RNA–Protein interactions for RNA: YMR071C

TVP18, Transcript of Integral membrane protein, yeastyeast

Gene TVP18, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP18YMR071C MTC1P47018 478 aaKnown RBP10□□□□□ -0.81
TVP18YMR071C FAP1P53971 965 aa9.53□□□□□ -0.88
TVP18YMR071C DRS1P32892 752 aaKnown RBP9.12□□□□□ -0.95
TVP18YMR071C PRY3P47033 881 aa9□□□□□ -0.97
TVP18YMR071C PRI1P10363 409 aa8.55□□□□□ -1.04
TVP18YMR071C AAD16Q02895 342 aa8.53□□□□□ -1.04
TVP18YMR071C YCK3P39962 524 aa8.42□□□□□ -1.06
TVP18YMR071C HAA1Q12753 694 aaKnown RBP8.37□□□□□ -1.07
TVP18YMR071C ISW2Q08773 1120 aa8.32□□□□□ -1.08
TVP18YMR071C RPG1P38249 964 aaKnown RBP8.26□□□□□ -1.09
TVP18YMR071C DIP2Q12220 943 aaPredicted RBP8.08□□□□□ -1.12
TVP18YMR071C TSR3Q12094 313 aaKnown RBP8.07□□□□□ -1.12
TVP18YMR071C RSE1Q04693 1361 aaKnown RBP7.85□□□□□ -1.15
TVP18YMR071C MRPL32P25348 183 aa7.74□□□□□ -1.17
TVP18YMR071C AVT3P36062 692 aa7.73□□□□□ -1.17
TVP18YMR071C RPL17AP05740 184 aaKnown RBP7.63□□□□□ -1.19
TVP18YMR071C RPL17BP46990 184 aaKnown RBP7.63□□□□□ -1.19
TVP18YMR071C REB1P21538 810 aa7.6□□□□□ -1.19
TVP18YMR071C YGL015CP33199 130 aa7.53□□□□□ -1.2
TVP18YMR071C BFR2Q06631 534 aaKnown RBP7.47□□□□□ -1.21
TVP18YMR071C BUD31P25337 157 aaPredicted RBP7.41□□□□□ -1.22
TVP18YMR071C CDC27P38042 758 aa7.34□□□□□ -1.23
TVP18YMR071C SPT21P35209 758 aa7.29□□□□□ -1.24
TVP18YMR071C YKR023WP36119 530 aaKnown RBP7.27□□□□□ -1.25
TVP18YMR071C UBP10P53874 792 aaPredicted RBP7.14□□□□□ -1.27
TVP18YMR071C MAP2P38174 421 aaKnown RBP7.13□□□□□ -1.27
TVP18YMR071C HOP09932 586 aa7.12□□□□□ -1.27
TVP18YMR071C TFC8Q12308 588 aa7.12□□□□□ -1.27
TVP18YMR071C DCD1P06773 312 aa7.09□□□□□ -1.27
TVP18YMR071C TFA1P36100 482 aa7.06□□□□□ -1.28
TVP18YMR071C RIM101P33400 625 aa6.99□□□□□ -1.29
TVP18YMR071C SIS1P25294 352 aaKnown RBP6.97□□□□□ -1.29
TVP18YMR071C SCY1P53009 804 aa6.94□□□□□ -1.3
TVP18YMR071C BCH2P36122 765 aa6.88□□□□□ -1.31
TVP18YMR071C SLX5P32828 619 aaKnown RBP6.86□□□□□ -1.31
TVP18YMR071C TIF4632P39936 914 aaKnown RBP6.85□□□□□ -1.31
TVP18YMR071C TGL3P40308 642 aa6.83□□□□□ -1.32
TVP18YMR071C OXP1P28273 1286 aa6.76□□□□□ -1.33
TVP18YMR071C UBP9P39967 754 aa6.76□□□□□ -1.33
TVP18YMR071C EPS1P40557 701 aa6.68□□□□□ -1.34
TVP18YMR071C BDF1P35817 686 aa6.67□□□□□ -1.34
TVP18YMR071C YIL055CP40523 627 aaKnown RBP6.64□□□□□ -1.35
TVP18YMR071C PTP3P40048 928 aa6.63□□□□□ -1.35
TVP18YMR071C RSM7P47150 247 aa6.55□□□□□ -1.36
TVP18YMR071C MST1P07236 462 aa6.53□□□□□ -1.36
TVP18YMR071C BBC1P47068 1157 aa6.51□□□□□ -1.37
TVP18YMR071C YAH1Q12184 172 aaKnown RBP6.51□□□□□ -1.37
TVP18YMR071C AI2P03876 854 aa6.5□□□□□ -1.37
TVP18YMR071C YOR238WQ08634 303 aa6.49□□□□□ -1.37
TVP18YMR071C NSR1P27476 414 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38 RIP-Chip
TVP18YMR071C YBL029C-AQ3E756 94 aa6.45□□□□□ -1.38
TVP18YMR071C YAP5P40574 245 aa6.41□□□□□ -1.38
TVP18YMR071C YLR271WQ06152 274 aa6.41□□□□□ -1.38
TVP18YMR071C VNX1P42839 908 aa6.37□□□□□ -1.39
TVP18YMR071C PSD2P53037 1138 aaKnown RBP6.34□□□□□ -1.39
TVP18YMR071C WSC3Q12215 556 aa6.32□□□□□ -1.4
TVP18YMR071C SPP1Q03012 353 aa6.3□□□□□ -1.4
TVP18YMR071C MRM1P25270 412 aa6.26□□□□□ -1.41
TVP18YMR071C SSP1P38871 571 aa6.26□□□□□ -1.41
TVP18YMR071C GTT3P39996 337 aa6.26□□□□□ -1.41
TVP18YMR071C RQC2Q12532 1038 aaKnown RBP6.26□□□□□ -1.41
TVP18YMR071C TIF11P38912 153 aaKnown RBP6.24□□□□□ -1.41
TVP18YMR071C PIB1Q06651 286 aa6.24□□□□□ -1.41
TVP18YMR071C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
TVP18YMR071C AIR2Q12476 344 aaKnown RBP6.2□□□□□ -1.42
TVP18YMR071C FKH1P40466 484 aa6.18□□□□□ -1.42
TVP18YMR071C CST9Q06032 482 aa6.18□□□□□ -1.42
TVP18YMR071C ULI1P43604 169 aa6.16□□□□□ -1.42
TVP18YMR071C IOC2Q12072 812 aa6.15□□□□□ -1.42
TVP18YMR071C VPS29P38759 282 aa6.14□□□□□ -1.43
TVP18YMR071C MGA2P40578 1113 aa6.14□□□□□ -1.43
TVP18YMR071C LDB19Q12502 818 aa6.14□□□□□ -1.43
TVP18YMR071C YJL171CP46992 396 aa6.13□□□□□ -1.43
TVP18YMR071C YMR1P47147 688 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43not detected
TVP18YMR071C DBP1P24784 617 aaKnown RBP6.11□□□□□ -1.43
TVP18YMR071C RTG3P38165 486 aa6.11□□□□□ -1.43
TVP18YMR071C MSB4Q12317 492 aa6.11□□□□□ -1.43
TVP18YMR071C YFR006WP43590 535 aa6.09□□□□□ -1.43
TVP18YMR071C EAP1P36041 632 aaKnown RBP6.08□□□□□ -1.44
TVP18YMR071C SET4P42948 560 aa6.08□□□□□ -1.44
TVP18YMR071C YOL036WQ08206 761 aa6.08□□□□□ -1.44
TVP18YMR071C STS1P38637 319 aa6.07□□□□□ -1.44
TVP18YMR071C VMA1P17255 1071 aaKnown RBP6.05□□□□□ -1.44
TVP18YMR071C RCR1P38212 213 aa6.05□□□□□ -1.44
TVP18YMR071C TRP5P00931 707 aaKnown RBP6.04□□□□□ -1.44
TVP18YMR071C BMT6Q12291 365 aa6.04□□□□□ -1.44
TVP18YMR071C SAM3Q08986 587 aa6.03□□□□□ -1.44
TVP18YMR071C RTG1P32607 177 aa6.02□□□□□ -1.45
TVP18YMR071C YNL035CP53962 389 aaKnown RBP5.99□□□□□ -1.45
TVP18YMR071C NCR1Q12200 1170 aa5.99□□□□□ -1.45
TVP18YMR071C SEC61P32915 480 aa5.96□□□□□ -1.46
TVP18YMR071C GYP5Q12344 894 aa5.93□□□□□ -1.46
TVP18YMR071C DAN4P47179 1161 aa5.91□□□□□ -1.46
TVP18YMR071C ABP1P15891 592 aaKnown RBP5.9□□□□□ -1.46
TVP18YMR071C JIP4Q03361 876 aa5.9□□□□□ -1.46
TVP18YMR071C DCW1P36091 449 aa5.89□□□□□ -1.47
TVP18YMR071C DMA1P38823 416 aa5.89□□□□□ -1.47
TVP18YMR071C HTA1P04911 132 aaKnown RBP5.88□□□□□ -1.47
TVP18YMR071C HTA2P04912 132 aa5.88□□□□□ -1.47
TVP18YMR071C TFG1P41895 735 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms