RNA–Protein interactions for RNA: YMR094W

CTF13, Transcript of Subunit of the CBF3 complex, yeastyeast

Gene CTF13, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF13YMR094W MTC1P47018 478 aaKnown RBP15.45■□□□□ 0.06
CTF13YMR094W DRS1P32892 752 aaKnown RBP14.59□□□□□ -0.07
CTF13YMR094W FAP1P53971 965 aa13.79□□□□□ -0.2
CTF13YMR094W PRI1P10363 409 aa12.96□□□□□ -0.34
CTF13YMR094W PRY3P47033 881 aa12.93□□□□□ -0.34
CTF13YMR094W AAD16Q02895 342 aa12.88□□□□□ -0.35
CTF13YMR094W ISW2Q08773 1120 aa12.8□□□□□ -0.36
CTF13YMR094W DIP2Q12220 943 aaPredicted RBP12.75□□□□□ -0.37
CTF13YMR094W RPG1P38249 964 aaKnown RBP12.66□□□□□ -0.38
CTF13YMR094W AVT3P36062 692 aa12.31□□□□□ -0.44
CTF13YMR094W RSE1Q04693 1361 aaKnown RBP12.29□□□□□ -0.44
CTF13YMR094W TSR3Q12094 313 aaKnown RBP12.27□□□□□ -0.45
CTF13YMR094W BFR2Q06631 534 aaKnown RBP12.2□□□□□ -0.46
CTF13YMR094W YCK3P39962 524 aa12.18□□□□□ -0.46
CTF13YMR094W HAA1Q12753 694 aaKnown RBP12.14□□□□□ -0.47
CTF13YMR094W RPL17AP05740 184 aaKnown RBP11.88□□□□□ -0.51
CTF13YMR094W RPL17BP46990 184 aaKnown RBP11.88□□□□□ -0.51
CTF13YMR094W REB1P21538 810 aa11.83□□□□□ -0.52
CTF13YMR094W MRPL32P25348 183 aa11.8□□□□□ -0.52
CTF13YMR094W SPT21P35209 758 aa11.35□□□□□ -0.59
CTF13YMR094W YGL015CP33199 130 aa11.27□□□□□ -0.6
CTF13YMR094W YKR023WP36119 530 aaKnown RBP11.21□□□□□ -0.61
CTF13YMR094W CDC27P38042 758 aa11.21□□□□□ -0.61
CTF13YMR094W HOP09932 586 aa11.01□□□□□ -0.65
CTF13YMR094W RIM101P33400 625 aa11.01□□□□□ -0.65
CTF13YMR094W TFC8Q12308 588 aa10.99□□□□□ -0.65
CTF13YMR094W DCD1P06773 312 aa10.94□□□□□ -0.66
CTF13YMR094W UBP10P53874 792 aaPredicted RBP10.86□□□□□ -0.67
CTF13YMR094W MAP2P38174 421 aaKnown RBP10.84□□□□□ -0.67
CTF13YMR094W TFA1P36100 482 aa10.82□□□□□ -0.68
CTF13YMR094W SCY1P53009 804 aa10.67□□□□□ -0.7
CTF13YMR094W BCH2P36122 765 aa10.65□□□□□ -0.7
CTF13YMR094W OXP1P28273 1286 aa10.64□□□□□ -0.71
CTF13YMR094W YIL055CP40523 627 aaKnown RBP10.52□□□□□ -0.73
CTF13YMR094W SLX5P32828 619 aaKnown RBP10.51□□□□□ -0.73
CTF13YMR094W PTP3P40048 928 aa10.5□□□□□ -0.73
CTF13YMR094W BUD31P25337 157 aaPredicted RBP10.47□□□□□ -0.73
CTF13YMR094W TIF4632P39936 914 aaKnown RBP10.44□□□□□ -0.74
CTF13YMR094W TGL3P40308 642 aa10.4□□□□□ -0.75
CTF13YMR094W EPS1P40557 701 aa10.39□□□□□ -0.75
CTF13YMR094W YAH1Q12184 172 aaKnown RBP10.37□□□□□ -0.75
CTF13YMR094W BDF1P35817 686 aa10.34□□□□□ -0.75
CTF13YMR094W RSM7P47150 247 aa10.34□□□□□ -0.75
CTF13YMR094W BBC1P47068 1157 aa10.24□□□□□ -0.77
CTF13YMR094W AI2P03876 854 aa10.24□□□□□ -0.77
CTF13YMR094W YLR271WQ06152 274 aa10.19□□□□□ -0.78
CTF13YMR094W SSP1P38871 571 aa10.1□□□□□ -0.79
CTF13YMR094W UBP9P39967 754 aa10.05□□□□□ -0.8
CTF13YMR094W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.04□□□□□ -0.8not detected
CTF13YMR094W PSD2P53037 1138 aaKnown RBP10.01□□□□□ -0.81
CTF13YMR094W MST1P07236 462 aa9.96□□□□□ -0.82
CTF13YMR094W YOR238WQ08634 303 aa9.96□□□□□ -0.82
CTF13YMR094W NSR1P27476 414 aaKnown RBP RIP-Chip data9.94□□□□□ -0.82not detected
CTF13YMR094W YAP5P40574 245 aa9.9□□□□□ -0.82
CTF13YMR094W MRM1P25270 412 aa9.88□□□□□ -0.83
CTF13YMR094W SIS1P25294 352 aaKnown RBP9.86□□□□□ -0.83
CTF13YMR094W MGA2P40578 1113 aa9.85□□□□□ -0.83
CTF13YMR094W CST9Q06032 482 aa9.83□□□□□ -0.84
CTF13YMR094W YBL029C-AQ3E756 94 aa9.78□□□□□ -0.84
CTF13YMR094W PIB1Q06651 286 aa9.7□□□□□ -0.86
CTF13YMR094W GTT3P39996 337 aa9.69□□□□□ -0.86
CTF13YMR094W VNX1P42839 908 aa9.69□□□□□ -0.86
CTF13YMR094W RTG3P38165 486 aa9.68□□□□□ -0.86
CTF13YMR094W WSC3Q12215 556 aa9.68□□□□□ -0.86
CTF13YMR094W VPS29P38759 282 aa9.65□□□□□ -0.87
CTF13YMR094W YMR1P47147 688 aaKnown RBP RIP-Chip data9.63□□□□□ -0.87not detected
CTF13YMR094W SPP1Q03012 353 aa9.62□□□□□ -0.87
CTF13YMR094W DBP1P24784 617 aaKnown RBP9.59□□□□□ -0.87
CTF13YMR094W RCR1P38212 213 aa9.58□□□□□ -0.88
CTF13YMR094W YFR006WP43590 535 aa9.56□□□□□ -0.88
CTF13YMR094W STS1P38637 319 aa9.54□□□□□ -0.88
CTF13YMR094W TIF11P38912 153 aaKnown RBP9.53□□□□□ -0.88
CTF13YMR094W VMA1P17255 1071 aaKnown RBP9.46□□□□□ -0.9
CTF13YMR094W ULI1P43604 169 aa9.45□□□□□ -0.9
CTF13YMR094W MSB4Q12317 492 aa9.44□□□□□ -0.9
CTF13YMR094W SET4P42948 560 aa9.42□□□□□ -0.9
CTF13YMR094W YOL036WQ08206 761 aa9.42□□□□□ -0.9
CTF13YMR094W EAP1P36041 632 aaKnown RBP9.39□□□□□ -0.91
CTF13YMR094W IOC2Q12072 812 aa9.39□□□□□ -0.91
CTF13YMR094W SAM3Q08986 587 aa9.39□□□□□ -0.91
CTF13YMR094W LDB19Q12502 818 aa9.38□□□□□ -0.91
CTF13YMR094W FKH1P40466 484 aa9.35□□□□□ -0.91
CTF13YMR094W RAM2P29703 316 aa9.34□□□□□ -0.91
CTF13YMR094W AIR2Q12476 344 aaKnown RBP9.34□□□□□ -0.91
CTF13YMR094W TRP5P00931 707 aaKnown RBP9.32□□□□□ -0.92
CTF13YMR094W MAK11P20484 414 aaKnown RBP9.3□□□□□ -0.92
CTF13YMR094W YJL171CP46992 396 aa9.29□□□□□ -0.92
CTF13YMR094W GYP5Q12344 894 aa9.29□□□□□ -0.92
CTF13YMR094W RTG1P32607 177 aa9.25□□□□□ -0.93
CTF13YMR094W MIF2P35201 549 aa9.25□□□□□ -0.93
CTF13YMR094W ABP1P15891 592 aaKnown RBP9.23□□□□□ -0.93
CTF13YMR094W DCW1P36091 449 aa9.22□□□□□ -0.93
CTF13YMR094W YNL035CP53962 389 aaKnown RBP9.22□□□□□ -0.93
CTF13YMR094W NCR1Q12200 1170 aa9.2□□□□□ -0.94
CTF13YMR094W HTA1P04911 132 aaKnown RBP9.19□□□□□ -0.94
CTF13YMR094W HTA2P04912 132 aa9.19□□□□□ -0.94
CTF13YMR094W SEC61P32915 480 aa9.18□□□□□ -0.94
CTF13YMR094W EDS1P38073 919 aa9.18□□□□□ -0.94
CTF13YMR094W GRE2Q12068 342 aaKnown RBP9.18□□□□□ -0.94
CTF13YMR094W COQ8P27697 501 aa9.17□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms