RNA–Protein interactions for RNA: YMR235C

RNA1, Transcript of GTPase activating protein (GAP) for Gsp1p, yeastyeast

Gene RNA1, Length 1,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RNA1YMR235C MTC1P47018 478 aaKnown RBP13.97□□□□□ -0.17
RNA1YMR235C DRS1P32892 752 aaKnown RBP13.12□□□□□ -0.31
RNA1YMR235C FAP1P53971 965 aa12.48□□□□□ -0.41
RNA1YMR235C PRI1P10363 409 aa11.72□□□□□ -0.53
RNA1YMR235C PRY3P47033 881 aa11.7□□□□□ -0.54
RNA1YMR235C AAD16Q02895 342 aa11.65□□□□□ -0.54
RNA1YMR235C ISW2Q08773 1120 aa11.58□□□□□ -0.56
RNA1YMR235C DIP2Q12220 943 aaPredicted RBP11.47□□□□□ -0.57
RNA1YMR235C RPG1P38249 964 aaKnown RBP11.42□□□□□ -0.58
RNA1YMR235C RSE1Q04693 1361 aaKnown RBP11.08□□□□□ -0.64
RNA1YMR235C AVT3P36062 692 aa11.07□□□□□ -0.64
RNA1YMR235C TSR3Q12094 313 aaKnown RBP11.07□□□□□ -0.64
RNA1YMR235C HAA1Q12753 694 aaKnown RBP11.03□□□□□ -0.64
RNA1YMR235C YCK3P39962 524 aa11.01□□□□□ -0.65
RNA1YMR235C BFR2Q06631 534 aaKnown RBP10.95□□□□□ -0.66
RNA1YMR235C RPL17AP05740 184 aaKnown RBP10.71□□□□□ -0.69
RNA1YMR235C RPL17BP46990 184 aaKnown RBP10.71□□□□□ -0.69
RNA1YMR235C REB1P21538 810 aa10.68□□□□□ -0.7
RNA1YMR235C MRPL32P25348 183 aa10.68□□□□□ -0.7
RNA1YMR235C SPT21P35209 758 aa10.24□□□□□ -0.77
RNA1YMR235C YGL015CP33199 130 aa10.22□□□□□ -0.77
RNA1YMR235C YKR023WP36119 530 aaKnown RBP10.11□□□□□ -0.79
RNA1YMR235C CDC27P38042 758 aa10.1□□□□□ -0.79
RNA1YMR235C RIM101P33400 625 aa9.93□□□□□ -0.82
RNA1YMR235C TFC8Q12308 588 aa9.92□□□□□ -0.82
RNA1YMR235C HOP09932 586 aa9.9□□□□□ -0.82
RNA1YMR235C UBP10P53874 792 aaPredicted RBP9.87□□□□□ -0.83
RNA1YMR235C DCD1P06773 312 aa9.83□□□□□ -0.84
RNA1YMR235C MAP2P38174 421 aaKnown RBP9.8□□□□□ -0.84
RNA1YMR235C TFA1P36100 482 aa9.69□□□□□ -0.86
RNA1YMR235C SCY1P53009 804 aa9.62□□□□□ -0.87
RNA1YMR235C BCH2P36122 765 aa9.59□□□□□ -0.87
RNA1YMR235C OXP1P28273 1286 aa9.56□□□□□ -0.88
RNA1YMR235C SLX5P32828 619 aaKnown RBP9.52□□□□□ -0.89
RNA1YMR235C TIF4632P39936 914 aaKnown RBP9.48□□□□□ -0.89
RNA1YMR235C YIL055CP40523 627 aaKnown RBP9.47□□□□□ -0.89
RNA1YMR235C PTP3P40048 928 aa9.45□□□□□ -0.9
RNA1YMR235C TGL3P40308 642 aa9.42□□□□□ -0.9
RNA1YMR235C EPS1P40557 701 aa9.36□□□□□ -0.91
RNA1YMR235C BDF1P35817 686 aa9.32□□□□□ -0.92
RNA1YMR235C RSM7P47150 247 aa9.32□□□□□ -0.92
RNA1YMR235C BUD31P25337 157 aaPredicted RBP9.31□□□□□ -0.92
RNA1YMR235C YAH1Q12184 172 aaKnown RBP9.31□□□□□ -0.92
RNA1YMR235C BBC1P47068 1157 aa9.25□□□□□ -0.93
RNA1YMR235C AI2P03876 854 aa9.22□□□□□ -0.93
RNA1YMR235C YLR271WQ06152 274 aa9.16□□□□□ -0.94
RNA1YMR235C UBP9P39967 754 aa9.13□□□□□ -0.95
RNA1YMR235C SSP1P38871 571 aa9.09□□□□□ -0.95
RNA1YMR235C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.05□□□□□ -0.96not detected
RNA1YMR235C NSR1P27476 414 aaKnown RBP RIP-Chip data9.04□□□□□ -0.96not detected
RNA1YMR235C MST1P07236 462 aa9.03□□□□□ -0.96
RNA1YMR235C PSD2P53037 1138 aaKnown RBP9.02□□□□□ -0.97
RNA1YMR235C YOR238WQ08634 303 aa9.02□□□□□ -0.97
RNA1YMR235C YAP5P40574 245 aa8.97□□□□□ -0.97
RNA1YMR235C MRM1P25270 412 aa8.89□□□□□ -0.99
RNA1YMR235C SIS1P25294 352 aaKnown RBP8.88□□□□□ -0.99
RNA1YMR235C MGA2P40578 1113 aa8.87□□□□□ -0.99
RNA1YMR235C YBL029C-AQ3E756 94 aa8.84□□□□□ -0.99
RNA1YMR235C CST9Q06032 482 aa8.83□□□□□ -1
RNA1YMR235C GTT3P39996 337 aa8.77□□□□□ -1.01
RNA1YMR235C VNX1P42839 908 aa8.77□□□□□ -1.01
RNA1YMR235C RTG3P38165 486 aa8.73□□□□□ -1.01
RNA1YMR235C WSC3Q12215 556 aa8.73□□□□□ -1.01
RNA1YMR235C PIB1Q06651 286 aa8.71□□□□□ -1.02
RNA1YMR235C SPP1Q03012 353 aa8.7□□□□□ -1.02
RNA1YMR235C YMR1P47147 688 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02 RIP-Chip
RNA1YMR235C VPS29P38759 282 aa8.68□□□□□ -1.02
RNA1YMR235C DBP1P24784 617 aaKnown RBP8.64□□□□□ -1.03
RNA1YMR235C TIF11P38912 153 aaKnown RBP8.64□□□□□ -1.03
RNA1YMR235C RCR1P38212 213 aa8.59□□□□□ -1.03
RNA1YMR235C YFR006WP43590 535 aa8.59□□□□□ -1.03
RNA1YMR235C STS1P38637 319 aa8.58□□□□□ -1.04
RNA1YMR235C MSB4Q12317 492 aa8.58□□□□□ -1.04
RNA1YMR235C VMA1P17255 1071 aaKnown RBP8.54□□□□□ -1.04
RNA1YMR235C ULI1P43604 169 aa8.54□□□□□ -1.04
RNA1YMR235C EAP1P36041 632 aaKnown RBP8.52□□□□□ -1.05
RNA1YMR235C YOL036WQ08206 761 aa8.52□□□□□ -1.05
RNA1YMR235C SET4P42948 560 aa8.5□□□□□ -1.05
RNA1YMR235C SAM3Q08986 587 aa8.5□□□□□ -1.05
RNA1YMR235C IOC2Q12072 812 aa8.5□□□□□ -1.05
RNA1YMR235C LDB19Q12502 818 aa8.5□□□□□ -1.05
RNA1YMR235C RQC2Q12532 1038 aaKnown RBP8.5□□□□□ -1.05
RNA1YMR235C FKH1P40466 484 aa8.49□□□□□ -1.05
RNA1YMR235C AIR2Q12476 344 aaKnown RBP8.47□□□□□ -1.05
RNA1YMR235C TRP5P00931 707 aaKnown RBP8.42□□□□□ -1.06
RNA1YMR235C YJL171CP46992 396 aa8.42□□□□□ -1.06
RNA1YMR235C ABP1P15891 592 aaKnown RBP8.39□□□□□ -1.07
RNA1YMR235C MAK11P20484 414 aaKnown RBP8.39□□□□□ -1.07
RNA1YMR235C RAM2P29703 316 aa8.39□□□□□ -1.07
RNA1YMR235C GYP5Q12344 894 aa8.38□□□□□ -1.07
RNA1YMR235C RTG1P32607 177 aa8.37□□□□□ -1.07
RNA1YMR235C YNL035CP53962 389 aaKnown RBP8.35□□□□□ -1.07
RNA1YMR235C SEC61P32915 480 aa8.33□□□□□ -1.08
RNA1YMR235C HTA1P04911 132 aaKnown RBP8.32□□□□□ -1.08
RNA1YMR235C HTA2P04912 132 aa8.32□□□□□ -1.08
RNA1YMR235C MIF2P35201 549 aa8.32□□□□□ -1.08
RNA1YMR235C NCR1Q12200 1170 aa8.32□□□□□ -1.08
RNA1YMR235C BMT6Q12291 365 aa8.32□□□□□ -1.08
RNA1YMR235C DCW1P36091 449 aa8.3□□□□□ -1.08
RNA1YMR235C JIP4Q03361 876 aa8.3□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms