74□□□□□ -0.53
LTO1YNL260C CDC27P38042 758 aa11.63□□□□□ -0.55
LTO1YNL260C UBP10P53874 792 aaPredicted RBP11.45□□□□□ -0.58
LTO1YNL260C SPT21P35209 758 aa11.43□□□□□ -0.58
LTO1YNL260C MAP2P38174 421 aaKnown RBP11.42□□□□□ -0.58
LTO1YNL260C YKR023WP36119 530 aaKnown RBP11.38□□□□□ -0.59
LTO1YNL260C HOP09932 586 aa11.15□□□□□ -0.62
LTO1YNL260C TFC8Q12308 588 aa11.15□□□□□ -0.62
LTO1YNL260C DCD1P06773 312 aa11.12□□□□□ -0.63
LTO1YNL260C SIS1P25294 352 aaKnown RBP11.12□□□□□ -0.63
LTO1YNL260C TIF4632P39936 914 aaKnown RBP11.04□□□□□ -0.64
LTO1YNL260C UBP9P39967 754 aa11.02□□□□□ -0.65
LTO1YNL260C SCY1P53009 804 aa11□□□□□ -0.65
LTO1YNL260C TGL3P40308 642 aa10.97□□□□□ -0.65
LTO1YNL260C SLX5P32828 619 aaKnown RBP10.93□□□□□ -0.66
LTO1YNL260C RIM101P33400 625 aa10.92□□□□□ -0.66
LTO1YNL260C BCH2P36122 765 aa10.77□□□□□ -0.69
LTO1YNL260C OXP1P28273 1286 aa10.54□□□□□ -0.72
LTO1YNL260C EPS1P40557 701 aa10.47□□□□□ -0.73
LTO1YNL260C RQC2Q12532 1038 aaKnown RBP10.47□□□□□ -0.73
LTO1YNL260C BDF1P35817 686 aa10.44□□□□□ -0.74
LTO1YNL260C YBL029C-AQ3E756 94 aa10.41□□□□□ -0.74
LTO1YNL260C PTP3P40048 928 aa10.4□□□□□ -0.74
LTO1YNL260C YIL055CP40523 627 aaKnown RBP10.37□□□□□ -0.75
LTO1YNL260C MST1P07236 462 aa10.35□□□□□ -0.75
LTO1YNL260C YOR238WQ08634 303 aa10.3□□□□□ -0.76
LTO1YNL260C VNX1P42839 908 aa10.23□□□□□ -0.77
LTO1YNL260C RSM7P47150 247 aa10.23□□□□□ -0.77
LTO1YNL260C BBC1P47068 1157 aa10.21□□□□□ -0.77
LTO1YNL260C AI2P03876 854 aa10.17□□□□□ -0.78
LTO1YNL260C SPP1Q03012 353 aa10.17□□□□□ -0.78
LTO1YNL260C YAH1Q12184 172 aaKnown RBP10.17□□□□□ -0.78
LTO1YNL260C NSR1P27476 414 aaKnown RBP RIP-Chip data10.16□□□□□ -0.78not detected
LTO1YNL260C WSC3Q12215 556 aa10.1□□□□□ -0.79
LTO1YNL260C YAP5P40574 245 aa10.07□□□□□ -0.8
LTO1YNL260C YJL171CP46992 396 aa10.06□□□□□ -0.8
LTO1YNL260C AIR2Q12476 344 aaKnown RBP10.03□□□□□ -0.8
LTO1YNL260C YLR271WQ06152 274 aa9.98□□□□□ -0.81
LTO1YNL260C TIF11P38912 153 aaKnown RBP9.97□□□□□ -0.81
LTO1YNL260C FKH1P40466 484 aa9.96□□□□□ -0.82
LTO1YNL260C GTT3P39996 337 aa9.92□□□□□ -0.82
LTO1YNL260C DMA1P38823 416 aa9.91□□□□□ -0.82
LTO1YNL260C PSD2P53037 1138 aaKnown RBP9.9□□□□□ -0.82
LTO1YNL260C SSP1P38871 571 aa9.86□□□□□ -0.83
LTO1YNL260C LDB19Q12502 818 aa9.84□□□□□ -0.83
LTO1YNL260C BMT6Q12291 365 aa9.81□□□□□ -0.84
LTO1YNL260C MRM1P25270 412 aa9.79□□□□□ -0.84
LTO1YNL260C ULI1P43604 169 aa9.79□□□□□ -0.84
LTO1YNL260C PIB1Q06651 286 aa9.77□□□□□ -0.85
LTO1YNL260C IOC2Q12072 812 aa9.75□□□□□ -0.85
LTO1YNL260C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.73□□□□□ -0.85not detected
LTO1YNL260C MSB4Q12317 492 aa9.62□□□□□ -0.87
LTO1YNL260C CST9Q06032 482 aa9.61□□□□□ -0.87
LTO1YNL260C EAP1P36041 632 aaKnown RBP9.59□□□□□ -0.87
LTO1YNL260C VPS29P38759 282 aa9.58□□□□□ -0.88
LTO1YNL260C YMR1P47147 688 aaKnown RBP RIP-Chip data9.58□□□□□ -0.88not detected
LTO1YNL260C RTG1P32607 177 aa9.56□□□□□ -0.88
LTO1YNL260C MGA2P40578 1113 aa9.56□□□□□ -0.88
LTO1YNL260C YOL036WQ08206 761 aa9.56□□□□□ -0.88
LTO1YNL260C DBP1P24784 617 aaKnown RBP9.55□□□□□ -0.88
LTO1YNL260C RTG3P38165 486 aa9.54□□□□□ -0.88
LTO1YNL260C SET4P42948 560 aa9.54□□□□□ -0.88
LTO1YNL260C NCR1Q12200 1170 aa9.53□□□□□ -0.88
LTO1YNL260C YFR006WP43590 535 aa9.52□□□□□ -0.89
LTO1YNL260C TRP5P00931 707 aaKnown RBP9.5□□□□□ -0.89
LTO1YNL260C STS1P38637 319 aa9.5□□□□□ -0.89
LTO1YNL260C VMA1P17255 1071 aaKnown RBP9.48□□□□□ -0.89
LTO1YNL260C YNL035CP53962 389 aaKnown RBP9.44□□□□□ -0.9
LTO1YNL260C SAM3Q08986 587 aa9.44□□□□□ -0.9
LTO1YNL260C SEC61P32915 480 aa9.42□□□□□ -0.9
LTO1YNL260C RCR1P38212 213 aa9.42□□□□□ -0.9
LTO1YNL260C TFG1P41895 735 aaPredicted RBP9.36□□□□□ -0.91
LTO1YNL260C BCK2P33306 851 aa9.3□□□□□ -0.92
LTO1YNL260C ABP1P15891 592 aaKnown RBP9.29□□□□□ -0.92
LTO1YNL260C SAP30P38429 201 aa9.29□□□□□ -0.92
LTO1YNL260C GYP5Q12344 894 aa9.28□□□□□ -0.92
LTO1YNL260C DAN4P47179 1161 aa9.26□□□□□ -0.93
LTO1YNL260C JIP4Q03361 876 aa9.25□□□□□ -0.93
LTO1YNL260C HTA1P04911 132 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms