RNA–Protein interactions for RNA: YMR269W

TMA23, Transcript of Nucleolar protein implicated in ribosome biogenesis, yeastyeast

Gene TMA23, Length 636 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TMA23YMR269W SGS1P35187 1447 aa16.48■□□□□ 0.23
TMA23YMR269W MON2P48563 1636 aaPredicted RBP16.28■□□□□ 0.2
TMA23YMR269W INO80P53115 1489 aa16.26■□□□□ 0.19
TMA23YMR269W TCB3Q03640 1545 aaKnown RBP16.17■□□□□ 0.18
TMA23YMR269W TY1B-DR4Q07793 1604 aa16.01■□□□□ 0.15
TMA23YMR269W SWR1Q05471 1514 aa15.84■□□□□ 0.13
TMA23YMR269W HSL1P34244 1518 aa15.65■□□□□ 0.1
TMA23YMR269W SPT6P23615 1451 aaKnown RBP15.62■□□□□ 0.09
TMA23YMR269W SSN2P38931 1420 aa15.56■□□□□ 0.08
TMA23YMR269W DNA2P38859 1522 aa15.53■□□□□ 0.08
TMA23YMR269W SPA2P23201 1466 aaKnown RBP15.5■□□□□ 0.07
TMA23YMR269W KOG1P38873 1557 aa15.38■□□□□ 0.05
TMA23YMR269W HIR3P47171 1648 aa15.35■□□□□ 0.05
TMA23YMR269W XRN1P22147 1528 aaKnown RBP15.2■□□□□ 0.02
TMA23YMR269W DRS1P32892 752 aaKnown RBP15.08■□□□□ 0
TMA23YMR269W ECM5Q03214 1411 aa14.97□□□□□ -0.01
TMA23YMR269W REV3P14284 1504 aa14.96□□□□□ -0.02
TMA23YMR269W BUD4P47136 1447 aa14.94□□□□□ -0.02
TMA23YMR269W THO2P53552 1597 aaKnown RBP14.94□□□□□ -0.02
TMA23YMR269W SIN3P22579 1536 aa14.82□□□□□ -0.04
TMA23YMR269W TAF2P23255 1407 aa14.81□□□□□ -0.04
TMA23YMR269W SSK2P53599 1579 aa14.72□□□□□ -0.05
TMA23YMR269W ATG2P53855 1592 aa14.72□□□□□ -0.05
TMA23YMR269W MDS3P53094 1487 aa14.71□□□□□ -0.05
TMA23YMR269W PEP1P32319 1579 aa14.67□□□□□ -0.06
TMA23YMR269W SKI3P17883 1432 aaKnown RBP14.62□□□□□ -0.07
TMA23YMR269W ESP1Q03018 1630 aa14.6□□□□□ -0.07
TMA23YMR269W RSE1Q04693 1361 aaKnown RBP14.53□□□□□ -0.08
TMA23YMR269W MYO2P19524 1574 aaKnown RBP14.48□□□□□ -0.09
TMA23YMR269W YPK9Q12697 1472 aa14.42□□□□□ -0.1
TMA23YMR269W SCC2Q04002 1493 aa14.34□□□□□ -0.11
TMA23YMR269W UFD4P33202 1483 aa14.29□□□□□ -0.12
TMA23YMR269W BPT1P14772 1559 aa14.27□□□□□ -0.12
TMA23YMR269W RPO31P04051 1460 aa14.25□□□□□ -0.13
TMA23YMR269W POL1P13382 1468 aa14.23□□□□□ -0.13
TMA23YMR269W STU1P38198 1513 aa14.16□□□□□ -0.14
TMA23YMR269W MTC1P47018 478 aaKnown RBP14.16□□□□□ -0.14
TMA23YMR269W RKR1Q04781 1562 aa14.14□□□□□ -0.15
TMA23YMR269W YCF1P39109 1515 aaKnown RBP14.14□□□□□ -0.15
TMA23YMR269W TOP2P06786 1428 aaKnown RBP14.11□□□□□ -0.15
TMA23YMR269W TY2B-LR1P0C2J3 1770 aa14.09□□□□□ -0.15
TMA23YMR269W TY2B-FP0CX63 1770 aa14.09□□□□□ -0.15
TMA23YMR269W TY2B-GR2P0CX64 1770 aa14.09□□□□□ -0.15
TMA23YMR269W TY2B-CP25384 1770 aa14.09□□□□□ -0.15
TMA23YMR269W TY2B-DR2Q03494 1770 aa14.09□□□□□ -0.15
TMA23YMR269W TY1B-DR1Q03855 1755 aa14.09□□□□□ -0.15
TMA23YMR269W TY2B-DR3Q07791 1770 aaKnown RBP14.09□□□□□ -0.15
TMA23YMR269W TY2B-OR1Q12113 1770 aa14.09□□□□□ -0.15
TMA23YMR269W TY2B-DR1Q12472 1770 aa14.09□□□□□ -0.15
TMA23YMR269W TY2B-OR2Q12501 1770 aa14.09□□□□□ -0.15
TMA23YMR269W YOR1P53049 1477 aa14.06□□□□□ -0.16
TMA23YMR269W SMC4Q12267 1418 aa13.98□□□□□ -0.17
TMA23YMR269W TY1B-DR3Q99231 1755 aa13.97□□□□□ -0.17
TMA23YMR269W RQC2Q12532 1038 aaKnown RBP13.96□□□□□ -0.17
TMA23YMR269W CHD1P32657 1468 aa13.95□□□□□ -0.18
TMA23YMR269W CDC25P04821 1589 aa13.94□□□□□ -0.18
TMA23YMR269W YTA7P40340 1379 aa13.94□□□□□ -0.18
TMA23YMR269W TY2B-BQ12491 1770 aa13.94□□□□□ -0.18
TMA23YMR269W TY1B-BRQ12193 1756 aa13.93□□□□□ -0.18
TMA23YMR269W TY1B-GR3Q12316 1755 aa13.93□□□□□ -0.18
TMA23YMR269W TY1B-ORQ92393 1755 aa13.93□□□□□ -0.18
TMA23YMR269W MMS22Q06164 1454 aa13.87□□□□□ -0.19
TMA23YMR269W TY1B-HO13535 1793 aa13.87□□□□□ -0.19
TMA23YMR269W TY1B-DR5P0C2I2 1755 aa13.87□□□□□ -0.19
TMA23YMR269W TY1B-DR6P0C2I3 1755 aa13.87□□□□□ -0.19
TMA23YMR269W TY1B-LR2P0C2I5 1755 aa13.87□□□□□ -0.19
TMA23YMR269W TY1B-LR3P0C2I6 1755 aaKnown RBP13.87□□□□□ -0.19
TMA23YMR269W TY1B-PR1P0C2I9 1755 aaKnown RBP13.87□□□□□ -0.19
TMA23YMR269W TY1B-PR2P0C2J0 1756 aa13.87□□□□□ -0.19
TMA23YMR269W TY1B-PR3P0C2J1 1755 aaKnown RBP13.87□□□□□ -0.19
TMA23YMR269W TY1B-JR1P47098 1755 aa13.87□□□□□ -0.19
TMA23YMR269W TY1B-ML2Q03434 1755 aaKnown RBP13.87□□□□□ -0.19
TMA23YMR269W TY1B-ER1Q03612 1755 aa13.87□□□□□ -0.19
TMA23YMR269W TY1B-ML1Q04711 1755 aaKnown RBP13.87□□□□□ -0.19
TMA23YMR269W TY1B-GR2Q12269 1755 aa13.87□□□□□ -0.19
TMA23YMR269W TY1B-OLQ12273 1755 aa13.87□□□□□ -0.19
TMA23YMR269W TY1B-PLQ12414 1755 aaKnown RBP13.87□□□□□ -0.19
TMA23YMR269W PAN1P32521 1480 aa13.86□□□□□ -0.19
TMA23YMR269W MYO4P32492 1471 aa13.84□□□□□ -0.19
TMA23YMR269W SPP41P38904 1435 aa13.81□□□□□ -0.2
TMA23YMR269W DNF1P32660 1571 aa13.79□□□□□ -0.2
TMA23YMR269W ESC1Q03661 1658 aaKnown RBP13.78□□□□□ -0.2
TMA23YMR269W SAS10Q12136 610 aaPredicted RBP13.72□□□□□ -0.21
TMA23YMR269W TSC11P40061 1430 aa13.71□□□□□ -0.22
TMA23YMR269W VTH1P40438 1549 aa13.69□□□□□ -0.22
TMA23YMR269W VTH2P40890 1549 aa13.69□□□□□ -0.22
TMA23YMR269W RPA190P10964 1664 aaKnown RBP13.69□□□□□ -0.22
TMA23YMR269W TRM732Q03496 1420 aa13.68□□□□□ -0.22
TMA23YMR269W SNQ2P32568 1501 aaKnown RBP13.66□□□□□ -0.22
TMA23YMR269W TY1B-JR2P47100 1755 aaKnown RBP13.63□□□□□ -0.23
TMA23YMR269W TY1B-ER2Q03619 1755 aa13.63□□□□□ -0.23
TMA23YMR269W TY1B-MR1Q04214 1755 aa13.63□□□□□ -0.23
TMA23YMR269W TY1B-MR2Q04670 1755 aaKnown RBP13.63□□□□□ -0.23
TMA23YMR269W TY1B-LR1Q12088 1755 aaKnown RBP13.63□□□□□ -0.23
TMA23YMR269W TY1B-NL1Q12112 1755 aa13.63□□□□□ -0.23
TMA23YMR269W TY1B-GR1Q12141 1755 aa13.63□□□□□ -0.23
TMA23YMR269W TY1B-BLQ12490 1755 aa13.63□□□□□ -0.23
TMA23YMR269W STH1P32597 1359 aa13.62□□□□□ -0.23
TMA23YMR269W MET5P47169 1442 aa13.57□□□□□ -0.24
TMA23YMR269W SNT2P53127 1403 aa13.54□□□□□ -0.24
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms