RNA–Protein interactions for RNA: YNL040W

YNL040W, Transcript of Putative protein of unknown function, yeastyeast

Gene YNL040W, Length 1,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL040WYNL040W MTC1P47018 478 aaKnown RBP19.6■□□□□ 0.73
YNL040WYNL040W DRS1P32892 752 aaKnown RBP18.18■□□□□ 0.5
YNL040WYNL040W FAP1P53971 965 aa17.73■□□□□ 0.43
YNL040WYNL040W PRY3P47033 881 aa16.67■□□□□ 0.26
YNL040WYNL040W PRI1P10363 409 aa16.57■□□□□ 0.24
YNL040WYNL040W AAD16Q02895 342 aa16.48■□□□□ 0.23
YNL040WYNL040W ISW2Q08773 1120 aa16.26■□□□□ 0.19
YNL040WYNL040W RPG1P38249 964 aaKnown RBP16.09■□□□□ 0.17
YNL040WYNL040W DIP2Q12220 943 aaPredicted RBP15.98■□□□□ 0.15
YNL040WYNL040W YCK3P39962 524 aa15.77■□□□□ 0.12
YNL040WYNL040W TSR3Q12094 313 aaKnown RBP15.65■□□□□ 0.1
YNL040WYNL040W HAA1Q12753 694 aaKnown RBP15.64■□□□□ 0.09
YNL040WYNL040W RSE1Q04693 1361 aaKnown RBP15.48■□□□□ 0.07
YNL040WYNL040W BFR2Q06631 534 aaKnown RBP15.46■□□□□ 0.07
YNL040WYNL040W AVT3P36062 692 aa15.38■□□□□ 0.05
YNL040WYNL040W MRPL32P25348 183 aa15.03■□□□□ -0
YNL040WYNL040W RPL17AP05740 184 aaKnown RBP15□□□□□ -0.01
YNL040WYNL040W RPL17BP46990 184 aaKnown RBP15□□□□□ -0.01
YNL040WYNL040W REB1P21538 810 aa14.94□□□□□ -0.02
YNL040WYNL040W YGL015CP33199 130 aa14.45□□□□□ -0.1
YNL040WYNL040W TFA1P36100 482 aa14.45□□□□□ -0.1
YNL040WYNL040W SPT21P35209 758 aa14.36□□□□□ -0.11
YNL040WYNL040W CDC27P38042 758 aa14.29□□□□□ -0.12
YNL040WYNL040W YKR023WP36119 530 aaKnown RBP14.22□□□□□ -0.13
YNL040WYNL040W HOP09932 586 aa13.93□□□□□ -0.18
YNL040WYNL040W TFC8Q12308 588 aa13.93□□□□□ -0.18
YNL040WYNL040W UBP10P53874 792 aaPredicted RBP13.9□□□□□ -0.18
YNL040WYNL040W DCD1P06773 312 aa13.86□□□□□ -0.19
YNL040WYNL040W MAP2P38174 421 aaKnown RBP13.85□□□□□ -0.19
YNL040WYNL040W RIM101P33400 625 aa13.83□□□□□ -0.19
YNL040WYNL040W SCY1P53009 804 aa13.55□□□□□ -0.24
YNL040WYNL040W BCH2P36122 765 aa13.46□□□□□ -0.25
YNL040WYNL040W SLX5P32828 619 aaKnown RBP13.38□□□□□ -0.27
YNL040WYNL040W OXP1P28273 1286 aa13.37□□□□□ -0.27
YNL040WYNL040W TIF4632P39936 914 aaKnown RBP13.32□□□□□ -0.28
YNL040WYNL040W BUD31P25337 157 aaPredicted RBP13.3□□□□□ -0.28
YNL040WYNL040W TGL3P40308 642 aa13.25□□□□□ -0.29
YNL040WYNL040W PTP3P40048 928 aa13.15□□□□□ -0.3
YNL040WYNL040W YIL055CP40523 627 aaKnown RBP13.15□□□□□ -0.3
YNL040WYNL040W EPS1P40557 701 aa13.12□□□□□ -0.31
YNL040WYNL040W BDF1P35817 686 aa13.07□□□□□ -0.32
YNL040WYNL040W RSM7P47150 247 aa12.96□□□□□ -0.33
YNL040WYNL040W YAH1Q12184 172 aaKnown RBP12.94□□□□□ -0.34
YNL040WYNL040W UBP9P39967 754 aa12.87□□□□□ -0.35
YNL040WYNL040W BBC1P47068 1157 aa12.87□□□□□ -0.35
YNL040WYNL040W AI2P03876 854 aa12.86□□□□□ -0.35
YNL040WYNL040W YLR271WQ06152 274 aa12.73□□□□□ -0.37
YNL040WYNL040W MST1P07236 462 aa12.69□□□□□ -0.38
YNL040WYNL040W NSR1P27476 414 aaKnown RBP RIP-Chip data12.67□□□□□ -0.38not detected
YNL040WYNL040W YOR238WQ08634 303 aa12.65□□□□□ -0.38
YNL040WYNL040W SIS1P25294 352 aaKnown RBP12.64□□□□□ -0.39
YNL040WYNL040W SSP1P38871 571 aa12.57□□□□□ -0.4
YNL040WYNL040W PSD2P53037 1138 aaKnown RBP12.56□□□□□ -0.4
YNL040WYNL040W YAP5P40574 245 aa12.56□□□□□ -0.4
YNL040WYNL040W YBL029C-AQ3E756 94 aa12.51□□□□□ -0.41
YNL040WYNL040W ARP8Q12386 881 aaKnown RBP RIP-Chip data12.47□□□□□ -0.41not detected
YNL040WYNL040W MRM1P25270 412 aa12.39□□□□□ -0.43
YNL040WYNL040W VNX1P42839 908 aa12.38□□□□□ -0.43
YNL040WYNL040W WSC3Q12215 556 aa12.3□□□□□ -0.44
YNL040WYNL040W CST9Q06032 482 aa12.29□□□□□ -0.44
YNL040WYNL040W GTT3P39996 337 aa12.27□□□□□ -0.45
YNL040WYNL040W MGA2P40578 1113 aa12.26□□□□□ -0.45
YNL040WYNL040W SPP1Q03012 353 aa12.26□□□□□ -0.45
YNL040WYNL040W PIB1Q06651 286 aa12.24□□□□□ -0.45
YNL040WYNL040W TIF11P38912 153 aaKnown RBP12.16□□□□□ -0.46
YNL040WYNL040W RTG3P38165 486 aa12.12□□□□□ -0.47
YNL040WYNL040W VPS29P38759 282 aa12.12□□□□□ -0.47
YNL040WYNL040W YMR1P47147 688 aaKnown RBP RIP-Chip data12.1□□□□□ -0.47not detected
YNL040WYNL040W DBP1P24784 617 aaKnown RBP12.05□□□□□ -0.48
YNL040WYNL040W RQC2Q12532 1038 aaKnown RBP12.03□□□□□ -0.48
YNL040WYNL040W YFR006WP43590 535 aa12.02□□□□□ -0.49
YNL040WYNL040W STS1P38637 319 aa12.01□□□□□ -0.49
YNL040WYNL040W RCR1P38212 213 aa12□□□□□ -0.49
YNL040WYNL040W FKH1P40466 484 aa12□□□□□ -0.49
YNL040WYNL040W ULI1P43604 169 aa12□□□□□ -0.49
YNL040WYNL040W MSB4Q12317 492 aa11.99□□□□□ -0.49
YNL040WYNL040W AIR2Q12476 344 aaKnown RBP11.99□□□□□ -0.49
YNL040WYNL040W IOC2Q12072 812 aa11.97□□□□□ -0.49
YNL040WYNL040W LDB19Q12502 818 aa11.97□□□□□ -0.49
YNL040WYNL040W YOL036WQ08206 761 aa11.94□□□□□ -0.5
YNL040WYNL040W VMA1P17255 1071 aaKnown RBP11.93□□□□□ -0.5
YNL040WYNL040W SET4P42948 560 aa11.92□□□□□ -0.5
YNL040WYNL040W EAP1P36041 632 aaKnown RBP11.91□□□□□ -0.5
YNL040WYNL040W SAM3Q08986 587 aa11.87□□□□□ -0.51
YNL040WYNL040W YJL171CP46992 396 aa11.86□□□□□ -0.51
YNL040WYNL040W DMA1P38823 416 aa11.85□□□□□ -0.51
YNL040WYNL040W TRP5P00931 707 aaKnown RBP11.82□□□□□ -0.52
YNL040WYNL040W RTG1P32607 177 aa11.75□□□□□ -0.53
YNL040WYNL040W BMT6Q12291 365 aa11.72□□□□□ -0.53
YNL040WYNL040W YNL035CP53962 389 aaKnown RBP11.7□□□□□ -0.54
YNL040WYNL040W GYP5Q12344 894 aa11.69□□□□□ -0.54
YNL040WYNL040W ABP1P15891 592 aaKnown RBP11.67□□□□□ -0.54
YNL040WYNL040W NCR1Q12200 1170 aa11.67□□□□□ -0.54
YNL040WYNL040W SEC61P32915 480 aa11.66□□□□□ -0.54
YNL040WYNL040W RAM2P29703 316 aa11.63□□□□□ -0.55
YNL040WYNL040W MAK11P20484 414 aaKnown RBP11.6□□□□□ -0.55
YNL040WYNL040W HTA1P04911 132 aaKnown RBP11.59□□□□□ -0.55
YNL040WYNL040W HTA2P04912 132 aa11.59□□□□□ -0.55
YNL040WYNL040W DCW1P36091 449 aa11.59□□□□□ -0.55
YNL040WYNL040W DAN4P47179 1161 aa11.57□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms