RNA–Protein interactions for RNA: YMR270C

RRN9, Transcript of Protein involved in promoting high level transcription of rDNA, yeastyeast

Gene RRN9, Length 1,098 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRN9YMR270C MTC1P47018 478 aaKnown RBP13.09□□□□□ -0.31
RRN9YMR270C DRS1P32892 752 aaKnown RBP11.93□□□□□ -0.5
RRN9YMR270C FAP1P53971 965 aa11.92□□□□□ -0.5
RRN9YMR270C PRY3P47033 881 aa11.24□□□□□ -0.61
RRN9YMR270C PRI1P10363 409 aa11.19□□□□□ -0.62
RRN9YMR270C AAD16Q02895 342 aa11.13□□□□□ -0.63
RRN9YMR270C ISW2Q08773 1120 aa10.86□□□□□ -0.67
RRN9YMR270C RPG1P38249 964 aaKnown RBP10.76□□□□□ -0.69
RRN9YMR270C YCK3P39962 524 aa10.76□□□□□ -0.69
RRN9YMR270C HAA1Q12753 694 aaKnown RBP10.61□□□□□ -0.71
RRN9YMR270C DIP2Q12220 943 aaPredicted RBP10.58□□□□□ -0.72
RRN9YMR270C TSR3Q12094 313 aaKnown RBP10.5□□□□□ -0.73
RRN9YMR270C RSE1Q04693 1361 aaKnown RBP10.29□□□□□ -0.76
RRN9YMR270C AVT3P36062 692 aa10.2□□□□□ -0.78
RRN9YMR270C MRPL32P25348 183 aa10.09□□□□□ -0.79
RRN9YMR270C RPL17AP05740 184 aaKnown RBP9.95□□□□□ -0.82
RRN9YMR270C RPL17BP46990 184 aaKnown RBP9.95□□□□□ -0.82
RRN9YMR270C REB1P21538 810 aa9.9□□□□□ -0.82
RRN9YMR270C YGL015CP33199 130 aa9.79□□□□□ -0.84
RRN9YMR270C BFR2Q06631 534 aaKnown RBP9.79□□□□□ -0.84
RRN9YMR270C SPT21P35209 758 aa9.6□□□□□ -0.87
RRN9YMR270C CDC27P38042 758 aa9.59□□□□□ -0.87
RRN9YMR270C YKR023WP36119 530 aaKnown RBP9.54□□□□□ -0.88
RRN9YMR270C UBP10P53874 792 aaPredicted RBP9.36□□□□□ -0.91
RRN9YMR270C TFC8Q12308 588 aa9.33□□□□□ -0.92
RRN9YMR270C MAP2P38174 421 aaKnown RBP9.3□□□□□ -0.92
RRN9YMR270C HOP09932 586 aa9.27□□□□□ -0.93
RRN9YMR270C DCD1P06773 312 aa9.22□□□□□ -0.93
RRN9YMR270C RIM101P33400 625 aa9.22□□□□□ -0.93
RRN9YMR270C BUD31P25337 157 aaPredicted RBP9.16□□□□□ -0.94
RRN9YMR270C SCY1P53009 804 aa9.05□□□□□ -0.96
RRN9YMR270C BCH2P36122 765 aa9.01□□□□□ -0.97
RRN9YMR270C TGL3P40308 642 aa8.97□□□□□ -0.97
RRN9YMR270C SLX5P32828 619 aaKnown RBP8.95□□□□□ -0.98
RRN9YMR270C TIF4632P39936 914 aaKnown RBP8.94□□□□□ -0.98
RRN9YMR270C INO80P53115 1489 aa8.94□□□□□ -0.98
RRN9YMR270C TFA1P36100 482 aa8.9□□□□□ -0.98
RRN9YMR270C OXP1P28273 1286 aa8.89□□□□□ -0.99
RRN9YMR270C MON2P48563 1636 aaPredicted RBP8.88□□□□□ -0.99
RRN9YMR270C EPS1P40557 701 aa8.75□□□□□ -1.01
RRN9YMR270C BDF1P35817 686 aa8.73□□□□□ -1.01
RRN9YMR270C UBP9P39967 754 aa8.7□□□□□ -1.02
RRN9YMR270C YIL055CP40523 627 aaKnown RBP8.67□□□□□ -1.02
RRN9YMR270C PTP3P40048 928 aa8.66□□□□□ -1.02
RRN9YMR270C MST1P07236 462 aa8.62□□□□□ -1.03
RRN9YMR270C RSM7P47150 247 aa8.61□□□□□ -1.03
RRN9YMR270C SIS1P25294 352 aaKnown RBP8.6□□□□□ -1.03
RRN9YMR270C NSR1P27476 414 aaKnown RBP RIP-Chip data8.55□□□□□ -1.04not detected
RRN9YMR270C AI2P03876 854 aa8.53□□□□□ -1.04
RRN9YMR270C BBC1P47068 1157 aa8.53□□□□□ -1.04
RRN9YMR270C TCB3Q03640 1545 aaKnown RBP8.52□□□□□ -1.05
RRN9YMR270C YOR238WQ08634 303 aa8.48□□□□□ -1.05
RRN9YMR270C YAH1Q12184 172 aaKnown RBP8.48□□□□□ -1.05
RRN9YMR270C SWR1Q05471 1514 aa8.47□□□□□ -1.05
RRN9YMR270C DNA2P38859 1522 aa8.46□□□□□ -1.05
RRN9YMR270C YLR271WQ06152 274 aa8.43□□□□□ -1.06
RRN9YMR270C SGS1P35187 1447 aa8.4□□□□□ -1.06
RRN9YMR270C YAP5P40574 245 aa8.4□□□□□ -1.06
RRN9YMR270C YBL029C-AQ3E756 94 aa8.39□□□□□ -1.07
RRN9YMR270C KOG1P38873 1557 aa8.39□□□□□ -1.07
RRN9YMR270C TY1B-DR4Q07793 1604 aa8.36□□□□□ -1.07
RRN9YMR270C PSD2P53037 1138 aaKnown RBP8.36□□□□□ -1.07
RRN9YMR270C VNX1P42839 908 aa8.34□□□□□ -1.07
RRN9YMR270C RQC2Q12532 1038 aaKnown RBP8.26□□□□□ -1.09
RRN9YMR270C SSP1P38871 571 aa8.24□□□□□ -1.09
RRN9YMR270C SPP1Q03012 353 aa8.23□□□□□ -1.09
RRN9YMR270C WSC3Q12215 556 aa8.2□□□□□ -1.1
RRN9YMR270C MRM1P25270 412 aa8.19□□□□□ -1.1
RRN9YMR270C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
RRN9YMR270C TIF11P38912 153 aaKnown RBP8.17□□□□□ -1.1
RRN9YMR270C GTT3P39996 337 aa8.15□□□□□ -1.1
RRN9YMR270C SPT6P23615 1451 aaKnown RBP8.14□□□□□ -1.11
RRN9YMR270C AIR2Q12476 344 aaKnown RBP8.12□□□□□ -1.11
RRN9YMR270C HSL1P34244 1518 aa8.12□□□□□ -1.11
RRN9YMR270C FKH1P40466 484 aa8.11□□□□□ -1.11
RRN9YMR270C SPA2P23201 1466 aaKnown RBP8.11□□□□□ -1.11
RRN9YMR270C VPS29P38759 282 aa8.09□□□□□ -1.11
RRN9YMR270C MGA2P40578 1113 aa8.09□□□□□ -1.11
RRN9YMR270C CST9Q06032 482 aa8.09□□□□□ -1.11
RRN9YMR270C PIB1Q06651 286 aa8.09□□□□□ -1.11
RRN9YMR270C IOC2Q12072 812 aa8.08□□□□□ -1.12
RRN9YMR270C YMR1P47147 688 aaKnown RBP RIP-Chip data8.05□□□□□ -1.12not detected
RRN9YMR270C MSB4Q12317 492 aa8.05□□□□□ -1.12
RRN9YMR270C ULI1P43604 169 aa8.04□□□□□ -1.12
RRN9YMR270C RTG3P38165 486 aa8.02□□□□□ -1.13
RRN9YMR270C LDB19Q12502 818 aa8.02□□□□□ -1.13
RRN9YMR270C DBP1P24784 617 aaKnown RBP8□□□□□ -1.13
RRN9YMR270C ECM5Q03214 1411 aa7.98□□□□□ -1.13
RRN9YMR270C EAP1P36041 632 aaKnown RBP7.98□□□□□ -1.13
RRN9YMR270C STS1P38637 319 aa7.98□□□□□ -1.13
RRN9YMR270C YJL171CP46992 396 aa7.97□□□□□ -1.13
RRN9YMR270C YOL036WQ08206 761 aa7.97□□□□□ -1.13
RRN9YMR270C SAM3Q08986 587 aa7.96□□□□□ -1.14
RRN9YMR270C VMA1P17255 1071 aaKnown RBP7.95□□□□□ -1.14
RRN9YMR270C BUD4P47136 1447 aa7.95□□□□□ -1.14
RRN9YMR270C HIR3P47171 1648 aa7.94□□□□□ -1.14
RRN9YMR270C YFR006WP43590 535 aa7.94□□□□□ -1.14
RRN9YMR270C RCR1P38212 213 aa7.93□□□□□ -1.14
RRN9YMR270C SET4P42948 560 aa7.93□□□□□ -1.14
RRN9YMR270C TRP5P00931 707 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms