RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C MTC1P47018 478 aaKnown RBP11.33□□□□□ -0.6
VTI1YMR197C DRS1P32892 752 aaKnown RBP10.55□□□□□ -0.72
VTI1YMR197C FAP1P53971 965 aa10.45□□□□□ -0.74
VTI1YMR197C PRY3P47033 881 aa9.87□□□□□ -0.83
VTI1YMR197C PRI1P10363 409 aa9.58□□□□□ -0.88
VTI1YMR197C AAD16Q02895 342 aa9.53□□□□□ -0.88
VTI1YMR197C ISW2Q08773 1120 aa9.41□□□□□ -0.9
VTI1YMR197C RPG1P38249 964 aaKnown RBP9.31□□□□□ -0.92
VTI1YMR197C DIP2Q12220 943 aaPredicted RBP9.25□□□□□ -0.93
VTI1YMR197C HAA1Q12753 694 aaKnown RBP9.17□□□□□ -0.94
VTI1YMR197C YCK3P39962 524 aa9.12□□□□□ -0.95
VTI1YMR197C TSR3Q12094 313 aaKnown RBP9.06□□□□□ -0.96
VTI1YMR197C RSE1Q04693 1361 aaKnown RBP8.96□□□□□ -0.98
VTI1YMR197C AVT3P36062 692 aa8.9□□□□□ -0.98
VTI1YMR197C BFR2Q06631 534 aaKnown RBP8.75□□□□□ -1.01
VTI1YMR197C MRPL32P25348 183 aa8.7□□□□□ -1.02
VTI1YMR197C RPL17AP05740 184 aaKnown RBP8.68□□□□□ -1.02
VTI1YMR197C RPL17BP46990 184 aaKnown RBP8.68□□□□□ -1.02
VTI1YMR197C REB1P21538 810 aa8.67□□□□□ -1.02
VTI1YMR197C YGL015CP33199 130 aa8.34□□□□□ -1.07
VTI1YMR197C SPT21P35209 758 aa8.3□□□□□ -1.08
VTI1YMR197C CDC27P38042 758 aa8.26□□□□□ -1.09
VTI1YMR197C YKR023WP36119 530 aaKnown RBP8.22□□□□□ -1.09
VTI1YMR197C BUD31P25337 157 aaPredicted RBP8.21□□□□□ -1.1
VTI1YMR197C HOP09932 586 aa8.06□□□□□ -1.12
VTI1YMR197C TFC8Q12308 588 aa8.05□□□□□ -1.12
VTI1YMR197C DCD1P06773 312 aa8.04□□□□□ -1.12
VTI1YMR197C UBP10P53874 792 aaPredicted RBP8.03□□□□□ -1.12
VTI1YMR197C MAP2P38174 421 aaKnown RBP8.01□□□□□ -1.13
VTI1YMR197C RIM101P33400 625 aa7.99□□□□□ -1.13
VTI1YMR197C SCY1P53009 804 aa7.85□□□□□ -1.15
VTI1YMR197C BCH2P36122 765 aa7.79□□□□□ -1.16
VTI1YMR197C SLX5P32828 619 aaKnown RBP7.74□□□□□ -1.17
VTI1YMR197C OXP1P28273 1286 aa7.72□□□□□ -1.17
VTI1YMR197C SIS1P25294 352 aaKnown RBP7.7□□□□□ -1.18
VTI1YMR197C TIF4632P39936 914 aaKnown RBP7.7□□□□□ -1.18
VTI1YMR197C TGL3P40308 642 aa7.65□□□□□ -1.18
VTI1YMR197C PTP3P40048 928 aa7.64□□□□□ -1.19
VTI1YMR197C YIL055CP40523 627 aaKnown RBP7.63□□□□□ -1.19
VTI1YMR197C TFA1P36100 482 aa7.62□□□□□ -1.19
VTI1YMR197C EPS1P40557 701 aa7.6□□□□□ -1.19
VTI1YMR197C BDF1P35817 686 aa7.57□□□□□ -1.2
VTI1YMR197C YAH1Q12184 172 aaKnown RBP7.52□□□□□ -1.21
VTI1YMR197C RSM7P47150 247 aa7.49□□□□□ -1.21
VTI1YMR197C BBC1P47068 1157 aa7.46□□□□□ -1.22
VTI1YMR197C AI2P03876 854 aa7.44□□□□□ -1.22
VTI1YMR197C UBP9P39967 754 aa7.44□□□□□ -1.22
VTI1YMR197C YLR271WQ06152 274 aa7.37□□□□□ -1.23
VTI1YMR197C MST1P07236 462 aa7.32□□□□□ -1.24
VTI1YMR197C YOR238WQ08634 303 aa7.32□□□□□ -1.24
VTI1YMR197C NSR1P27476 414 aaKnown RBP RIP-Chip data7.3□□□□□ -1.24not detected
VTI1YMR197C PSD2P53037 1138 aaKnown RBP7.27□□□□□ -1.25
VTI1YMR197C SSP1P38871 571 aa7.26□□□□□ -1.25
VTI1YMR197C YAP5P40574 245 aa7.26□□□□□ -1.25
VTI1YMR197C YBL029C-AQ3E756 94 aa7.25□□□□□ -1.25
VTI1YMR197C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.24□□□□□ -1.25not detected
VTI1YMR197C MRM1P25270 412 aa7.18□□□□□ -1.26
VTI1YMR197C VNX1P42839 908 aa7.14□□□□□ -1.27
VTI1YMR197C WSC3Q12215 556 aa7.13□□□□□ -1.27
VTI1YMR197C GTT3P39996 337 aa7.12□□□□□ -1.27
VTI1YMR197C CST9Q06032 482 aa7.12□□□□□ -1.27
VTI1YMR197C PIB1Q06651 286 aa7.11□□□□□ -1.27
VTI1YMR197C SPP1Q03012 353 aa7.1□□□□□ -1.27
VTI1YMR197C MGA2P40578 1113 aa7.09□□□□□ -1.27
VTI1YMR197C TIF11P38912 153 aaKnown RBP7.02□□□□□ -1.29
VTI1YMR197C RTG3P38165 486 aa7.01□□□□□ -1.29
VTI1YMR197C VPS29P38759 282 aa7□□□□□ -1.29
VTI1YMR197C YMR1P47147 688 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
VTI1YMR197C DBP1P24784 617 aaKnown RBP6.98□□□□□ -1.29
VTI1YMR197C RCR1P38212 213 aa6.96□□□□□ -1.3
VTI1YMR197C YFR006WP43590 535 aa6.96□□□□□ -1.3
VTI1YMR197C STS1P38637 319 aa6.95□□□□□ -1.3
VTI1YMR197C ULI1P43604 169 aa6.94□□□□□ -1.3
VTI1YMR197C FKH1P40466 484 aa6.93□□□□□ -1.3
VTI1YMR197C MSB4Q12317 492 aa6.92□□□□□ -1.3
VTI1YMR197C LDB19Q12502 818 aa6.92□□□□□ -1.3
VTI1YMR197C SET4P42948 560 aa6.91□□□□□ -1.3
VTI1YMR197C YOL036WQ08206 761 aa6.91□□□□□ -1.3
VTI1YMR197C AIR2Q12476 344 aaKnown RBP6.91□□□□□ -1.3
VTI1YMR197C VMA1P17255 1071 aaKnown RBP6.9□□□□□ -1.3
VTI1YMR197C IOC2Q12072 812 aa6.9□□□□□ -1.3
VTI1YMR197C EAP1P36041 632 aaKnown RBP6.88□□□□□ -1.31
VTI1YMR197C YJL171CP46992 396 aa6.87□□□□□ -1.31
VTI1YMR197C SAM3Q08986 587 aa6.84□□□□□ -1.31
VTI1YMR197C TRP5P00931 707 aaKnown RBP6.83□□□□□ -1.32
VTI1YMR197C RTG1P32607 177 aa6.8□□□□□ -1.32
VTI1YMR197C BMT6Q12291 365 aa6.78□□□□□ -1.32
VTI1YMR197C GYP5Q12344 894 aa6.77□□□□□ -1.33
VTI1YMR197C YNL035CP53962 389 aaKnown RBP6.76□□□□□ -1.33
VTI1YMR197C ABP1P15891 592 aaKnown RBP6.74□□□□□ -1.33
VTI1YMR197C NCR1Q12200 1170 aa6.74□□□□□ -1.33
VTI1YMR197C RAM2P29703 316 aa6.73□□□□□ -1.33
VTI1YMR197C SEC61P32915 480 aa6.73□□□□□ -1.33
VTI1YMR197C DCW1P36091 449 aa6.72□□□□□ -1.33
VTI1YMR197C HTA1P04911 132 aaKnown RBP6.71□□□□□ -1.34
VTI1YMR197C HTA2P04912 132 aa6.71□□□□□ -1.34
VTI1YMR197C MAK11P20484 414 aaKnown RBP6.71□□□□□ -1.34
VTI1YMR197C MIF2P35201 549 aa6.7□□□□□ -1.34
VTI1YMR197C JIP4Q03361 876 aa6.69□□□□□ -1.34
VTI1YMR197C DAN4P47179 1161 aa6.68□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms