RNA–Protein interactions for RNA: YLR455W

PDP3, Transcript of Component of the NuA3b histone acetyltransferase complex, yeastyeast

Gene PDP3, Length 915 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDP3YLR455W MTC1P47018 478 aaKnown RBP11.71□□□□□ -0.53
PDP3YLR455W DRS1P32892 752 aaKnown RBP11.05□□□□□ -0.64
PDP3YLR455W FAP1P53971 965 aa10.87□□□□□ -0.67
PDP3YLR455W PRY3P47033 881 aa10.25□□□□□ -0.77
PDP3YLR455W AAD16Q02895 342 aa9.86□□□□□ -0.83
PDP3YLR455W PRI1P10363 409 aa9.85□□□□□ -0.83
PDP3YLR455W ISW2Q08773 1120 aa9.69□□□□□ -0.86
PDP3YLR455W YCK3P39962 524 aa9.68□□□□□ -0.86
PDP3YLR455W DIP2Q12220 943 aaPredicted RBP9.65□□□□□ -0.86
PDP3YLR455W RPG1P38249 964 aaKnown RBP9.58□□□□□ -0.88
PDP3YLR455W HAA1Q12753 694 aaKnown RBP9.5□□□□□ -0.89
PDP3YLR455W TSR3Q12094 313 aaKnown RBP9.33□□□□□ -0.92
PDP3YLR455W AVT3P36062 692 aa9.32□□□□□ -0.92
PDP3YLR455W RSE1Q04693 1361 aaKnown RBP9.29□□□□□ -0.92
PDP3YLR455W BFR2Q06631 534 aaKnown RBP9.24□□□□□ -0.93
PDP3YLR455W RPL17AP05740 184 aaKnown RBP9□□□□□ -0.97
PDP3YLR455W RPL17BP46990 184 aaKnown RBP9□□□□□ -0.97
PDP3YLR455W REB1P21538 810 aa8.95□□□□□ -0.98
PDP3YLR455W MRPL32P25348 183 aa8.92□□□□□ -0.98
PDP3YLR455W YGL015CP33199 130 aa8.67□□□□□ -1.02
PDP3YLR455W SPT21P35209 758 aa8.6□□□□□ -1.03
PDP3YLR455W YKR023WP36119 530 aaKnown RBP8.49□□□□□ -1.05
PDP3YLR455W CDC27P38042 758 aa8.49□□□□□ -1.05
PDP3YLR455W RIM101P33400 625 aa8.33□□□□□ -1.08
PDP3YLR455W HOP09932 586 aa8.32□□□□□ -1.08
PDP3YLR455W TFC8Q12308 588 aa8.32□□□□□ -1.08
PDP3YLR455W DCD1P06773 312 aa8.28□□□□□ -1.08
PDP3YLR455W BUD31P25337 157 aaPredicted RBP8.23□□□□□ -1.09
PDP3YLR455W UBP10P53874 792 aaPredicted RBP8.23□□□□□ -1.09
PDP3YLR455W MAP2P38174 421 aaKnown RBP8.22□□□□□ -1.09
PDP3YLR455W TFA1P36100 482 aa8.19□□□□□ -1.1
PDP3YLR455W SCY1P53009 804 aa8.07□□□□□ -1.12
PDP3YLR455W OXP1P28273 1286 aa8.06□□□□□ -1.12
PDP3YLR455W BCH2P36122 765 aa8.06□□□□□ -1.12
PDP3YLR455W SLX5P32828 619 aaKnown RBP7.96□□□□□ -1.14
PDP3YLR455W YIL055CP40523 627 aaKnown RBP7.96□□□□□ -1.14
PDP3YLR455W PTP3P40048 928 aa7.94□□□□□ -1.14
PDP3YLR455W TIF4632P39936 914 aaKnown RBP7.92□□□□□ -1.14
PDP3YLR455W TGL3P40308 642 aa7.87□□□□□ -1.15
PDP3YLR455W EPS1P40557 701 aa7.86□□□□□ -1.15
PDP3YLR455W YAH1Q12184 172 aaKnown RBP7.85□□□□□ -1.15
PDP3YLR455W RSM7P47150 247 aa7.83□□□□□ -1.16
PDP3YLR455W BDF1P35817 686 aa7.82□□□□□ -1.16
PDP3YLR455W SIS1P25294 352 aaKnown RBP7.79□□□□□ -1.16
PDP3YLR455W BBC1P47068 1157 aa7.76□□□□□ -1.17
PDP3YLR455W AI2P03876 854 aa7.75□□□□□ -1.17
PDP3YLR455W UBP9P39967 754 aa7.73□□□□□ -1.17
PDP3YLR455W YLR271WQ06152 274 aa7.71□□□□□ -1.18
PDP3YLR455W SSP1P38871 571 aa7.65□□□□□ -1.18
PDP3YLR455W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.6□□□□□ -1.19not detected
PDP3YLR455W PSD2P53037 1138 aaKnown RBP7.59□□□□□ -1.19
PDP3YLR455W MST1P07236 462 aa7.54□□□□□ -1.2
PDP3YLR455W NSR1P27476 414 aaKnown RBP RIP-Chip data7.54□□□□□ -1.2not detected
PDP3YLR455W YOR238WQ08634 303 aa7.54□□□□□ -1.2
PDP3YLR455W YAP5P40574 245 aa7.5□□□□□ -1.21
PDP3YLR455W MRM1P25270 412 aa7.47□□□□□ -1.21
PDP3YLR455W YBL029C-AQ3E756 94 aa7.46□□□□□ -1.22
PDP3YLR455W MGA2P40578 1113 aa7.45□□□□□ -1.22
PDP3YLR455W CST9Q06032 482 aa7.45□□□□□ -1.22
PDP3YLR455W GTT3P39996 337 aa7.34□□□□□ -1.23
PDP3YLR455W VNX1P42839 908 aa7.34□□□□□ -1.23
PDP3YLR455W PIB1Q06651 286 aa7.34□□□□□ -1.23
PDP3YLR455W RTG3P38165 486 aa7.33□□□□□ -1.24
PDP3YLR455W WSC3Q12215 556 aa7.32□□□□□ -1.24
PDP3YLR455W VPS29P38759 282 aa7.3□□□□□ -1.24
PDP3YLR455W YMR1P47147 688 aaKnown RBP RIP-Chip data7.29□□□□□ -1.24not detected
PDP3YLR455W SPP1Q03012 353 aa7.27□□□□□ -1.25
PDP3YLR455W DBP1P24784 617 aaKnown RBP7.25□□□□□ -1.25
PDP3YLR455W RCR1P38212 213 aa7.25□□□□□ -1.25
PDP3YLR455W YFR006WP43590 535 aa7.23□□□□□ -1.25
PDP3YLR455W STS1P38637 319 aa7.22□□□□□ -1.25
PDP3YLR455W TIF11P38912 153 aaKnown RBP7.22□□□□□ -1.25
PDP3YLR455W VMA1P17255 1071 aaKnown RBP7.16□□□□□ -1.26
PDP3YLR455W MSB4Q12317 492 aa7.16□□□□□ -1.26
PDP3YLR455W ULI1P43604 169 aa7.15□□□□□ -1.26
PDP3YLR455W AIR2Q12476 344 aaKnown RBP7.15□□□□□ -1.26
PDP3YLR455W YOL036WQ08206 761 aa7.14□□□□□ -1.27
PDP3YLR455W SET4P42948 560 aa7.13□□□□□ -1.27
PDP3YLR455W FKH1P40466 484 aa7.12□□□□□ -1.27
PDP3YLR455W IOC2Q12072 812 aa7.12□□□□□ -1.27
PDP3YLR455W EAP1P36041 632 aaKnown RBP7.11□□□□□ -1.27
PDP3YLR455W SAM3Q08986 587 aa7.11□□□□□ -1.27
PDP3YLR455W LDB19Q12502 818 aa7.11□□□□□ -1.27
PDP3YLR455W YJL171CP46992 396 aa7.08□□□□□ -1.28
PDP3YLR455W RAM2P29703 316 aa7.07□□□□□ -1.28
PDP3YLR455W TRP5P00931 707 aaKnown RBP7.06□□□□□ -1.28
PDP3YLR455W MAK11P20484 414 aaKnown RBP7.04□□□□□ -1.28
PDP3YLR455W GYP5Q12344 894 aa7.03□□□□□ -1.28
PDP3YLR455W ABP1P15891 592 aaKnown RBP7□□□□□ -1.29
PDP3YLR455W RTG1P32607 177 aa7□□□□□ -1.29
PDP3YLR455W MIF2P35201 549 aa6.99□□□□□ -1.29
PDP3YLR455W YNL035CP53962 389 aaKnown RBP6.98□□□□□ -1.29
PDP3YLR455W DCW1P36091 449 aa6.97□□□□□ -1.29
PDP3YLR455W HTA1P04911 132 aaKnown RBP6.96□□□□□ -1.3
PDP3YLR455W HTA2P04912 132 aa6.96□□□□□ -1.3
PDP3YLR455W NCR1Q12200 1170 aa6.96□□□□□ -1.3
PDP3YLR455W SEC61P32915 480 aa6.95□□□□□ -1.3
PDP3YLR455W EDS1P38073 919 aa6.95□□□□□ -1.3
PDP3YLR455W GRE2Q12068 342 aaKnown RBP6.95□□□□□ -1.3
PDP3YLR455W BMT6Q12291 365 aa6.95□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms