RNA–Protein interactions for RNA: YMR046C

YMR046C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YMR046C, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR046CYMR046C FAP1P53971 965 aa14.41□□□□□ -0.1
YMR046CYMR046C MTC1P47018 478 aaKnown RBP14.31□□□□□ -0.12
YMR046CYMR046C PRY3P47033 881 aa13.57□□□□□ -0.24
YMR046CYMR046C AAD16Q02895 342 aa12.89□□□□□ -0.35
YMR046CYMR046C PRI1P10363 409 aa12.79□□□□□ -0.36
YMR046CYMR046C YCK3P39962 524 aa12.67□□□□□ -0.38
YMR046CYMR046C HAA1Q12753 694 aaKnown RBP12.63□□□□□ -0.39
YMR046CYMR046C ISW2Q08773 1120 aa12.18□□□□□ -0.46
YMR046CYMR046C DRS1P32892 752 aaKnown RBP12.12□□□□□ -0.47
YMR046CYMR046C RPG1P38249 964 aaKnown RBP12.09□□□□□ -0.47
YMR046CYMR046C TSR3Q12094 313 aaKnown RBP12.05□□□□□ -0.48
YMR046CYMR046C MRPL32P25348 183 aa11.6□□□□□ -0.55
YMR046CYMR046C YGL015CP33199 130 aa11.47□□□□□ -0.57
YMR046CYMR046C DIP2Q12220 943 aaPredicted RBP11.09□□□□□ -0.63
YMR046CYMR046C RSE1Q04693 1361 aaKnown RBP11.07□□□□□ -0.64
YMR046CYMR046C BUD31P25337 157 aaPredicted RBP11.04□□□□□ -0.64
YMR046CYMR046C REB1P21538 810 aa10.91□□□□□ -0.66
YMR046CYMR046C RPL17AP05740 184 aaKnown RBP10.82□□□□□ -0.68
YMR046CYMR046C RPL17BP46990 184 aaKnown RBP10.82□□□□□ -0.68
YMR046CYMR046C CDC27P38042 758 aa10.74□□□□□ -0.69
YMR046CYMR046C UBP10P53874 792 aaPredicted RBP10.59□□□□□ -0.71
YMR046CYMR046C MAP2P38174 421 aaKnown RBP10.58□□□□□ -0.72
YMR046CYMR046C SIS1P25294 352 aaKnown RBP10.45□□□□□ -0.74
YMR046CYMR046C YKR023WP36119 530 aaKnown RBP10.39□□□□□ -0.75
YMR046CYMR046C UBP9P39967 754 aa10.29□□□□□ -0.76
YMR046CYMR046C AVT3P36062 692 aa10.27□□□□□ -0.77
YMR046CYMR046C TIF4632P39936 914 aaKnown RBP10.23□□□□□ -0.77
YMR046CYMR046C HOP09932 586 aa10.22□□□□□ -0.77
YMR046CYMR046C DCD1P06773 312 aa10.21□□□□□ -0.78
YMR046CYMR046C TFC8Q12308 588 aa10.19□□□□□ -0.78
YMR046CYMR046C SPT21P35209 758 aa10.18□□□□□ -0.78
YMR046CYMR046C TGL3P40308 642 aa10.17□□□□□ -0.78
YMR046CYMR046C SCY1P53009 804 aa10.14□□□□□ -0.79
YMR046CYMR046C SLX5P32828 619 aaKnown RBP10.08□□□□□ -0.8
YMR046CYMR046C BCH2P36122 765 aa9.82□□□□□ -0.84
YMR046CYMR046C BFR2Q06631 534 aaKnown RBP9.65□□□□□ -0.86
YMR046CYMR046C YBL029C-AQ3E756 94 aa9.65□□□□□ -0.86
YMR046CYMR046C RIM101P33400 625 aa9.56□□□□□ -0.88
YMR046CYMR046C MST1P07236 462 aa9.56□□□□□ -0.88
YMR046CYMR046C YOR238WQ08634 303 aa9.52□□□□□ -0.89
YMR046CYMR046C VNX1P42839 908 aa9.49□□□□□ -0.89
YMR046CYMR046C BDF1P35817 686 aa9.48□□□□□ -0.89
YMR046CYMR046C EPS1P40557 701 aa9.48□□□□□ -0.89
YMR046CYMR046C SPP1Q03012 353 aa9.42□□□□□ -0.9
YMR046CYMR046C YJL171CP46992 396 aa9.38□□□□□ -0.91
YMR046CYMR046C WSC3Q12215 556 aa9.33□□□□□ -0.92
YMR046CYMR046C AIR2Q12476 344 aaKnown RBP9.31□□□□□ -0.92
YMR046CYMR046C NSR1P27476 414 aaKnown RBP RIP-Chip data9.29□□□□□ -0.92not detected
YMR046CYMR046C YAP5P40574 245 aa9.25□□□□□ -0.93
YMR046CYMR046C FKH1P40466 484 aa9.24□□□□□ -0.93
YMR046CYMR046C OXP1P28273 1286 aa9.21□□□□□ -0.94
YMR046CYMR046C TIF11P38912 153 aaKnown RBP9.21□□□□□ -0.94
YMR046CYMR046C PTP3P40048 928 aa9.18□□□□□ -0.94
YMR046CYMR046C YIL055CP40523 627 aaKnown RBP9.16□□□□□ -0.94
YMR046CYMR046C GTT3P39996 337 aa9.12□□□□□ -0.95
YMR046CYMR046C BBC1P47068 1157 aa9.12□□□□□ -0.95
YMR046CYMR046C BMT6Q12291 365 aa9.1□□□□□ -0.95
YMR046CYMR046C LDB19Q12502 818 aa9.09□□□□□ -0.95
YMR046CYMR046C TFA1P36100 482 aa9.05□□□□□ -0.96
YMR046CYMR046C ULI1P43604 169 aa9.05□□□□□ -0.96
YMR046CYMR046C AI2P03876 854 aa9□□□□□ -0.97
YMR046CYMR046C IOC2Q12072 812 aa9□□□□□ -0.97
YMR046CYMR046C RSM7P47150 247 aa8.98□□□□□ -0.97
YMR046CYMR046C PIB1Q06651 286 aa8.89□□□□□ -0.99
YMR046CYMR046C EAP1P36041 632 aaKnown RBP8.82□□□□□ -1
YMR046CYMR046C RTG1P32607 177 aa8.81□□□□□ -1
YMR046CYMR046C YAH1Q12184 172 aaKnown RBP8.81□□□□□ -1
YMR046CYMR046C NCR1Q12200 1170 aa8.8□□□□□ -1
YMR046CYMR046C MSB4Q12317 492 aa8.8□□□□□ -1
YMR046CYMR046C TRP5P00931 707 aaKnown RBP8.72□□□□□ -1.01
YMR046CYMR046C SET4P42948 560 aa8.72□□□□□ -1.01
YMR046CYMR046C YOL036WQ08206 761 aa8.69□□□□□ -1.02
YMR046CYMR046C SEC61P32915 480 aa8.68□□□□□ -1.02
YMR046CYMR046C YNL035CP53962 389 aaKnown RBP8.68□□□□□ -1.02
YMR046CYMR046C TFG1P41895 735 aaPredicted RBP8.63□□□□□ -1.03
YMR046CYMR046C BCK2P33306 851 aa8.62□□□□□ -1.03
YMR046CYMR046C MRM1P25270 412 aa8.61□□□□□ -1.03
YMR046CYMR046C PSD2P53037 1138 aaKnown RBP8.57□□□□□ -1.04
YMR046CYMR046C YLR271WQ06152 274 aa8.57□□□□□ -1.04
YMR046CYMR046C SAP30P38429 201 aa8.56□□□□□ -1.04
YMR046CYMR046C CHL1P22516 861 aaPredicted RBP8.52□□□□□ -1.05
YMR046CYMR046C DBP1P24784 617 aaKnown RBP8.51□□□□□ -1.05
YMR046CYMR046C YMR1P47147 688 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
YMR046CYMR046C VMA1P17255 1071 aaKnown RBP8.47□□□□□ -1.05
YMR046CYMR046C YFR006WP43590 535 aa8.47□□□□□ -1.05
YMR046CYMR046C YDL129WQ07555 291 aa8.45□□□□□ -1.06
YMR046CYMR046C PRE3P38624 215 aa8.44□□□□□ -1.06
YMR046CYMR046C DAN4P47179 1161 aa8.44□□□□□ -1.06
YMR046CYMR046C JIP4Q03361 876 aa8.44□□□□□ -1.06
YMR046CYMR046C SAM3Q08986 587 aa8.44□□□□□ -1.06
YMR046CYMR046C VPS29P38759 282 aa8.41□□□□□ -1.06
YMR046CYMR046C STS1P38637 319 aa8.37□□□□□ -1.07
YMR046CYMR046C RTG3P38165 486 aa8.34□□□□□ -1.07
YMR046CYMR046C XDJ1P39102 459 aa8.34□□□□□ -1.07
YMR046CYMR046C VRP1P37370 817 aa8.33□□□□□ -1.08
YMR046CYMR046C ABP1P15891 592 aaKnown RBP8.31□□□□□ -1.08
YMR046CYMR046C GYP5Q12344 894 aa8.31□□□□□ -1.08
YMR046CYMR046C HTA1P04911 132 aaKnown RBP8.29□□□□□ -1.08
YMR046CYMR046C HTA2P04912 132 aa8.29□□□□□ -1.08
YMR046CYMR046C PTC4P38089 393 aa8.29□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms