RNA–Protein interactions for RNA: YMR135C

GID8, Transcript of Subunit of GID Complex, binds strongly to central component Vid30p, yeastyeast

Gene GID8, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GID8YMR135C SGS1P35187 1447 aa15.11■□□□□ 0.01
GID8YMR135C MTC1P47018 478 aaKnown RBP14.97□□□□□ -0.01
GID8YMR135C FAP1P53971 965 aa14.82□□□□□ -0.04
GID8YMR135C SPA2P23201 1466 aaKnown RBP14.78□□□□□ -0.04
GID8YMR135C INO80P53115 1489 aa14.72□□□□□ -0.05
GID8YMR135C SSN2P38931 1420 aa14.64□□□□□ -0.07
GID8YMR135C TCB3Q03640 1545 aaKnown RBP14.36□□□□□ -0.11
GID8YMR135C TY1B-DR4Q07793 1604 aa14.17□□□□□ -0.14
GID8YMR135C DRS1P32892 752 aaKnown RBP14.12□□□□□ -0.15
GID8YMR135C PRY3P47033 881 aa14□□□□□ -0.17
GID8YMR135C HSL1P34244 1518 aa13.98□□□□□ -0.17
GID8YMR135C SPT6P23615 1451 aaKnown RBP13.9□□□□□ -0.18
GID8YMR135C HIR3P47171 1648 aa13.74□□□□□ -0.21
GID8YMR135C MON2P48563 1636 aaPredicted RBP13.73□□□□□ -0.21
GID8YMR135C XRN1P22147 1528 aaKnown RBP13.69□□□□□ -0.22
GID8YMR135C SWR1Q05471 1514 aa13.65□□□□□ -0.22
GID8YMR135C REV3P14284 1504 aa13.55□□□□□ -0.24
GID8YMR135C SIN3P22579 1536 aa13.52□□□□□ -0.25
GID8YMR135C SKI3P17883 1432 aaKnown RBP13.51□□□□□ -0.25
GID8YMR135C THO2P53552 1597 aaKnown RBP13.47□□□□□ -0.25
GID8YMR135C SSK2P53599 1579 aa13.44□□□□□ -0.26
GID8YMR135C CHD1P32657 1468 aa13.39□□□□□ -0.27
GID8YMR135C MMS22Q06164 1454 aa13.31□□□□□ -0.28
GID8YMR135C TAF2P23255 1407 aa13.3□□□□□ -0.28
GID8YMR135C AAD16Q02895 342 aa13.28□□□□□ -0.28
GID8YMR135C ESP1Q03018 1630 aa13.27□□□□□ -0.29
GID8YMR135C MYO2P19524 1574 aaKnown RBP13.24□□□□□ -0.29
GID8YMR135C YCK3P39962 524 aa13.23□□□□□ -0.29
GID8YMR135C PRI1P10363 409 aa13.19□□□□□ -0.3
GID8YMR135C POL1P13382 1468 aa13.17□□□□□ -0.3
GID8YMR135C STU1P38198 1513 aa13.13□□□□□ -0.31
GID8YMR135C BUD4P47136 1447 aa13.09□□□□□ -0.31
GID8YMR135C ATG2P53855 1592 aa13.09□□□□□ -0.31
GID8YMR135C YPK9Q12697 1472 aa13.08□□□□□ -0.32
GID8YMR135C DNA2P38859 1522 aa13.06□□□□□ -0.32
GID8YMR135C YTA7P40340 1379 aa13.05□□□□□ -0.32
GID8YMR135C KOG1P38873 1557 aa13.05□□□□□ -0.32
GID8YMR135C ECM5Q03214 1411 aa12.99□□□□□ -0.33
GID8YMR135C BPT1P14772 1559 aa12.98□□□□□ -0.33
GID8YMR135C HAA1Q12753 694 aaKnown RBP12.97□□□□□ -0.33
GID8YMR135C YOR1P53049 1477 aa12.93□□□□□ -0.34
GID8YMR135C PEP1P32319 1579 aa12.93□□□□□ -0.34
GID8YMR135C SCC2Q04002 1493 aa12.92□□□□□ -0.34
GID8YMR135C RKR1Q04781 1562 aa12.92□□□□□ -0.34
GID8YMR135C MYO4P32492 1471 aa12.89□□□□□ -0.35
GID8YMR135C UFD4P33202 1483 aa12.89□□□□□ -0.35
GID8YMR135C RPO31P04051 1460 aa12.87□□□□□ -0.35
GID8YMR135C TRM732Q03496 1420 aa12.84□□□□□ -0.35
GID8YMR135C SAS10Q12136 610 aaPredicted RBP12.84□□□□□ -0.35
GID8YMR135C MDS3P53094 1487 aa12.83□□□□□ -0.36
GID8YMR135C SMC4Q12267 1418 aa12.82□□□□□ -0.36
GID8YMR135C TOP2P06786 1428 aaKnown RBP12.81□□□□□ -0.36
GID8YMR135C RSE1Q04693 1361 aaKnown RBP12.78□□□□□ -0.36
GID8YMR135C YCF1P39109 1515 aaKnown RBP12.76□□□□□ -0.37
GID8YMR135C IKI3Q06706 1349 aaKnown RBP12.76□□□□□ -0.37
GID8YMR135C SNQ2P32568 1501 aaKnown RBP12.71□□□□□ -0.37
GID8YMR135C NUP170P38181 1502 aa12.68□□□□□ -0.38
GID8YMR135C TY2B-LR1P0C2J3 1770 aa12.68□□□□□ -0.38
GID8YMR135C TY2B-FP0CX63 1770 aa12.68□□□□□ -0.38
GID8YMR135C TY2B-GR2P0CX64 1770 aa12.68□□□□□ -0.38
GID8YMR135C TY2B-CP25384 1770 aa12.68□□□□□ -0.38
GID8YMR135C TY2B-DR2Q03494 1770 aa12.68□□□□□ -0.38
GID8YMR135C TY1B-DR1Q03855 1755 aa12.68□□□□□ -0.38
GID8YMR135C TY2B-DR3Q07791 1770 aaKnown RBP12.68□□□□□ -0.38
GID8YMR135C TY2B-OR1Q12113 1770 aa12.68□□□□□ -0.38
GID8YMR135C TY2B-DR1Q12472 1770 aa12.68□□□□□ -0.38
GID8YMR135C TY2B-OR2Q12501 1770 aa12.68□□□□□ -0.38
GID8YMR135C TAF7Q05021 590 aa12.68□□□□□ -0.38
GID8YMR135C TY1B-DR3Q99231 1755 aa12.67□□□□□ -0.38
GID8YMR135C STH1P32597 1359 aa12.65□□□□□ -0.38
GID8YMR135C SPP41P38904 1435 aa12.59□□□□□ -0.39
GID8YMR135C TY2B-BQ12491 1770 aa12.58□□□□□ -0.4
GID8YMR135C ISW2Q08773 1120 aa12.57□□□□□ -0.4
GID8YMR135C MLP2P40457 1679 aa12.57□□□□□ -0.4
GID8YMR135C SSM4P40318 1319 aa12.56□□□□□ -0.4
GID8YMR135C PDR15Q04182 1529 aaKnown RBP12.55□□□□□ -0.4
GID8YMR135C GEA1P47102 1408 aaPredicted RBP12.53□□□□□ -0.4
GID8YMR135C ULS1Q08562 1619 aa12.51□□□□□ -0.41
GID8YMR135C TY1B-HO13535 1793 aa12.47□□□□□ -0.41
GID8YMR135C TY1B-DR5P0C2I2 1755 aa12.47□□□□□ -0.41
GID8YMR135C TY1B-DR6P0C2I3 1755 aa12.47□□□□□ -0.41
GID8YMR135C TY1B-LR2P0C2I5 1755 aa12.47□□□□□ -0.41
GID8YMR135C TY1B-LR3P0C2I6 1755 aaKnown RBP12.47□□□□□ -0.41
GID8YMR135C TY1B-PR1P0C2I9 1755 aaKnown RBP12.47□□□□□ -0.41
GID8YMR135C TY1B-PR2P0C2J0 1756 aa12.47□□□□□ -0.41
GID8YMR135C TY1B-PR3P0C2J1 1755 aaKnown RBP12.47□□□□□ -0.41
GID8YMR135C TY1B-JR1P47098 1755 aa12.47□□□□□ -0.41
GID8YMR135C TY1B-ML2Q03434 1755 aaKnown RBP12.47□□□□□ -0.41
GID8YMR135C TY1B-ER1Q03612 1755 aa12.47□□□□□ -0.41
GID8YMR135C TY1B-ML1Q04711 1755 aaKnown RBP12.47□□□□□ -0.41
GID8YMR135C TY1B-GR2Q12269 1755 aa12.47□□□□□ -0.41
GID8YMR135C TY1B-OLQ12273 1755 aa12.47□□□□□ -0.41
GID8YMR135C TY1B-PLQ12414 1755 aaKnown RBP12.47□□□□□ -0.41
GID8YMR135C RPG1P38249 964 aaKnown RBP12.45□□□□□ -0.42
GID8YMR135C TSR3Q12094 313 aaKnown RBP12.44□□□□□ -0.42
GID8YMR135C TY1B-BRQ12193 1756 aa12.44□□□□□ -0.42
GID8YMR135C TY1B-GR3Q12316 1755 aa12.44□□□□□ -0.42
GID8YMR135C TY1B-ORQ92393 1755 aa12.44□□□□□ -0.42
GID8YMR135C TSC11P40061 1430 aa12.44□□□□□ -0.42
GID8YMR135C IFH1P39520 1085 aa12.43□□□□□ -0.42
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms