RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C FAP1P53971 965 aa11.57□□□□□ -0.56
VPS9YML097C MTC1P47018 478 aaKnown RBP11.42□□□□□ -0.58
VPS9YML097C PRY3P47033 881 aa10.9□□□□□ -0.67
VPS9YML097C AAD16Q02895 342 aa10.25□□□□□ -0.77
VPS9YML097C PRI1P10363 409 aa10.15□□□□□ -0.78
VPS9YML097C YCK3P39962 524 aa10.05□□□□□ -0.8
VPS9YML097C HAA1Q12753 694 aaKnown RBP10□□□□□ -0.81
VPS9YML097C DRS1P32892 752 aaKnown RBP9.86□□□□□ -0.83
VPS9YML097C ISW2Q08773 1120 aa9.73□□□□□ -0.85
VPS9YML097C RPG1P38249 964 aaKnown RBP9.7□□□□□ -0.86
VPS9YML097C TSR3Q12094 313 aaKnown RBP9.67□□□□□ -0.86
VPS9YML097C MRPL32P25348 183 aa9.25□□□□□ -0.93
VPS9YML097C YGL015CP33199 130 aa9.08□□□□□ -0.96
VPS9YML097C DIP2Q12220 943 aaPredicted RBP8.94□□□□□ -0.98
VPS9YML097C RSE1Q04693 1361 aaKnown RBP8.88□□□□□ -0.99
VPS9YML097C REB1P21538 810 aa8.8□□□□□ -1
VPS9YML097C RPL17AP05740 184 aaKnown RBP8.72□□□□□ -1.01
VPS9YML097C RPL17BP46990 184 aaKnown RBP8.72□□□□□ -1.01
VPS9YML097C BUD31P25337 157 aaPredicted RBP8.7□□□□□ -1.02
VPS9YML097C CDC27P38042 758 aa8.6□□□□□ -1.03
VPS9YML097C MAP2P38174 421 aaKnown RBP8.46□□□□□ -1.06
VPS9YML097C UBP10P53874 792 aaPredicted RBP8.36□□□□□ -1.07
VPS9YML097C SIS1P25294 352 aaKnown RBP8.32□□□□□ -1.08
VPS9YML097C DCD1P06773 312 aa8.3□□□□□ -1.08
VPS9YML097C YKR023WP36119 530 aaKnown RBP8.3□□□□□ -1.08
VPS9YML097C HOP09932 586 aa8.26□□□□□ -1.09
VPS9YML097C AVT3P36062 692 aa8.24□□□□□ -1.09
VPS9YML097C BFR2Q06631 534 aaKnown RBP8.21□□□□□ -1.1
VPS9YML097C SCY1P53009 804 aa8.16□□□□□ -1.1
VPS9YML097C UBP9P39967 754 aa8.13□□□□□ -1.11
VPS9YML097C TFC8Q12308 588 aa8.13□□□□□ -1.11
VPS9YML097C SPT21P35209 758 aa8.12□□□□□ -1.11
VPS9YML097C TIF4632P39936 914 aaKnown RBP8.11□□□□□ -1.11
VPS9YML097C SLX5P32828 619 aaKnown RBP8.06□□□□□ -1.12
VPS9YML097C TGL3P40308 642 aa8.02□□□□□ -1.13
VPS9YML097C TFA1P36100 482 aa7.96□□□□□ -1.14
VPS9YML097C BCH2P36122 765 aa7.86□□□□□ -1.15
VPS9YML097C YBL029C-AQ3E756 94 aa7.73□□□□□ -1.17
VPS9YML097C RIM101P33400 625 aa7.63□□□□□ -1.19
VPS9YML097C EPS1P40557 701 aa7.61□□□□□ -1.19
VPS9YML097C BDF1P35817 686 aa7.59□□□□□ -1.2
VPS9YML097C YOR238WQ08634 303 aa7.56□□□□□ -1.2
VPS9YML097C WSC3Q12215 556 aa7.54□□□□□ -1.2
VPS9YML097C VNX1P42839 908 aa7.52□□□□□ -1.21
VPS9YML097C SPP1Q03012 353 aa7.52□□□□□ -1.21
VPS9YML097C MST1P07236 462 aa7.49□□□□□ -1.21
VPS9YML097C PTP3P40048 928 aa7.46□□□□□ -1.21
VPS9YML097C YJL171CP46992 396 aa7.46□□□□□ -1.21
VPS9YML097C YIL055CP40523 627 aaKnown RBP7.4□□□□□ -1.22
VPS9YML097C OXP1P28273 1286 aa7.39□□□□□ -1.23
VPS9YML097C YAP5P40574 245 aa7.36□□□□□ -1.23
VPS9YML097C AIR2Q12476 344 aaKnown RBP7.36□□□□□ -1.23
VPS9YML097C GTT3P39996 337 aa7.33□□□□□ -1.24
VPS9YML097C BBC1P47068 1157 aa7.32□□□□□ -1.24
VPS9YML097C TIF11P38912 153 aaKnown RBP7.31□□□□□ -1.24
VPS9YML097C FKH1P40466 484 aa7.3□□□□□ -1.24
VPS9YML097C RQC2Q12532 1038 aaKnown RBP7.27□□□□□ -1.25
VPS9YML097C NSR1P27476 414 aaKnown RBP RIP-Chip data7.26□□□□□ -1.25not detected
VPS9YML097C PIB1Q06651 286 aa7.25□□□□□ -1.25
VPS9YML097C LDB19Q12502 818 aa7.25□□□□□ -1.25
VPS9YML097C AI2P03876 854 aa7.23□□□□□ -1.25
VPS9YML097C YAH1Q12184 172 aaKnown RBP7.23□□□□□ -1.25
VPS9YML097C BMT6Q12291 365 aa7.22□□□□□ -1.25
VPS9YML097C ULI1P43604 169 aa7.21□□□□□ -1.25
VPS9YML097C RSM7P47150 247 aa7.2□□□□□ -1.26
VPS9YML097C IOC2Q12072 812 aa7.11□□□□□ -1.27
VPS9YML097C RTG1P32607 177 aa7.03□□□□□ -1.28
VPS9YML097C SET4P42948 560 aa7.02□□□□□ -1.29
VPS9YML097C NCR1Q12200 1170 aa7□□□□□ -1.29
VPS9YML097C MRM1P25270 412 aa6.97□□□□□ -1.29
VPS9YML097C TRP5P00931 707 aaKnown RBP6.96□□□□□ -1.29
VPS9YML097C EAP1P36041 632 aaKnown RBP6.96□□□□□ -1.29
VPS9YML097C YOL036WQ08206 761 aa6.95□□□□□ -1.3
VPS9YML097C MSB4Q12317 492 aa6.95□□□□□ -1.3
VPS9YML097C YLR271WQ06152 274 aa6.91□□□□□ -1.3
VPS9YML097C TFG1P41895 735 aaPredicted RBP6.88□□□□□ -1.31
VPS9YML097C YFR006WP43590 535 aa6.88□□□□□ -1.31
VPS9YML097C YNL035CP53962 389 aaKnown RBP6.87□□□□□ -1.31
VPS9YML097C SAP30P38429 201 aa6.85□□□□□ -1.31
VPS9YML097C PSD2P53037 1138 aaKnown RBP6.85□□□□□ -1.31
VPS9YML097C SEC61P32915 480 aa6.84□□□□□ -1.31
VPS9YML097C DBP1P24784 617 aaKnown RBP6.82□□□□□ -1.32
VPS9YML097C BCK2P33306 851 aa6.82□□□□□ -1.32
VPS9YML097C DMA1P38823 416 aa6.82□□□□□ -1.32
VPS9YML097C YMR1P47147 688 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
VPS9YML097C VMA1P17255 1071 aaKnown RBP6.76□□□□□ -1.33
VPS9YML097C VPS29P38759 282 aa6.72□□□□□ -1.33
VPS9YML097C CHL1P22516 861 aaPredicted RBP6.71□□□□□ -1.33
VPS9YML097C STS1P38637 319 aa6.71□□□□□ -1.33
VPS9YML097C YDL129WQ07555 291 aa6.69□□□□□ -1.34
VPS9YML097C RTG3P38165 486 aa6.69□□□□□ -1.34
VPS9YML097C DCW1P36091 449 aa6.68□□□□□ -1.34
VPS9YML097C PRE3P38624 215 aa6.68□□□□□ -1.34
VPS9YML097C DAN4P47179 1161 aa6.68□□□□□ -1.34
VPS9YML097C JIP4Q03361 876 aa6.66□□□□□ -1.34
VPS9YML097C CST9Q06032 482 aa6.66□□□□□ -1.34
VPS9YML097C SAM3Q08986 587 aa6.66□□□□□ -1.34
VPS9YML097C GYP5Q12344 894 aa6.65□□□□□ -1.35
VPS9YML097C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.65□□□□□ -1.35not detected
VPS9YML097C VRP1P37370 817 aa6.64□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms