RNA–Protein interactions for RNA: YNL147W

LSM7, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM7, Length 348 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM7YNL147W FAP1P53971 965 aa9.95□□□□□ -0.82
LSM7YNL147W PRY3P47033 881 aa9.38□□□□□ -0.91
LSM7YNL147W MTC1P47018 478 aaKnown RBP9.27□□□□□ -0.93
LSM7YNL147W HAA1Q12753 694 aaKnown RBP8.83□□□□□ -1
LSM7YNL147W AAD16Q02895 342 aa8.78□□□□□ -1
LSM7YNL147W YCK3P39962 524 aa8.73□□□□□ -1.01
LSM7YNL147W PRI1P10363 409 aa8.63□□□□□ -1.03
LSM7YNL147W ISW2Q08773 1120 aa8.06□□□□□ -1.12
LSM7YNL147W TSR3Q12094 313 aaKnown RBP8.01□□□□□ -1.13
LSM7YNL147W RPG1P38249 964 aaKnown RBP7.94□□□□□ -1.14
LSM7YNL147W YGL015CP33199 130 aa7.93□□□□□ -1.14
LSM7YNL147W BUD31P25337 157 aaPredicted RBP7.87□□□□□ -1.15
LSM7YNL147W MRPL32P25348 183 aa7.81□□□□□ -1.16
LSM7YNL147W SIS1P25294 352 aaKnown RBP7.36□□□□□ -1.23
LSM7YNL147W DRS1P32892 752 aaKnown RBP7.18□□□□□ -1.26
LSM7YNL147W UBP10P53874 792 aaPredicted RBP7.18□□□□□ -1.26
LSM7YNL147W UBP9P39967 754 aa7.17□□□□□ -1.26
LSM7YNL147W CDC27P38042 758 aa7.05□□□□□ -1.28
LSM7YNL147W RSE1Q04693 1361 aaKnown RBP7.05□□□□□ -1.28
LSM7YNL147W MAP2P38174 421 aaKnown RBP7.02□□□□□ -1.29
LSM7YNL147W REB1P21538 810 aa7.01□□□□□ -1.29
LSM7YNL147W TIF4632P39936 914 aaKnown RBP6.92□□□□□ -1.3
LSM7YNL147W TGL3P40308 642 aa6.9□□□□□ -1.3
LSM7YNL147W RPL17AP05740 184 aaKnown RBP6.87□□□□□ -1.31
LSM7YNL147W RPL17BP46990 184 aaKnown RBP6.87□□□□□ -1.31
LSM7YNL147W DIP2Q12220 943 aaPredicted RBP6.83□□□□□ -1.32
LSM7YNL147W YKR023WP36119 530 aaKnown RBP6.71□□□□□ -1.34
LSM7YNL147W SLX5P32828 619 aaKnown RBP6.7□□□□□ -1.34
LSM7YNL147W SCY1P53009 804 aa6.64□□□□□ -1.35
LSM7YNL147W TFC8Q12308 588 aa6.59□□□□□ -1.35
LSM7YNL147W HOP09932 586 aa6.54□□□□□ -1.36
LSM7YNL147W DCD1P06773 312 aa6.51□□□□□ -1.37
LSM7YNL147W YBL029C-AQ3E756 94 aa6.47□□□□□ -1.37
LSM7YNL147W SPT21P35209 758 aa6.46□□□□□ -1.38
LSM7YNL147W YJL171CP46992 396 aa6.45□□□□□ -1.38
LSM7YNL147W MST1P07236 462 aa6.43□□□□□ -1.38
LSM7YNL147W VNX1P42839 908 aa6.38□□□□□ -1.39
LSM7YNL147W AIR2Q12476 344 aaKnown RBP6.36□□□□□ -1.39
LSM7YNL147W SPP1Q03012 353 aa6.34□□□□□ -1.39
LSM7YNL147W YOR238WQ08634 303 aa6.33□□□□□ -1.4
LSM7YNL147W BCH2P36122 765 aa6.31□□□□□ -1.4
LSM7YNL147W FKH1P40466 484 aa6.3□□□□□ -1.4
LSM7YNL147W NSR1P27476 414 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
LSM7YNL147W BMT6Q12291 365 aa6.21□□□□□ -1.42
LSM7YNL147W AVT3P36062 692 aa6.18□□□□□ -1.42
LSM7YNL147W TIF11P38912 153 aaKnown RBP6.18□□□□□ -1.42
LSM7YNL147W WSC3Q12215 556 aa6.14□□□□□ -1.43
LSM7YNL147W YAP5P40574 245 aa6.09□□□□□ -1.43
LSM7YNL147W RGA2Q06407 1009 aa6.09□□□□□ -1.43
LSM7YNL147W BDF1P35817 686 aa6.07□□□□□ -1.44
LSM7YNL147W LDB19Q12502 818 aa6.07□□□□□ -1.44
LSM7YNL147W EPS1P40557 701 aa6.06□□□□□ -1.44
LSM7YNL147W GTT3P39996 337 aa5.99□□□□□ -1.45
LSM7YNL147W ULI1P43604 169 aa5.99□□□□□ -1.45
LSM7YNL147W IOC2Q12072 812 aa5.99□□□□□ -1.45
LSM7YNL147W RIM101P33400 625 aa5.95□□□□□ -1.46
LSM7YNL147W BFR2Q06631 534 aaKnown RBP5.91□□□□□ -1.46
LSM7YNL147W BCK2P33306 851 aa5.89□□□□□ -1.47
LSM7YNL147W EAP1P36041 632 aaKnown RBP5.88□□□□□ -1.47
LSM7YNL147W NCR1Q12200 1170 aa5.86□□□□□ -1.47
LSM7YNL147W MSB4Q12317 492 aa5.85□□□□□ -1.47
LSM7YNL147W RTG1P32607 177 aa5.84□□□□□ -1.47
LSM7YNL147W SEC61P32915 480 aa5.8□□□□□ -1.48
LSM7YNL147W RGA1P39083 1007 aa5.78□□□□□ -1.48
LSM7YNL147W BBC1P47068 1157 aa5.78□□□□□ -1.48
LSM7YNL147W YNL035CP53962 389 aaKnown RBP5.75□□□□□ -1.49
LSM7YNL147W CHL1P22516 861 aaPredicted RBP5.74□□□□□ -1.49
LSM7YNL147W TFG1P41895 735 aaPredicted RBP5.73□□□□□ -1.49
LSM7YNL147W TRP5P00931 707 aaKnown RBP5.7□□□□□ -1.5
LSM7YNL147W XDJ1P39102 459 aa5.68□□□□□ -1.5
LSM7YNL147W PTP3P40048 928 aa5.67□□□□□ -1.5
LSM7YNL147W YIL055CP40523 627 aaKnown RBP5.66□□□□□ -1.5
LSM7YNL147W TFA1P36100 482 aa5.65□□□□□ -1.5
LSM7YNL147W PRE3P38624 215 aa5.65□□□□□ -1.5
LSM7YNL147W OXP1P28273 1286 aa5.64□□□□□ -1.51
LSM7YNL147W SAP30P38429 201 aa5.63□□□□□ -1.51
LSM7YNL147W YOL036WQ08206 761 aa5.63□□□□□ -1.51
LSM7YNL147W AI2P03876 854 aa5.61□□□□□ -1.51
LSM7YNL147W SET4P42948 560 aa5.61□□□□□ -1.51
LSM7YNL147W DPS1P04802 557 aaKnown RBP5.6□□□□□ -1.51
LSM7YNL147W PIB1Q06651 286 aa5.6□□□□□ -1.51
LSM7YNL147W YDL129WQ07555 291 aa5.58□□□□□ -1.52
LSM7YNL147W VRP1P37370 817 aa5.55□□□□□ -1.52
LSM7YNL147W RSM7P47150 247 aa5.55□□□□□ -1.52
LSM7YNL147W JIP4Q03361 876 aa5.55□□□□□ -1.52
LSM7YNL147W DAN4P47179 1161 aa5.52□□□□□ -1.53
LSM7YNL147W ABP1P15891 592 aaKnown RBP5.45□□□□□ -1.54
LSM7YNL147W SRC1Q03707 834 aa5.44□□□□□ -1.54
LSM7YNL147W SAM3Q08986 587 aa5.44□□□□□ -1.54
LSM7YNL147W VMA1P17255 1071 aaKnown RBP5.38□□□□□ -1.55
LSM7YNL147W PTC4P38089 393 aa5.37□□□□□ -1.55
LSM7YNL147W YMR1P47147 688 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
LSM7YNL147W ELP4Q02884 456 aaKnown RBP5.35□□□□□ -1.55
LSM7YNL147W HTA1P04911 132 aaKnown RBP5.33□□□□□ -1.56
LSM7YNL147W HTA2P04912 132 aa5.33□□□□□ -1.56
LSM7YNL147W DBP1P24784 617 aaKnown RBP5.32□□□□□ -1.56
LSM7YNL147W MRM1P25270 412 aa5.3□□□□□ -1.56
LSM7YNL147W YEL023CP39992 682 aa5.3□□□□□ -1.56
LSM7YNL147W GYP5Q12344 894 aa5.28□□□□□ -1.56
LSM7YNL147W PSD2P53037 1138 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms