RNA–Protein interactions for RNA: YLR435W

TSR2, Transcript of Protein with a potential role in pre-rRNA processing, yeastyeast

Gene TSR2, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR2YLR435W MTC1P47018 478 aaKnown RBP19.48■□□□□ 0.71
TSR2YLR435W DRS1P32892 752 aaKnown RBP18.29■□□□□ 0.52
TSR2YLR435W FAP1P53971 965 aa17.42■□□□□ 0.38
TSR2YLR435W PRI1P10363 409 aa16.35■□□□□ 0.21
TSR2YLR435W PRY3P47033 881 aa16.35■□□□□ 0.21
TSR2YLR435W AAD16Q02895 342 aa16.24■□□□□ 0.19
TSR2YLR435W ISW2Q08773 1120 aa16.14■□□□□ 0.17
TSR2YLR435W DIP2Q12220 943 aaPredicted RBP15.99■□□□□ 0.15
TSR2YLR435W RPG1P38249 964 aaKnown RBP15.94■□□□□ 0.14
TSR2YLR435W TSR3Q12094 313 aaKnown RBP15.45■□□□□ 0.06
TSR2YLR435W RSE1Q04693 1361 aaKnown RBP15.45■□□□□ 0.06
TSR2YLR435W AVT3P36062 692 aa15.43■□□□□ 0.06
TSR2YLR435W YCK3P39962 524 aa15.38■□□□□ 0.05
TSR2YLR435W HAA1Q12753 694 aaKnown RBP15.36■□□□□ 0.05
TSR2YLR435W BFR2Q06631 534 aaKnown RBP15.27■□□□□ 0.04
TSR2YLR435W RPL17AP05740 184 aaKnown RBP14.95□□□□□ -0.02
TSR2YLR435W RPL17BP46990 184 aaKnown RBP14.95□□□□□ -0.02
TSR2YLR435W REB1P21538 810 aa14.9□□□□□ -0.02
TSR2YLR435W MRPL32P25348 183 aa14.87□□□□□ -0.03
TSR2YLR435W SPT21P35209 758 aa14.3□□□□□ -0.12
TSR2YLR435W YGL015CP33199 130 aa14.23□□□□□ -0.13
TSR2YLR435W CDC27P38042 758 aa14.12□□□□□ -0.15
TSR2YLR435W YKR023WP36119 530 aaKnown RBP14.1□□□□□ -0.15
TSR2YLR435W RIM101P33400 625 aa13.82□□□□□ -0.2
TSR2YLR435W TFC8Q12308 588 aa13.82□□□□□ -0.2
TSR2YLR435W HOP09932 586 aa13.81□□□□□ -0.2
TSR2YLR435W UBP10P53874 792 aaPredicted RBP13.76□□□□□ -0.21
TSR2YLR435W DCD1P06773 312 aa13.74□□□□□ -0.21
TSR2YLR435W MAP2P38174 421 aaKnown RBP13.67□□□□□ -0.22
TSR2YLR435W TFA1P36100 482 aa13.47□□□□□ -0.25
TSR2YLR435W SCY1P53009 804 aa13.43□□□□□ -0.26
TSR2YLR435W BCH2P36122 765 aa13.36□□□□□ -0.27
TSR2YLR435W OXP1P28273 1286 aa13.33□□□□□ -0.28
TSR2YLR435W SLX5P32828 619 aaKnown RBP13.28□□□□□ -0.28
TSR2YLR435W TIF4632P39936 914 aaKnown RBP13.2□□□□□ -0.3
TSR2YLR435W YIL055CP40523 627 aaKnown RBP13.19□□□□□ -0.3
TSR2YLR435W PTP3P40048 928 aa13.17□□□□□ -0.3
TSR2YLR435W TGL3P40308 642 aa13.11□□□□□ -0.31
TSR2YLR435W EPS1P40557 701 aa13.06□□□□□ -0.32
TSR2YLR435W BUD31P25337 157 aaPredicted RBP12.99□□□□□ -0.33
TSR2YLR435W BDF1P35817 686 aa12.99□□□□□ -0.33
TSR2YLR435W YAH1Q12184 172 aaKnown RBP12.99□□□□□ -0.33
TSR2YLR435W MON2P48563 1636 aaPredicted RBP12.99□□□□□ -0.33
TSR2YLR435W RSM7P47150 247 aa12.98□□□□□ -0.33
TSR2YLR435W INO80P53115 1489 aa12.95□□□□□ -0.34
TSR2YLR435W BBC1P47068 1157 aa12.88□□□□□ -0.35
TSR2YLR435W AI2P03876 854 aa12.85□□□□□ -0.35
TSR2YLR435W YLR271WQ06152 274 aa12.76□□□□□ -0.37
TSR2YLR435W UBP9P39967 754 aa12.71□□□□□ -0.37
TSR2YLR435W SSP1P38871 571 aa12.65□□□□□ -0.38
TSR2YLR435W NSR1P27476 414 aaKnown RBP RIP-Chip data12.59□□□□□ -0.39 RIP-Chip
TSR2YLR435W ARP8Q12386 881 aaKnown RBP RIP-Chip data12.59□□□□□ -0.39not detected
TSR2YLR435W PSD2P53037 1138 aaKnown RBP12.57□□□□□ -0.4
TSR2YLR435W MST1P07236 462 aa12.55□□□□□ -0.4
TSR2YLR435W YOR238WQ08634 303 aa12.55□□□□□ -0.4
TSR2YLR435W SGS1P35187 1447 aa12.51□□□□□ -0.41
TSR2YLR435W TCB3Q03640 1545 aaKnown RBP12.5□□□□□ -0.41
TSR2YLR435W TY1B-DR4Q07793 1604 aa12.49□□□□□ -0.41
TSR2YLR435W YAP5P40574 245 aa12.49□□□□□ -0.41
TSR2YLR435W SWR1Q05471 1514 aa12.48□□□□□ -0.41
TSR2YLR435W MRM1P25270 412 aa12.39□□□□□ -0.43
TSR2YLR435W SIS1P25294 352 aaKnown RBP12.39□□□□□ -0.43
TSR2YLR435W DNA2P38859 1522 aa12.38□□□□□ -0.43
TSR2YLR435W MGA2P40578 1113 aa12.34□□□□□ -0.43
TSR2YLR435W YBL029C-AQ3E756 94 aa12.34□□□□□ -0.43
TSR2YLR435W CST9Q06032 482 aa12.32□□□□□ -0.44
TSR2YLR435W GTT3P39996 337 aa12.24□□□□□ -0.45
TSR2YLR435W VNX1P42839 908 aa12.22□□□□□ -0.45
TSR2YLR435W KOG1P38873 1557 aa12.21□□□□□ -0.46
TSR2YLR435W WSC3Q12215 556 aa12.19□□□□□ -0.46
TSR2YLR435W PIB1Q06651 286 aa12.18□□□□□ -0.46
TSR2YLR435W RTG3P38165 486 aa12.15□□□□□ -0.46
TSR2YLR435W SPP1Q03012 353 aa12.13□□□□□ -0.47
TSR2YLR435W HSL1P34244 1518 aa12.11□□□□□ -0.47
TSR2YLR435W VPS29P38759 282 aa12.1□□□□□ -0.47
TSR2YLR435W YMR1P47147 688 aaKnown RBP RIP-Chip data12.1□□□□□ -0.47not detected
TSR2YLR435W SPT6P23615 1451 aaKnown RBP12.08□□□□□ -0.47
TSR2YLR435W TIF11P38912 153 aaKnown RBP12.04□□□□□ -0.48
TSR2YLR435W DBP1P24784 617 aaKnown RBP12.03□□□□□ -0.48
TSR2YLR435W RCR1P38212 213 aa12□□□□□ -0.49
TSR2YLR435W YFR006WP43590 535 aa11.99□□□□□ -0.49
TSR2YLR435W SPA2P23201 1466 aaKnown RBP11.98□□□□□ -0.49
TSR2YLR435W STS1P38637 319 aa11.97□□□□□ -0.49
TSR2YLR435W MSB4Q12317 492 aa11.94□□□□□ -0.5
TSR2YLR435W VMA1P17255 1071 aaKnown RBP11.9□□□□□ -0.5
TSR2YLR435W ULI1P43604 169 aa11.9□□□□□ -0.5
TSR2YLR435W YOL036WQ08206 761 aa11.89□□□□□ -0.51
TSR2YLR435W HIR3P47171 1648 aa11.87□□□□□ -0.51
TSR2YLR435W EAP1P36041 632 aaKnown RBP11.86□□□□□ -0.51
TSR2YLR435W SET4P42948 560 aa11.86□□□□□ -0.51
TSR2YLR435W FKH1P40466 484 aa11.85□□□□□ -0.51
TSR2YLR435W LDB19Q12502 818 aa11.85□□□□□ -0.51
TSR2YLR435W IOC2Q12072 812 aa11.84□□□□□ -0.51
TSR2YLR435W SAM3Q08986 587 aa11.83□□□□□ -0.52
TSR2YLR435W AIR2Q12476 344 aaKnown RBP11.81□□□□□ -0.52
TSR2YLR435W TRP5P00931 707 aaKnown RBP11.75□□□□□ -0.53
TSR2YLR435W YJL171CP46992 396 aa11.73□□□□□ -0.53
TSR2YLR435W ECM5Q03214 1411 aa11.7□□□□□ -0.54
TSR2YLR435W RAM2P29703 316 aa11.69□□□□□ -0.54
TSR2YLR435W XRN1P22147 1528 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms